RNA–Protein interactions for RNA: ENST00000444177.1

TREX1-202, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,200 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-202ENST00000444177 A0A075B6Q4 140 aa11.12□□□□□ -0.63
TREX1-202ENST00000444177 TRBV6-6A0A0A6YYG2 114 aa11.12□□□□□ -0.63
TREX1-202ENST00000444177 A0A0A6YYH2 397 aa11.12□□□□□ -0.63
TREX1-202ENST00000444177 A6NJ64 397 aa11.12□□□□□ -0.63
TREX1-202ENST00000444177 NOL3O60936 208 aaKnown RBP11.12□□□□□ -0.63
TREX1-202ENST00000444177 MOGAT2Q3SYC2 334 aa11.12□□□□□ -0.63
TREX1-202ENST00000444177 PLAC9Q5JTB6 97 aa11.12□□□□□ -0.63
TREX1-202ENST00000444177 IDNKQ5T6J7 187 aa11.12□□□□□ -0.63
TREX1-202ENST00000444177 STEAP3Q658P3 488 aa11.12□□□□□ -0.63
TREX1-202ENST00000444177 OR2AK2Q8NG84 335 aa11.12□□□□□ -0.63
TREX1-202ENST00000444177 OR2T10Q8NGZ9 312 aa11.12□□□□□ -0.63
TREX1-202ENST00000444177 LGALS14Q8TCE9 139 aa11.12□□□□□ -0.63
TREX1-202ENST00000444177 RAB3CQ96E17 227 aa11.12□□□□□ -0.63
TREX1-202ENST00000444177 EAF1Q96JC9 268 aaPredicted RBP11.12□□□□□ -0.63
TREX1-202ENST00000444177 DCSTAMPQ9H295 470 aa11.12□□□□□ -0.63
TREX1-202ENST00000444177 A0A1W2PRX2 142 aa11.11□□□□□ -0.63
TREX1-202ENST00000444177 NCBP2LA6PVI3 153 aaKnown RBP11.11□□□□□ -0.63
TREX1-202ENST00000444177 ZNF736B4DX44 427 aaPredicted RBP11.11□□□□□ -0.63
TREX1-202ENST00000444177 RAB27BO00194 218 aa11.11□□□□□ -0.63
TREX1-202ENST00000444177 ST8SIA5O15466 376 aa11.11□□□□□ -0.63
TREX1-202ENST00000444177 FGF16O43320 207 aa11.11□□□□□ -0.63
TREX1-202ENST00000444177 LANCL1O43813 399 aa11.11□□□□□ -0.63
TREX1-202ENST00000444177 CD3GP09693 182 aa11.11□□□□□ -0.63
TREX1-202ENST00000444177 SNRPBP14678 240 aaKnown RBP11.11□□□□□ -0.63
TREX1-202ENST00000444177 CD1BP29016 333 aa11.11□□□□□ -0.63
TREX1-202ENST00000444177 RORCP51449 518 aa11.11□□□□□ -0.63
TREX1-202ENST00000444177 TCTEX1D4Q5JR98 221 aa11.11□□□□□ -0.63
TREX1-202ENST00000444177 OR10R2Q8NGX6 335 aa11.11□□□□□ -0.63
TREX1-202ENST00000444177 ACOT12Q8WYK0 555 aa11.11□□□□□ -0.63
TREX1-202ENST00000444177 CMTM3Q96MX0 182 aa11.11□□□□□ -0.63
TREX1-202ENST00000444177 Q9N2K0 584 aa11.11□□□□□ -0.63
TREX1-202ENST00000444177 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.11□□□□□ -0.63
TREX1-202ENST00000444177 RHBDL2Q9NX52 303 aa11.11□□□□□ -0.63
TREX1-202ENST00000444177 SLC23A1Q9UHI7 598 aa11.11□□□□□ -0.63
TREX1-202ENST00000444177 MGAT4AQ9UM21 535 aa11.11□□□□□ -0.63
TREX1-202ENST00000444177 TCRBV4S1A1TA0A5B7 111 aa11.1□□□□□ -0.63
TREX1-202ENST00000444177 SERPINE3A8MV23 424 aa11.1□□□□□ -0.63
TREX1-202ENST00000444177 HSPA12AO43301 675 aa11.1□□□□□ -0.63
TREX1-202ENST00000444177 MOSP00540 346 aa11.1□□□□□ -0.63
TREX1-202ENST00000444177 HIST1H1DP16402 221 aaKnown RBP11.1□□□□□ -0.63
TREX1-202ENST00000444177 GNB3P16520 340 aa11.1□□□□□ -0.63
TREX1-202ENST00000444177 LSAMPQ13449 338 aa11.1□□□□□ -0.63
TREX1-202ENST00000444177 EBI3Q14213 229 aa11.1□□□□□ -0.63
TREX1-202ENST00000444177 LY6G6FQ5SQ64 297 aa11.1□□□□□ -0.63
TREX1-202ENST00000444177 ODF3L1Q8IXM7 274 aa11.1□□□□□ -0.63
TREX1-202ENST00000444177 WFDC9Q8NEX5 89 aa11.1□□□□□ -0.63
TREX1-202ENST00000444177 AP3S1Q92572 193 aa11.1□□□□□ -0.63
TREX1-202ENST00000444177 RBMXL1Q96E39 390 aaKnown RBP11.1□□□□□ -0.63
TREX1-202ENST00000444177 MRPL20Q9BYC9 149 aaKnown RBP11.1□□□□□ -0.63
TREX1-202ENST00000444177 ATG5Q9H1Y0 275 aa11.1□□□□□ -0.63
TREX1-202ENST00000444177 ABCG5Q9H222 651 aa11.1□□□□□ -0.63
TREX1-202ENST00000444177 IFI27L2Q9H2X8 130 aa11.1□□□□□ -0.63
TREX1-202ENST00000444177 OR1A1Q9P1Q5 309 aa11.1□□□□□ -0.63
TREX1-202ENST00000444177 SAA2-SAA4A0A096LPE2 208 aa11.09□□□□□ -0.63
TREX1-202ENST00000444177 ZNF701M0R085 212 aaPredicted RBP11.09□□□□□ -0.63
TREX1-202ENST00000444177 MFNGO00587 321 aa11.09□□□□□ -0.63
TREX1-202ENST00000444177 SCTP09683 121 aa11.09□□□□□ -0.63
TREX1-202ENST00000444177 SAA2P0DJI9 122 aaPredicted RBP11.09□□□□□ -0.63
TREX1-202ENST00000444177 ZNF182P17025 639 aaPredicted RBP11.09□□□□□ -0.63
TREX1-202ENST00000444177 ZBTB25P24278 435 aa11.09□□□□□ -0.63
TREX1-202ENST00000444177 OR3A3P47888 321 aa11.09□□□□□ -0.63
TREX1-202ENST00000444177 KHDC1LQ5JSQ8 128 aa11.09□□□□□ -0.63
TREX1-202ENST00000444177 ZNF833PQ6ZTB9 187 aa11.09□□□□□ -0.63
TREX1-202ENST00000444177 REC114Q7Z4M0 266 aa11.09□□□□□ -0.63
TREX1-202ENST00000444177 Q8N6K4 173 aa11.09□□□□□ -0.63
TREX1-202ENST00000444177 OR4X2Q8NGF9 303 aa11.09□□□□□ -0.63
TREX1-202ENST00000444177 OR5H6Q8NGV6 325 aa11.09□□□□□ -0.63
TREX1-202ENST00000444177 PHF21AQ96BD5 680 aa11.09□□□□□ -0.63
TREX1-202ENST00000444177 ISOC1Q96CN7 298 aa11.09□□□□□ -0.63
TREX1-202ENST00000444177 SLC25A38Q96DW6 304 aa11.09□□□□□ -0.63
TREX1-202ENST00000444177 PARP12Q9H0J9 701 aaKnown RBP11.09□□□□□ -0.63
TREX1-202ENST00000444177 KCNK7Q9Y2U2 307 aa11.09□□□□□ -0.63
TREX1-202ENST00000444177 CEPT1Q9Y6K0 416 aa11.09□□□□□ -0.63
TREX1-202ENST00000444177 TRDCB7Z8K6 153 aa11.08□□□□□ -0.64
TREX1-202ENST00000444177 H3BMQ9 156 aa11.08□□□□□ -0.64
TREX1-202ENST00000444177 FCGR3AP08637 254 aa11.08□□□□□ -0.64
TREX1-202ENST00000444177 GSTP1P09211 210 aaKnown RBP11.08□□□□□ -0.64
TREX1-202ENST00000444177 SOX6P35712 828 aa11.08□□□□□ -0.64
TREX1-202ENST00000444177 CEACAM6P40199 344 aa11.08□□□□□ -0.64
TREX1-202ENST00000444177 ARFRP1Q13795 201 aa11.08□□□□□ -0.64
TREX1-202ENST00000444177 UBE2NLQ5JXB2 153 aa11.08□□□□□ -0.64
TREX1-202ENST00000444177 C10orf99Q6UWK7 81 aa11.08□□□□□ -0.64
TREX1-202ENST00000444177 SLC35E3Q7Z769 313 aa11.08□□□□□ -0.64
TREX1-202ENST00000444177 Q8N9W7 124 aa11.08□□□□□ -0.64
TREX1-202ENST00000444177 EDARADDQ8WWZ3 215 aa11.08□□□□□ -0.64
TREX1-202ENST00000444177 MAFIPQ8WZ33 124 aa11.08□□□□□ -0.64
TREX1-202ENST00000444177 RASL11BQ9BPW5 248 aa11.08□□□□□ -0.64
TREX1-202ENST00000444177 NABP2Q9BQ15 211 aa11.08□□□□□ -0.64
TREX1-202ENST00000444177 RBM38Q9H0Z9 239 aaKnown RBP11.08□□□□□ -0.64
TREX1-202ENST00000444177 LIN7CQ9NUP9 197 aaKnown RBP11.08□□□□□ -0.64
TREX1-202ENST00000444177 PIPOXQ9P0Z9 390 aa11.08□□□□□ -0.64
TREX1-202ENST00000444177 TSSC4Q9Y5U2 329 aaPredicted RBP11.08□□□□□ -0.64
TREX1-202ENST00000444177 PSMB11A5LHX3 300 aa11.07□□□□□ -0.64
TREX1-202ENST00000444177 RAB29O14966 203 aa11.07□□□□□ -0.64
TREX1-202ENST00000444177 FABP7O15540 132 aa11.07□□□□□ -0.64
TREX1-202ENST00000444177 PF4V1P10720 104 aa11.07□□□□□ -0.64
TREX1-202ENST00000444177 CD33P20138 364 aa11.07□□□□□ -0.64
TREX1-202ENST00000444177 TALDO1P37837 337 aa11.07□□□□□ -0.64
TREX1-202ENST00000444177 PITPNAQ00169 270 aa11.07□□□□□ -0.64
TREX1-202ENST00000444177 SPCS2Q15005 226 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms