RNA–Protein interactions for RNA: ENST00000442842.5

TM9SF4-204, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-204ENST00000442842 LSAMPQ13449 338 aa10.99□□□□□ -0.65
TM9SF4-204ENST00000442842 DIAPH2-AS1Q14236 149 aa10.99□□□□□ -0.65
TM9SF4-204ENST00000442842 SSX2Q16385 188 aa10.99□□□□□ -0.65
TM9SF4-204ENST00000442842 DEFB112Q30KQ8 113 aa10.99□□□□□ -0.65
TM9SF4-204ENST00000442842 SCGB2B2Q4G0G5 96 aa10.99□□□□□ -0.65
TM9SF4-204ENST00000442842 LY6G6FQ5SQ64 297 aa10.99□□□□□ -0.65
TM9SF4-204ENST00000442842 VAX1Q5SQQ9 334 aa10.99□□□□□ -0.65
TM9SF4-204ENST00000442842 MINOS1Q5TGZ0 78 aa10.99□□□□□ -0.65
TM9SF4-204ENST00000442842 DYNAPQ8N1N2 210 aa10.99□□□□□ -0.65
TM9SF4-204ENST00000442842 C8orf31Q8N9H6 132 aa10.99□□□□□ -0.65
TM9SF4-204ENST00000442842 OR56B4Q8NH76 319 aa10.99□□□□□ -0.65
TM9SF4-204ENST00000442842 SECTM1Q8WVN6 248 aa10.99□□□□□ -0.65
TM9SF4-204ENST00000442842 FXYD6Q9H0Q3 95 aa10.99□□□□□ -0.65
TM9SF4-204ENST00000442842 MCUBQ9NWR8 336 aa10.99□□□□□ -0.65
TM9SF4-204ENST00000442842 DPM3Q9P2X0 92 aa10.99□□□□□ -0.65
TM9SF4-204ENST00000442842 ZNF107Q9UII5 783 aaPredicted RBP10.99□□□□□ -0.65
TM9SF4-204ENST00000442842 MINOS1-NBL1R4GNA1 71 aa10.99□□□□□ -0.65
TM9SF4-204ENST00000442842 DSCAML1Q8TD84 2053 aa10.98□□□□□ -0.65
TM9SF4-204ENST00000442842 IGKV1D-13A0A0B4J2D9 117 aa10.98□□□□□ -0.65
TM9SF4-204ENST00000442842 CD74P04233 296 aa10.98□□□□□ -0.65
TM9SF4-204ENST00000442842 IGKV1-13P0DP09 117 aa10.98□□□□□ -0.65
TM9SF4-204ENST00000442842 CD40LGP29965 261 aa10.98□□□□□ -0.65
TM9SF4-204ENST00000442842 PPP5CP53041 499 aa10.98□□□□□ -0.65
TM9SF4-204ENST00000442842 KLF9Q13886 244 aaPredicted RBP10.98□□□□□ -0.65
TM9SF4-204ENST00000442842 MEF2DQ14814 521 aa10.98□□□□□ -0.65
TM9SF4-204ENST00000442842 RPL39P5Q59GN2 51 aa10.98□□□□□ -0.65
TM9SF4-204ENST00000442842 C9orf139Q6ZV77 190 aa10.98□□□□□ -0.65
TM9SF4-204ENST00000442842 OR6F1Q8NGZ6 308 aa10.98□□□□□ -0.65
TM9SF4-204ENST00000442842 ZDHHC16Q969W1 377 aa10.98□□□□□ -0.65
TM9SF4-204ENST00000442842 ZNF48Q96MX3 618 aaPredicted RBP10.98□□□□□ -0.65
TM9SF4-204ENST00000442842 TSC22D3Q99576 134 aa10.98□□□□□ -0.65
TM9SF4-204ENST00000442842 CCDC32Q9BV29 185 aa10.98□□□□□ -0.65
TM9SF4-204ENST00000442842 TOLLIPQ9H0E2 274 aa10.98□□□□□ -0.65
TM9SF4-204ENST00000442842 OCEL1Q9H607 264 aa10.98□□□□□ -0.65
TM9SF4-204ENST00000442842 ABCB10Q9NRK6 738 aa10.98□□□□□ -0.65
TM9SF4-204ENST00000442842 PIPOXQ9P0Z9 390 aa10.98□□□□□ -0.65
TM9SF4-204ENST00000442842 ZNF221Q9UK13 617 aa10.98□□□□□ -0.65
TM9SF4-204ENST00000442842 OR2W1Q9Y3N9 320 aa10.98□□□□□ -0.65
TM9SF4-204ENST00000442842 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.98□□□□□ -0.659e-8■■□□□ 13.2
TM9SF4-204ENST00000442842 DISC1C4P0D8 188 aa10.97□□□□□ -0.65
TM9SF4-204ENST00000442842 ITGB1BP1O14713 200 aa10.97□□□□□ -0.65
TM9SF4-204ENST00000442842 RAB29O14966 203 aa10.97□□□□□ -0.65
TM9SF4-204ENST00000442842 TUSC2O75896 110 aa10.97□□□□□ -0.65
TM9SF4-204ENST00000442842 FAUP35544 74 aaKnown RBP10.97□□□□□ -0.65
TM9SF4-204ENST00000442842 LDLRAD3Q86YD5 345 aa10.97□□□□□ -0.65
TM9SF4-204ENST00000442842 TGIF2LXQ8IUE1 241 aa10.97□□□□□ -0.65
TM9SF4-204ENST00000442842 ODF3L1Q8IXM7 274 aa10.97□□□□□ -0.65
TM9SF4-204ENST00000442842 ARRDC1Q8N5I2 433 aa10.97□□□□□ -0.65
TM9SF4-204ENST00000442842 SIGLECL1Q8N7X8 197 aa10.97□□□□□ -0.65
TM9SF4-204ENST00000442842 GIMAP1Q8WWP7 306 aa10.97□□□□□ -0.65
TM9SF4-204ENST00000442842 MALSU1Q96EH3 234 aa10.97□□□□□ -0.65
TM9SF4-204ENST00000442842 S1PR3Q99500 378 aa10.97□□□□□ -0.65
TM9SF4-204ENST00000442842 TNFRSF19Q9NS68 423 aa10.97□□□□□ -0.65
TM9SF4-204ENST00000442842 M0R1X1 148 aa10.96□□□□□ -0.65
TM9SF4-204ENST00000442842 FAM157CP0CG43 387 aa10.96□□□□□ -0.65
TM9SF4-204ENST00000442842 PGAM2P15259 253 aa10.96□□□□□ -0.65
TM9SF4-204ENST00000442842 ARHGDIBP52566 201 aa10.96□□□□□ -0.65
TM9SF4-204ENST00000442842 RBMS3Q6XE24 437 aaKnown RBP10.96□□□□□ -0.65
TM9SF4-204ENST00000442842 ZNF833PQ6ZTB9 187 aa10.96□□□□□ -0.65
TM9SF4-204ENST00000442842 MOB3BQ86TA1 216 aa10.96□□□□□ -0.65
TM9SF4-204ENST00000442842 ZNF645Q8N7E2 425 aa10.96□□□□□ -0.65
TM9SF4-204ENST00000442842 RTN4IP1Q8WWV3 396 aaPredicted RBP10.96□□□□□ -0.65
TM9SF4-204ENST00000442842 MOB3AQ96BX8 217 aa10.96□□□□□ -0.65
TM9SF4-204ENST00000442842 C5orf30Q96GV9 206 aa10.96□□□□□ -0.65
TM9SF4-204ENST00000442842 AJUBAQ96IF1 538 aa10.96□□□□□ -0.65
TM9SF4-204ENST00000442842 AGMATQ9BSE5 352 aa10.96□□□□□ -0.65
TM9SF4-204ENST00000442842 MRPL20Q9BYC9 149 aaKnown RBP10.96□□□□□ -0.65
TM9SF4-204ENST00000442842 SLC5A7Q9GZV3 580 aa10.96□□□□□ -0.65
TM9SF4-204ENST00000442842 HRASLSQ9HDD0 168 aa10.96□□□□□ -0.65
TM9SF4-204ENST00000442842 SDHAF2Q9NX18 166 aa10.96□□□□□ -0.65
TM9SF4-204ENST00000442842 ACANP16112 2415 aa10.96□□□□□ -0.66
TM9SF4-204ENST00000442842 ZFHX3Q15911 3703 aa10.96□□□□□ -0.66
TM9SF4-204ENST00000442842 IGHV3-72A0A0B4J1Y9 119 aa10.95□□□□□ -0.66
TM9SF4-204ENST00000442842 A0A1W2PPI3 338 aa10.95□□□□□ -0.66
TM9SF4-204ENST00000442842 OR5H14A6NHG9 310 aa10.95□□□□□ -0.66
TM9SF4-204ENST00000442842 LY6LH3BQJ8 138 aa10.95□□□□□ -0.66
TM9SF4-204ENST00000442842 TIMM23O14925 209 aa10.95□□□□□ -0.66
TM9SF4-204ENST00000442842 TNFSF12O43508 249 aa10.95□□□□□ -0.66
TM9SF4-204ENST00000442842 GAPDHP04406 335 aaKnown RBP10.95□□□□□ -0.66
TM9SF4-204ENST00000442842 ZNF816Q0VGE8 651 aaPredicted RBP10.95□□□□□ -0.66
TM9SF4-204ENST00000442842 BAMBIQ13145 260 aa10.95□□□□□ -0.66
TM9SF4-204ENST00000442842 ZNF660Q6AZW8 331 aaPredicted RBP10.95□□□□□ -0.66
TM9SF4-204ENST00000442842 CCDC144NLQ6NUI1 221 aa10.95□□□□□ -0.66
TM9SF4-204ENST00000442842 OR51S1Q8NGJ8 323 aa10.95□□□□□ -0.66
TM9SF4-204ENST00000442842 CCL28Q9NRJ3 127 aa10.95□□□□□ -0.66
TM9SF4-204ENST00000442842 MED13LQ71F56 2210 aa10.94□□□□□ -0.66
TM9SF4-204ENST00000442842 CUBNO60494 3623 aa10.94□□□□□ -0.66
TM9SF4-204ENST00000442842 IGHV1-3A0A0C4DH29 117 aa10.94□□□□□ -0.66
TM9SF4-204ENST00000442842 OOSP1A8MZH6 123 aa10.94□□□□□ -0.66
TM9SF4-204ENST00000442842 H3BUX3 64 aa10.94□□□□□ -0.66
TM9SF4-204ENST00000442842 HOXA3O43365 443 aaPredicted RBP10.94□□□□□ -0.66
TM9SF4-204ENST00000442842 TXNL1O43396 289 aa10.94□□□□□ -0.66
TM9SF4-204ENST00000442842 IGHV4-59P01825 116 aa10.94□□□□□ -0.66
TM9SF4-204ENST00000442842 ZNF735P0CB33 412 aa10.94□□□□□ -0.66
TM9SF4-204ENST00000442842 CD24P25063 80 aa10.94□□□□□ -0.66
TM9SF4-204ENST00000442842 RAB13P51153 203 aa10.94□□□□□ -0.66
TM9SF4-204ENST00000442842 ZNF137PP52743 207 aa10.94□□□□□ -0.66
TM9SF4-204ENST00000442842 LRRC75BQ2VPJ9 315 aa10.94□□□□□ -0.66
TM9SF4-204ENST00000442842 FAM71F2Q6NXP2 309 aa10.94□□□□□ -0.66
TM9SF4-204ENST00000442842 DHRS11Q6UWP2 260 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 135.9 ms