RNA–Protein interactions for RNA: ENST00000446987.5

DDX56-206, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-206ENST00000446987 LRP12Q9Y561 859 aa11.17□□□□□ -0.62
DDX56-206ENST00000446987 IGKV1D-42A0A075B6H8 117 aa11.16□□□□□ -0.62
DDX56-206ENST00000446987 A0A0A6YYD4 124 aa11.16□□□□□ -0.62
DDX56-206ENST00000446987 SERPINE3A8MV23 424 aa11.16□□□□□ -0.62
DDX56-206ENST00000446987 TMEM250H0YL14 139 aa11.16□□□□□ -0.62
DDX56-206ENST00000446987 ZIC3O60481 467 aa11.16□□□□□ -0.62
DDX56-206ENST00000446987 KBTBD11O94819 623 aa11.16□□□□□ -0.62
DDX56-206ENST00000446987 CD99P14209 185 aa11.16□□□□□ -0.62
DDX56-206ENST00000446987 B3GALT5-AS1P59052 145 aa11.16□□□□□ -0.62
DDX56-206ENST00000446987 KRTCAP3Q53RY4 240 aa11.16□□□□□ -0.62
DDX56-206ENST00000446987 LIAT1Q6ZQX7 453 aa11.16□□□□□ -0.62
DDX56-206ENST00000446987 LHFPL4Q7Z7J7 247 aa11.16□□□□□ -0.62
DDX56-206ENST00000446987 MYPOPQ86VE0 399 aaPredicted RBP11.16□□□□□ -0.62
DDX56-206ENST00000446987 LGI3Q8N145 548 aa11.16□□□□□ -0.62
DDX56-206ENST00000446987 CMTM2Q8TAZ6 248 aa11.16□□□□□ -0.62
DDX56-206ENST00000446987 NAA60Q9H7X0 242 aa11.16□□□□□ -0.62
DDX56-206ENST00000446987 RNF115Q9Y4L5 304 aa11.16□□□□□ -0.62
DDX56-206ENST00000446987 PXMP4Q9Y6I8 212 aa11.16□□□□□ -0.62
DDX56-206ENST00000446987 COL12A1Q99715 3063 aa11.16□□□□□ -0.62
DDX56-206ENST00000446987 NCOA6Q14686 2063 aaPredicted RBP11.16□□□□□ -0.62
DDX56-206ENST00000446987 VENTXO95231 258 aa11.15□□□□□ -0.62
DDX56-206ENST00000446987 DBHP09172 617 aa11.15□□□□□ -0.62
DDX56-206ENST00000446987 TMEM50BP56557 158 aa11.15□□□□□ -0.62
DDX56-206ENST00000446987 SRPXP78539 464 aa11.15□□□□□ -0.62
DDX56-206ENST00000446987 ARFRP1Q13795 201 aa11.15□□□□□ -0.62
DDX56-206ENST00000446987 TMEM41BQ5BJD5 291 aa11.15□□□□□ -0.62
DDX56-206ENST00000446987 WIPI1Q5MNZ9 446 aaPredicted RBP11.15□□□□□ -0.62
DDX56-206ENST00000446987 TCF24Q7RTU0 167 aa11.15□□□□□ -0.62
DDX56-206ENST00000446987 YRDCQ86U90 279 aaKnown RBP11.15□□□□□ -0.62
DDX56-206ENST00000446987 PNKDQ8N490 385 aa11.15□□□□□ -0.62
DDX56-206ENST00000446987 OR5L1Q8NGL2 311 aa11.15□□□□□ -0.62
DDX56-206ENST00000446987 OR5B3Q8NH48 314 aa11.15□□□□□ -0.62
DDX56-206ENST00000446987 BET1LQ9NYM9 111 aa11.15□□□□□ -0.62
DDX56-206ENST00000446987 AQP7O14520 342 aa11.15□□□□□ -0.63
DDX56-206ENST00000446987 H2BFMP0C1H6 154 aa11.15□□□□□ -0.63
DDX56-206ENST00000446987 UCP1P25874 307 aa11.15□□□□□ -0.63
DDX56-206ENST00000446987 SRD5A2P31213 254 aa11.15□□□□□ -0.63
DDX56-206ENST00000446987 GFRA1P56159 465 aa11.15□□□□□ -0.63
DDX56-206ENST00000446987 ERVS71-1P61550 626 aa11.15□□□□□ -0.63
DDX56-206ENST00000446987 C17orf67Q0P5P2 114 aa11.15□□□□□ -0.63
DDX56-206ENST00000446987 MMDQ15546 238 aa11.15□□□□□ -0.63
DDX56-206ENST00000446987 MPV17LQ2QL34 196 aa11.15□□□□□ -0.63
DDX56-206ENST00000446987 Q6ZWC4 215 aa11.15□□□□□ -0.63
DDX56-206ENST00000446987 KLHDC1Q8N7A1 406 aa11.15□□□□□ -0.63
DDX56-206ENST00000446987 OR5D14Q8NGL3 314 aa11.15□□□□□ -0.63
DDX56-206ENST00000446987 WDYHV1Q96HA8 205 aa11.15□□□□□ -0.63
DDX56-206ENST00000446987 GNG13Q9P2W3 67 aa11.15□□□□□ -0.63
DDX56-206ENST00000446987 B4GALT7Q9UBV7 327 aa11.15□□□□□ -0.63
DDX56-206ENST00000446987 ARHGAP21Q5T5U3 1957 aa11.14□□□□□ -0.63
DDX56-206ENST00000446987 PHF3Q92576 2039 aaKnown RBP11.14□□□□□ -0.63
DDX56-206ENST00000446987 TRGV5A0A0B4J1U4 118 aa11.14□□□□□ -0.63
DDX56-206ENST00000446987 SERINC4A6NH21 518 aa11.14□□□□□ -0.63
DDX56-206ENST00000446987 FOXI3A8MTJ6 420 aaPredicted RBP11.14□□□□□ -0.63
DDX56-206ENST00000446987 K7ERU9 68 aa11.14□□□□□ -0.63
DDX56-206ENST00000446987 XRCC2O43543 280 aa11.14□□□□□ -0.63
DDX56-206ENST00000446987 CD55P08174 381 aa11.14□□□□□ -0.63
DDX56-206ENST00000446987 TNFSF4P23510 183 aa11.14□□□□□ -0.63
DDX56-206ENST00000446987 C3AR1Q16581 482 aa11.14□□□□□ -0.63
DDX56-206ENST00000446987 C1orf174Q8IYL3 243 aa11.14□□□□□ -0.63
DDX56-206ENST00000446987 PPP1R14AQ96A00 147 aa11.14□□□□□ -0.63
DDX56-206ENST00000446987 GPR146Q96CH1 333 aa11.14□□□□□ -0.63
DDX56-206ENST00000446987 PGAM5Q96HS1 289 aa11.14□□□□□ -0.63
DDX56-206ENST00000446987 C1orf147Q96MC9 270 aaPredicted RBP11.14□□□□□ -0.63
DDX56-206ENST00000446987 TMEM59Q9BXS4 323 aa11.14□□□□□ -0.63
DDX56-206ENST00000446987 CST9LQ9H4G1 147 aa11.14□□□□□ -0.63
DDX56-206ENST00000446987 ZNF701Q9NV72 531 aaPredicted RBP11.14□□□□□ -0.63
DDX56-206ENST00000446987 PAM16Q9Y3D7 125 aa11.14□□□□□ -0.63
DDX56-206ENST00000446987 DUXBA0A1W2PPF3 345 aa11.13□□□□□ -0.63
DDX56-206ENST00000446987 IGSF23A1L1A6 192 aa11.13□□□□□ -0.63
DDX56-206ENST00000446987 SHISA8B8ZZ34 492 aa11.13□□□□□ -0.63
DDX56-206ENST00000446987 LILRA1O75019 489 aa11.13□□□□□ -0.63
DDX56-206ENST00000446987 RAD51DO75771 328 aa11.13□□□□□ -0.63
DDX56-206ENST00000446987 OR6A2O95222 327 aa11.13□□□□□ -0.63
DDX56-206ENST00000446987 BGLAPP02818 100 aa11.13□□□□□ -0.63
DDX56-206ENST00000446987 TUBG1P23258 451 aa11.13□□□□□ -0.63
DDX56-206ENST00000446987 ZNF93P35789 620 aaPredicted RBP11.13□□□□□ -0.63
DDX56-206ENST00000446987 HNRNPA3P51991 378 aaKnown RBP11.13□□□□□ -0.63
DDX56-206ENST00000446987 DSCR4P56555 118 aaPredicted RBP11.13□□□□□ -0.63
DDX56-206ENST00000446987 CLDN18P56856 261 aa11.13□□□□□ -0.63
DDX56-206ENST00000446987 RPL23P62829 140 aaKnown RBP11.13□□□□□ -0.63
DDX56-206ENST00000446987 RPL18Q07020 188 aaKnown RBP11.13□□□□□ -0.63
DDX56-206ENST00000446987 PLPPR5Q32ZL2 321 aa11.13□□□□□ -0.63
DDX56-206ENST00000446987 ZNF787Q6DD87 383 aa11.13□□□□□ -0.63
DDX56-206ENST00000446987 RPRMLQ8N4K4 120 aa11.13□□□□□ -0.63
DDX56-206ENST00000446987 TMEM252Q8N6L7 170 aa11.13□□□□□ -0.63
DDX56-206ENST00000446987 FAM57AQ8TBR7 257 aa11.13□□□□□ -0.63
DDX56-206ENST00000446987 SLAMF6Q96DU3 332 aa11.13□□□□□ -0.63
DDX56-206ENST00000446987 SPIN2AQ99865 258 aa11.13□□□□□ -0.63
DDX56-206ENST00000446987 SPIN2BQ9BPZ2 258 aa11.13□□□□□ -0.63
DDX56-206ENST00000446987 SMIM7Q9BQ49 75 aa11.13□□□□□ -0.63
DDX56-206ENST00000446987 NICN1Q9BSH3 213 aa11.13□□□□□ -0.63
DDX56-206ENST00000446987 IGLV1-36A0A0B4J1U3 117 aa11.12□□□□□ -0.63
DDX56-206ENST00000446987 SOCS1O15524 211 aa11.12□□□□□ -0.63
DDX56-206ENST00000446987 TRAPPC6AO75865 159 aa11.12□□□□□ -0.63
DDX56-206ENST00000446987 CTXN2P0C2S0 81 aa11.12□□□□□ -0.63
DDX56-206ENST00000446987 IGLC2P0DOY2 106 aa11.12□□□□□ -0.63
DDX56-206ENST00000446987 IGLC3P0DOY3 106 aa11.12□□□□□ -0.63
DDX56-206ENST00000446987 CA7P43166 264 aa11.12□□□□□ -0.63
DDX56-206ENST00000446987 COMPP49747 757 aaPredicted RBP11.12□□□□□ -0.63
DDX56-206ENST00000446987 YPEL3P61236 119 aaPredicted RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms