RNA–Protein interactions for RNA: ENST00000443621.1

LINC00393-201, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 282 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-201ENST00000443621 GGNBP1Q5YKI7 109 aa2.35□□□□□ -2.03
LINC00393-201ENST00000443621 C11orf71Q6IPW1 123 aa2.35□□□□□ -2.03
LINC00393-201ENST00000443621 UQCC3Q6UW78 93 aa2.35□□□□□ -2.03
LINC00393-201ENST00000443621 DPPA3Q6W0C5 159 aa2.35□□□□□ -2.03
LINC00393-201ENST00000443621 ZNF818PQ6ZRF7 136 aa2.35□□□□□ -2.03
LINC00393-201ENST00000443621 SLC25A48Q6ZT89 311 aaKnown RBP2.35□□□□□ -2.03
LINC00393-201ENST00000443621 C22orf34Q6ZV56 151 aa2.35□□□□□ -2.03
LINC00393-201ENST00000443621 HSD17B13Q7Z5P4 300 aaPredicted RBP2.35□□□□□ -2.03
LINC00393-201ENST00000443621 CENPVQ7Z7K6 275 aaPredicted RBP2.35□□□□□ -2.03
LINC00393-201ENST00000443621 TBC1D26Q86UD7 250 aa2.35□□□□□ -2.03
LINC00393-201ENST00000443621 MOGAT3Q86VF5 341 aa2.35□□□□□ -2.03
LINC00393-201ENST00000443621 LRP11Q86VZ4 500 aa2.35□□□□□ -2.03
LINC00393-201ENST00000443621 FOXRED2Q8IWF2 684 aa2.35□□□□□ -2.03
LINC00393-201ENST00000443621 BAP18Q8IXM2 172 aa2.35□□□□□ -2.03
LINC00393-201ENST00000443621 PDZD9Q8IXQ8 264 aa2.35□□□□□ -2.03
LINC00393-201ENST00000443621 DMRTC2Q8IXT2 367 aaPredicted RBP2.35□□□□□ -2.03
LINC00393-201ENST00000443621 SELENOHQ8IZQ5 122 aaKnown RBP2.35□□□□□ -2.03
LINC00393-201ENST00000443621 OR2C3Q8N628 320 aa2.35□□□□□ -2.03
LINC00393-201ENST00000443621 DRAM1Q8N682 238 aa2.35□□□□□ -2.03
LINC00393-201ENST00000443621 CD177Q8N6Q3 437 aa2.35□□□□□ -2.03
LINC00393-201ENST00000443621 KIR3DL3Q8N743 410 aa2.35□□□□□ -2.03
LINC00393-201ENST00000443621 BEND2Q8NDZ0 799 aa2.35□□□□□ -2.03
LINC00393-201ENST00000443621 LFNGQ8NES3 379 aa2.35□□□□□ -2.03
LINC00393-201ENST00000443621 OR5T2Q8NGG2 359 aa2.35□□□□□ -2.03
LINC00393-201ENST00000443621 OR52B4Q8NGK2 314 aa2.35□□□□□ -2.03
LINC00393-201ENST00000443621 OR4A5Q8NH83 315 aa2.35□□□□□ -2.03
LINC00393-201ENST00000443621 LYPD6BQ8NI32 183 aa2.35□□□□□ -2.03
LINC00393-201ENST00000443621 VSTM2AQ8TAG5 236 aa2.35□□□□□ -2.03
LINC00393-201ENST00000443621 OSR1Q8TAX0 266 aaPredicted RBP2.35□□□□□ -2.03
LINC00393-201ENST00000443621 PLPPR1Q8TBJ4 325 aa2.35□□□□□ -2.03
LINC00393-201ENST00000443621 SECTM1Q8WVN6 248 aa2.35□□□□□ -2.03
LINC00393-201ENST00000443621 ITLN1Q8WWA0 313 aa2.35□□□□□ -2.03
LINC00393-201ENST00000443621 RAB1CQ92928 201 aa2.35□□□□□ -2.03
LINC00393-201ENST00000443621 ARL11Q969Q4 196 aa2.35□□□□□ -2.03
LINC00393-201ENST00000443621 GNPNAT1Q96EK6 184 aaPredicted RBP2.35□□□□□ -2.03
LINC00393-201ENST00000443621 PLPPR2Q96GM1 343 aa2.35□□□□□ -2.03
LINC00393-201ENST00000443621 TIMD4Q96H15 378 aa2.35□□□□□ -2.03
LINC00393-201ENST00000443621 EAF1Q96JC9 268 aaPredicted RBP2.35□□□□□ -2.03
LINC00393-201ENST00000443621 SMIM8Q96KF7 97 aa2.35□□□□□ -2.03
LINC00393-201ENST00000443621 OR10C1Q96KK4 312 aa2.35□□□□□ -2.03
LINC00393-201ENST00000443621 S1PR3Q99500 378 aa2.35□□□□□ -2.03
LINC00393-201ENST00000443621 HDHD3Q9BSH5 251 aaPredicted RBP2.35□□□□□ -2.03
LINC00393-201ENST00000443621 ARL6Q9H0F7 186 aa2.35□□□□□ -2.03
LINC00393-201ENST00000443621 C11orf1Q9H5F2 150 aa2.35□□□□□ -2.03
LINC00393-201ENST00000443621 CHODLQ9H9P2 273 aa2.35□□□□□ -2.03
LINC00393-201ENST00000443621 MSL2Q9HCI7 577 aa2.35□□□□□ -2.03
LINC00393-201ENST00000443621 OR2S2Q9NQN1 319 aa2.35□□□□□ -2.03
LINC00393-201ENST00000443621 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.35□□□□□ -2.03
LINC00393-201ENST00000443621 LYRM2Q9NU23 88 aaPredicted RBP2.35□□□□□ -2.03
LINC00393-201ENST00000443621 GFOD1Q9NXC2 390 aa2.35□□□□□ -2.03
LINC00393-201ENST00000443621 RDH8Q9NYR8 311 aa2.35□□□□□ -2.03
LINC00393-201ENST00000443621 CALYQ9NYX4 217 aa2.35□□□□□ -2.03
LINC00393-201ENST00000443621 IDI2-AS1Q9NZ38 188 aa2.35□□□□□ -2.03
LINC00393-201ENST00000443621 CISD1Q9NZ45 108 aaKnown RBP2.35□□□□□ -2.03
LINC00393-201ENST00000443621 CRIM1Q9NZV1 1036 aa2.35□□□□□ -2.03
LINC00393-201ENST00000443621 HSPB7Q9UBY9 170 aa2.35□□□□□ -2.03
LINC00393-201ENST00000443621 ZMAT5Q9UDW3 170 aaKnown RBP2.35□□□□□ -2.03
LINC00393-201ENST00000443621 PFDN2Q9UHV9 154 aa2.35□□□□□ -2.03
LINC00393-201ENST00000443621 RPUSD1Q9UJJ7 312 aaKnown RBP2.35□□□□□ -2.03
LINC00393-201ENST00000443621 ZNF257Q9Y2Q1 563 aa2.35□□□□□ -2.03
LINC00393-201ENST00000443621 POLR3KQ9Y2Y1 108 aaPredicted RBP2.35□□□□□ -2.03
LINC00393-201ENST00000443621 CEP295Q9C0D2 2601 aa2.35□□□□□ -2.03
LINC00393-201ENST00000443621 RAI1Q7Z5J4 1906 aaPredicted RBP2.34□□□□□ -2.03
LINC00393-201ENST00000443621 BORCS7-ASMTA0A0B4J1R7 106 aa2.34□□□□□ -2.03
LINC00393-201ENST00000443621 IGKV1D-13A0A0B4J2D9 117 aa2.34□□□□□ -2.03
LINC00393-201ENST00000443621 IGHV1-69-2A0A0G2JMI3 117 aa2.34□□□□□ -2.03
LINC00393-201ENST00000443621 A0A1B0GW64 132 aa2.34□□□□□ -2.03
LINC00393-201ENST00000443621 A6NNC1 897 aa2.34□□□□□ -2.03
LINC00393-201ENST00000443621 KIAA1324LA8MWY0 1029 aaPredicted RBP2.34□□□□□ -2.03
LINC00393-201ENST00000443621 A8MXK9 166 aa2.34□□□□□ -2.03
LINC00393-201ENST00000443621 B8ZZF3 427 aa2.34□□□□□ -2.03
LINC00393-201ENST00000443621 F5H0A9 414 aaPredicted RBP2.34□□□□□ -2.03
LINC00393-201ENST00000443621 H0YIZ8 118 aa2.34□□□□□ -2.03
LINC00393-201ENST00000443621 TEX46H3BTG2 121 aa2.34□□□□□ -2.03
LINC00393-201ENST00000443621 M0R1W7 72 aa2.34□□□□□ -2.03
LINC00393-201ENST00000443621 SIRPB1O00241 398 aa2.34□□□□□ -2.03
LINC00393-201ENST00000443621 SPRY3O43610 288 aa2.34□□□□□ -2.03
LINC00393-201ENST00000443621 SYNGR2O43760 224 aa2.34□□□□□ -2.03
LINC00393-201ENST00000443621 MPDU1O75352 247 aa2.34□□□□□ -2.03
LINC00393-201ENST00000443621 CLDN1O95832 211 aa2.34□□□□□ -2.03
LINC00393-201ENST00000443621 F12P00748 615 aaPredicted RBP2.34□□□□□ -2.03
LINC00393-201ENST00000443621 MBP02144 154 aa2.34□□□□□ -2.03
LINC00393-201ENST00000443621 HOXB5P09067 269 aa2.34□□□□□ -2.03
LINC00393-201ENST00000443621 OR8U9P0C7N5 309 aa2.34□□□□□ -2.03
LINC00393-201ENST00000443621 IGKV1-13P0DP09 117 aa2.34□□□□□ -2.03
LINC00393-201ENST00000443621 HKR1P10072 659 aa2.34□□□□□ -2.03
LINC00393-201ENST00000443621 CXCL2P19875 107 aa2.34□□□□□ -2.03
LINC00393-201ENST00000443621 DUTP33316 252 aaKnown RBP2.34□□□□□ -2.03
LINC00393-201ENST00000443621 MAS1LP35410 378 aa2.34□□□□□ -2.03
LINC00393-201ENST00000443621 LGALS7P47929 136 aa2.34□□□□□ -2.03
LINC00393-201ENST00000443621 GLIPR1P48060 266 aa2.34□□□□□ -2.03
LINC00393-201ENST00000443621 SULT1A1P50225 295 aa2.34□□□□□ -2.03
LINC00393-201ENST00000443621 RAB13P51153 203 aa2.34□□□□□ -2.03
LINC00393-201ENST00000443621 PRRX1P54821 245 aa2.34□□□□□ -2.03
LINC00393-201ENST00000443621 DSCR9P59020 149 aa2.34□□□□□ -2.03
LINC00393-201ENST00000443621 FXYD4P59646 89 aa2.34□□□□□ -2.03
LINC00393-201ENST00000443621 GNB2P62879 340 aa2.34□□□□□ -2.03
LINC00393-201ENST00000443621 RPL31P62899 125 aaKnown RBP2.34□□□□□ -2.03
LINC00393-201ENST00000443621 HBG1P69891 147 aa2.34□□□□□ -2.03
LINC00393-201ENST00000443621 HBG2P69892 147 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms