RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 PAX6P26367 422 aa13.96□□□□□ -0.17
LIME1-202ENST00000444951 DYRK1AQ13627 763 aa13.96□□□□□ -0.17
LIME1-202ENST00000444951 HLA-DRB5Q30154 266 aa13.96□□□□□ -0.17
LIME1-202ENST00000444951 OVCH2Q7RTZ1 564 aa13.96□□□□□ -0.17
LIME1-202ENST00000444951 BCL6BQ8N143 479 aaPredicted RBP13.96□□□□□ -0.17
LIME1-202ENST00000444951 LYG1Q8N1E2 194 aa13.96□□□□□ -0.17
LIME1-202ENST00000444951 PIP4P2Q8N4L2 257 aa13.96□□□□□ -0.17
LIME1-202ENST00000444951 TEX29Q8N6K0 151 aa13.96□□□□□ -0.17
LIME1-202ENST00000444951 OR4P4Q8NGL7 312 aa13.96□□□□□ -0.17
LIME1-202ENST00000444951 OR4C16Q8NGL9 310 aa13.96□□□□□ -0.17
LIME1-202ENST00000444951 OR56B4Q8NH76 319 aa13.96□□□□□ -0.17
LIME1-202ENST00000444951 C17orf50Q8WW18 174 aa13.96□□□□□ -0.17
LIME1-202ENST00000444951 EDARADDQ8WWZ3 215 aa13.96□□□□□ -0.17
LIME1-202ENST00000444951 CREB3L1Q96BA8 519 aa13.96□□□□□ -0.17
LIME1-202ENST00000444951 ABHD14BQ96IU4 210 aa13.96□□□□□ -0.17
LIME1-202ENST00000444951 ZNF2Q9BSG1 426 aaPredicted RBP13.96□□□□□ -0.17
LIME1-202ENST00000444951 MCUBQ9NWR8 336 aa13.96□□□□□ -0.17
LIME1-202ENST00000444951 CMYA5Q8N3K9 4069 aa13.95□□□□□ -0.18
LIME1-202ENST00000444951 DIRAS3O95661 229 aa13.95□□□□□ -0.18
LIME1-202ENST00000444951 FSHBP01225 129 aa13.95□□□□□ -0.18
LIME1-202ENST00000444951 IGLV1-47P01700 117 aa13.95□□□□□ -0.18
LIME1-202ENST00000444951 TBPP20226 339 aa13.95□□□□□ -0.18
LIME1-202ENST00000444951 HTR1DP28221 377 aa13.95□□□□□ -0.18
LIME1-202ENST00000444951 CD40LGP29965 261 aa13.95□□□□□ -0.18
LIME1-202ENST00000444951 AP3S2P59780 193 aa13.95□□□□□ -0.18
LIME1-202ENST00000444951 HERV-K104P61576 105 aa13.95□□□□□ -0.18
LIME1-202ENST00000444951 KLF9Q13886 244 aaPredicted RBP13.95□□□□□ -0.18
LIME1-202ENST00000444951 SCGB2B2Q4G0G5 96 aa13.95□□□□□ -0.18
LIME1-202ENST00000444951 PLA1AQ53H76 456 aa13.95□□□□□ -0.18
LIME1-202ENST00000444951 SLC25A48Q6ZT89 311 aaKnown RBP13.95□□□□□ -0.18
LIME1-202ENST00000444951 BEND2Q8NDZ0 799 aa13.95□□□□□ -0.18
LIME1-202ENST00000444951 OR6F1Q8NGZ6 308 aa13.95□□□□□ -0.18
LIME1-202ENST00000444951 SLC6A7Q99884 636 aa13.95□□□□□ -0.18
LIME1-202ENST00000444951 CCDC32Q9BV29 185 aa13.95□□□□□ -0.18
LIME1-202ENST00000444951 ZNF107Q9UII5 783 aaPredicted RBP13.95□□□□□ -0.18
LIME1-202ENST00000444951 AMMECR1Q9Y4X0 333 aaPredicted RBP13.95□□□□□ -0.18
LIME1-202ENST00000444951 HILPDAQ9Y5L2 63 aa13.95□□□□□ -0.18
LIME1-202ENST00000444951 A0A0U1RQK1 487 aa13.94□□□□□ -0.18
LIME1-202ENST00000444951 BUB1B-PAK6H3BSN5 160 aa13.94□□□□□ -0.18
LIME1-202ENST00000444951 PPYP01298 95 aa13.94□□□□□ -0.18
LIME1-202ENST00000444951 CD74P04233 296 aa13.94□□□□□ -0.18
LIME1-202ENST00000444951 REG1BP48304 166 aa13.94□□□□□ -0.18
LIME1-202ENST00000444951 LUMP51884 338 aaPredicted RBP13.94□□□□□ -0.18
LIME1-202ENST00000444951 MEF2DQ14814 521 aa13.94□□□□□ -0.18
LIME1-202ENST00000444951 MIDNQ504T8 468 aa13.94□□□□□ -0.18
LIME1-202ENST00000444951 VAX1Q5SQQ9 334 aa13.94□□□□□ -0.18
LIME1-202ENST00000444951 LDLRAD2Q5SZI1 272 aa13.94□□□□□ -0.18
LIME1-202ENST00000444951 C12orf54Q6X4T0 127 aa13.94□□□□□ -0.18
LIME1-202ENST00000444951 TMEM17Q86X19 198 aa13.94□□□□□ -0.18
LIME1-202ENST00000444951 SECTM1Q8WVN6 248 aa13.94□□□□□ -0.18
LIME1-202ENST00000444951 TOMM40LQ969M1 308 aa13.94□□□□□ -0.18
LIME1-202ENST00000444951 OR2D2Q9H210 308 aa13.94□□□□□ -0.18
LIME1-202ENST00000444951 ZNF221Q9UK13 617 aa13.94□□□□□ -0.18
LIME1-202ENST00000444951 FAM96BQ9Y3D0 163 aa13.94□□□□□ -0.18
LIME1-202ENST00000444951 OR2W1Q9Y3N9 320 aa13.94□□□□□ -0.18
LIME1-202ENST00000444951 TRRAPQ9Y4A5 3859 aa13.94□□□□□ -0.18
LIME1-202ENST00000444951 A0A0A6YYJ9 748 aa13.93□□□□□ -0.18
LIME1-202ENST00000444951 IGKV1D-13A0A0B4J2D9 117 aa13.93□□□□□ -0.18
LIME1-202ENST00000444951 MDFIC2A0A1B0GVS7 189 aa13.93□□□□□ -0.18
LIME1-202ENST00000444951 DISC1C4P0D8 188 aa13.93□□□□□ -0.18
LIME1-202ENST00000444951 IGKV1-13P0DP09 117 aa13.93□□□□□ -0.18
LIME1-202ENST00000444951 IL3RAP26951 378 aa13.93□□□□□ -0.18
LIME1-202ENST00000444951 GPR12P47775 334 aa13.93□□□□□ -0.18
LIME1-202ENST00000444951 RAB7AP51149 207 aa13.93□□□□□ -0.18
LIME1-202ENST00000444951 DIAPH2-AS1Q14236 149 aa13.93□□□□□ -0.18
LIME1-202ENST00000444951 SSX2Q16385 188 aa13.93□□□□□ -0.18
LIME1-202ENST00000444951 Q3ZCU0 254 aa13.93□□□□□ -0.18
LIME1-202ENST00000444951 LINC00311Q8N616 119 aa13.93□□□□□ -0.18
LIME1-202ENST00000444951 C8orf31Q8N9H6 132 aa13.93□□□□□ -0.18
LIME1-202ENST00000444951 GIMAP1Q8WWP7 306 aa13.93□□□□□ -0.18
LIME1-202ENST00000444951 IFI27L2Q9H2X8 130 aa13.93□□□□□ -0.18
LIME1-202ENST00000444951 HRASLSQ9HDD0 168 aa13.93□□□□□ -0.18
LIME1-202ENST00000444951 DPM3Q9P2X0 92 aa13.93□□□□□ -0.18
LIME1-202ENST00000444951 LEUTXA8MZ59 168 aa13.92□□□□□ -0.18
LIME1-202ENST00000444951 HSD17B6O14756 317 aa13.92□□□□□ -0.18
LIME1-202ENST00000444951 TUSC2O75896 110 aa13.92□□□□□ -0.18
LIME1-202ENST00000444951 FAUP35544 74 aaKnown RBP13.92□□□□□ -0.18
LIME1-202ENST00000444951 CEACAM3P40198 252 aa13.92□□□□□ -0.18
LIME1-202ENST00000444951 HILS1P60008 231 aa13.92□□□□□ -0.18
LIME1-202ENST00000444951 RPL39P5Q59GN2 51 aa13.92□□□□□ -0.18
LIME1-202ENST00000444951 LY6G6FQ5SQ64 297 aa13.92□□□□□ -0.18
LIME1-202ENST00000444951 TPTE2P1Q5T6R2 138 aa13.92□□□□□ -0.18
LIME1-202ENST00000444951 DHRS11Q6UWP2 260 aa13.92□□□□□ -0.18
LIME1-202ENST00000444951 LDLRAD3Q86YD5 345 aa13.92□□□□□ -0.18
LIME1-202ENST00000444951 OR51S1Q8NGJ8 323 aa13.92□□□□□ -0.18
LIME1-202ENST00000444951 RPEQ96AT9 228 aa13.92□□□□□ -0.18
LIME1-202ENST00000444951 SLC5A7Q9GZV3 580 aa13.92□□□□□ -0.18
LIME1-202ENST00000444951 TOLLIPQ9H0E2 274 aa13.92□□□□□ -0.18
LIME1-202ENST00000444951 TBL2Q9Y4P3 447 aaKnown RBP13.92□□□□□ -0.18
LIME1-202ENST00000444951 SAA2-SAA4A0A096LPE2 208 aa13.91□□□□□ -0.18
LIME1-202ENST00000444951 UPK1BO75841 260 aa13.91□□□□□ -0.18
LIME1-202ENST00000444951 ZNF735P0CB33 412 aa13.91□□□□□ -0.18
LIME1-202ENST00000444951 SAA2P0DJI9 122 aaPredicted RBP13.91□□□□□ -0.18
LIME1-202ENST00000444951 DEFB112Q30KQ8 113 aa13.91□□□□□ -0.18
LIME1-202ENST00000444951 MINOS1Q5TGZ0 78 aa13.91□□□□□ -0.18
LIME1-202ENST00000444951 ZNF660Q6AZW8 331 aaPredicted RBP13.91□□□□□ -0.18
LIME1-202ENST00000444951 ODF3L1Q8IXM7 274 aa13.91□□□□□ -0.18
LIME1-202ENST00000444951 DYNAPQ8N1N2 210 aa13.91□□□□□ -0.18
LIME1-202ENST00000444951 ARRDC1Q8N5I2 433 aa13.91□□□□□ -0.18
LIME1-202ENST00000444951 ZNF418Q8TF45 676 aaPredicted RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms