RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 CRIP2P52943 208 aaPredicted RBP3.1□□□□□ -1.91
CDC42BPA-207ENST00000441725 DLX1P56177 255 aa3.1□□□□□ -1.91
CDC42BPA-207ENST00000441725 HSPE1P61604 102 aaKnown RBP3.1□□□□□ -1.91
CDC42BPA-207ENST00000441725 SELENOWP63302 87 aa3.1□□□□□ -1.91
CDC42BPA-207ENST00000441725 HIST1H3AP68431 136 aa3.1□□□□□ -1.91
CDC42BPA-207ENST00000441725 H3F3AP84243 136 aa3.1□□□□□ -1.91
CDC42BPA-207ENST00000441725 INCA1Q0VD86 236 aa3.1□□□□□ -1.91
CDC42BPA-207ENST00000441725 EBPQ15125 230 aaKnown RBP3.1□□□□□ -1.91
CDC42BPA-207ENST00000441725 GUCA2BQ16661 112 aa3.1□□□□□ -1.91
CDC42BPA-207ENST00000441725 ZNF181Q2M3W8 571 aa3.1□□□□□ -1.91
CDC42BPA-207ENST00000441725 ZFAND6Q6FIF0 208 aa3.1□□□□□ -1.91
CDC42BPA-207ENST00000441725 IGFL2Q6UWQ7 119 aa3.1□□□□□ -1.91
CDC42BPA-207ENST00000441725 HIST2H3AQ71DI3 136 aa3.1□□□□□ -1.91
CDC42BPA-207ENST00000441725 CROCCP2Q86T23 111 aa3.1□□□□□ -1.91
CDC42BPA-207ENST00000441725 FAM24BQ8N5W8 94 aa3.1□□□□□ -1.91
CDC42BPA-207ENST00000441725 OR52L1Q8NGH7 329 aa3.1□□□□□ -1.91
CDC42BPA-207ENST00000441725 OR2T4Q8NH00 348 aa3.1□□□□□ -1.91
CDC42BPA-207ENST00000441725 FNDC9Q8TBE3 224 aa3.1□□□□□ -1.91
CDC42BPA-207ENST00000441725 ZFAND1Q8TCF1 268 aa3.1□□□□□ -1.91
CDC42BPA-207ENST00000441725 SMIM8Q96KF7 97 aa3.1□□□□□ -1.91
CDC42BPA-207ENST00000441725 LINC00052Q96N35 136 aa3.1□□□□□ -1.91
CDC42BPA-207ENST00000441725 LXNQ9BS40 222 aa3.1□□□□□ -1.91
CDC42BPA-207ENST00000441725 MED11Q9P086 117 aa3.1□□□□□ -1.91
CDC42BPA-207ENST00000441725 BTRCQ9Y297 605 aa3.1□□□□□ -1.91
CDC42BPA-207ENST00000441725 HDGFL3Q9Y3E1 203 aa3.1□□□□□ -1.91
CDC42BPA-207ENST00000441725 PIK3C2BO00750 1634 aa3.1□□□□□ -1.91
CDC42BPA-207ENST00000441725 PIK3C2GO75747 1445 aa3.1□□□□□ -1.91
CDC42BPA-207ENST00000441725 RAI1Q7Z5J4 1906 aaPredicted RBP3.1□□□□□ -1.91
CDC42BPA-207ENST00000441725 NEXMIFQ5QGS0 1516 aa3.1□□□□□ -1.91
CDC42BPA-207ENST00000441725 SYCP2Q9BX26 1530 aa3.1□□□□□ -1.91
CDC42BPA-207ENST00000441725 ADAMTS7Q9UKP4 1686 aa3.1□□□□□ -1.91
CDC42BPA-207ENST00000441725 TRAV36DV7A0A075B6V5 113 aa3.1□□□□□ -1.91
CDC42BPA-207ENST00000441725 FAM236DA0A1B0GTK5 79 aa3.1□□□□□ -1.91
CDC42BPA-207ENST00000441725 SPAARA0A1B0GVQ0 90 aa3.1□□□□□ -1.91
CDC42BPA-207ENST00000441725 SMKR1H3BMG3 65 aa3.1□□□□□ -1.91
CDC42BPA-207ENST00000441725 MRPS12O15235 138 aaKnown RBP3.1□□□□□ -1.91
CDC42BPA-207ENST00000441725 RBFOX2O43251 390 aaKnown RBP eCLIP3.1□□□□□ -1.919e-6■■□□□ 11.7
CDC42BPA-207ENST00000441725 CRLF1O75462 422 aa3.1□□□□□ -1.91
CDC42BPA-207ENST00000441725 IGKV5-2P06315 115 aa3.1□□□□□ -1.91
CDC42BPA-207ENST00000441725 CT45A6P0DMU7 189 aa3.1□□□□□ -1.91
CDC42BPA-207ENST00000441725 CT45A5P0DMU8 189 aa3.1□□□□□ -1.91
CDC42BPA-207ENST00000441725 CT45A7P0DMV0 189 aa3.1□□□□□ -1.91
CDC42BPA-207ENST00000441725 FAM236CP0DP71 79 aa3.1□□□□□ -1.91
CDC42BPA-207ENST00000441725 RAB5CP51148 216 aa3.1□□□□□ -1.91
CDC42BPA-207ENST00000441725 CDK6Q00534 326 aa3.1□□□□□ -1.91
CDC42BPA-207ENST00000441725 FABP9Q0Z7S8 132 aa3.1□□□□□ -1.91
CDC42BPA-207ENST00000441725 CT45A1Q5HYN5 189 aa3.1□□□□□ -1.91
CDC42BPA-207ENST00000441725 TEX36Q5VZQ5 186 aa3.1□□□□□ -1.91
CDC42BPA-207ENST00000441725 ARL9Q6T311 187 aa3.1□□□□□ -1.91
CDC42BPA-207ENST00000441725 DNM1P46Q6ZS02 220 aa3.1□□□□□ -1.91
CDC42BPA-207ENST00000441725 FAM183BPQ6ZVS7 135 aa3.1□□□□□ -1.91
CDC42BPA-207ENST00000441725 OAFQ86UD1 273 aa3.1□□□□□ -1.91
CDC42BPA-207ENST00000441725 NAA40Q86UY6 237 aa3.1□□□□□ -1.91
CDC42BPA-207ENST00000441725 SLC25A42Q86VD7 318 aa3.1□□□□□ -1.91
CDC42BPA-207ENST00000441725 OR2K2Q8NGT1 345 aa3.1□□□□□ -1.91
CDC42BPA-207ENST00000441725 CT45A3Q8NHU0 189 aa3.1□□□□□ -1.91
CDC42BPA-207ENST00000441725 TMEM101Q96IK0 257 aa3.1□□□□□ -1.91
CDC42BPA-207ENST00000441725 LINC00479Q96M42 142 aa3.1□□□□□ -1.91
CDC42BPA-207ENST00000441725 REEP1Q9H902 201 aa3.1□□□□□ -1.91
CDC42BPA-207ENST00000441725 RBFOX1Q9NWB1 397 aaKnown RBP3.1□□□□□ -1.91
CDC42BPA-207ENST00000441725 MRPL16Q9NX20 251 aaKnown RBP3.1□□□□□ -1.91
CDC42BPA-207ENST00000441725 CES1P1Q9UKY3 287 aa3.1□□□□□ -1.91
CDC42BPA-207ENST00000441725 OR51B2Q9Y5P1 312 aa3.1□□□□□ -1.91
CDC42BPA-207ENST00000441725 NWD2Q9ULI1 1742 aa3.09□□□□□ -1.91
CDC42BPA-207ENST00000441725 TULP4Q9NRJ4 1543 aa3.09□□□□□ -1.91
CDC42BPA-207ENST00000441725 PREX2Q70Z35 1606 aa3.09□□□□□ -1.91
CDC42BPA-207ENST00000441725 IGHV3OR16-13A0A075B7E8 117 aa3.09□□□□□ -1.91
CDC42BPA-207ENST00000441725 A0A1W2PPR1 153 aa3.09□□□□□ -1.91
CDC42BPA-207ENST00000441725 F6UB75 175 aa3.09□□□□□ -1.91
CDC42BPA-207ENST00000441725 H7C423 109 aa3.09□□□□□ -1.91
CDC42BPA-207ENST00000441725 M0R1B8 84 aa3.09□□□□□ -1.91
CDC42BPA-207ENST00000441725 ZNF593O00488 134 aaPredicted RBP3.09□□□□□ -1.91
CDC42BPA-207ENST00000441725 FKBP6O75344 327 aa3.09□□□□□ -1.91
CDC42BPA-207ENST00000441725 MPC2O95563 127 aa3.09□□□□□ -1.91
CDC42BPA-207ENST00000441725 OPN1SWP03999 348 aa3.09□□□□□ -1.91
CDC42BPA-207ENST00000441725 SRIP30626 198 aa3.09□□□□□ -1.91
CDC42BPA-207ENST00000441725 SLC25A1P53007 311 aa3.09□□□□□ -1.91
CDC42BPA-207ENST00000441725 MEF2CQ06413 473 aaPredicted RBP3.09□□□□□ -1.91
CDC42BPA-207ENST00000441725 CLLU1Q5K131 121 aa3.09□□□□□ -1.91
CDC42BPA-207ENST00000441725 FAM74A1Q5RGS3 127 aa3.09□□□□□ -1.91
CDC42BPA-207ENST00000441725 COL5A1-AS1Q5SY13 56 aa3.09□□□□□ -1.91
CDC42BPA-207ENST00000441725 MYOM3Q5VTT5 1437 aa3.09□□□□□ -1.91
CDC42BPA-207ENST00000441725 GLYATQ6IB77 296 aa3.09□□□□□ -1.91
CDC42BPA-207ENST00000441725 C11orf71Q6IPW1 123 aa3.09□□□□□ -1.91
CDC42BPA-207ENST00000441725 C2orf66Q6UXQ4 117 aa3.09□□□□□ -1.91
CDC42BPA-207ENST00000441725 C6orf120Q7Z4R8 191 aa3.09□□□□□ -1.91
CDC42BPA-207ENST00000441725 GAPTQ8N292 157 aa3.09□□□□□ -1.91
CDC42BPA-207ENST00000441725 OR1S1Q8NH92 325 aa3.09□□□□□ -1.91
CDC42BPA-207ENST00000441725 BTN2A3PQ96KV6 586 aa3.09□□□□□ -1.91
CDC42BPA-207ENST00000441725 RTBDNQ9BSG5 229 aaPredicted RBP3.09□□□□□ -1.91
CDC42BPA-207ENST00000441725 SELENOIQ9C0D9 397 aa3.09□□□□□ -1.91
CDC42BPA-207ENST00000441725 ZNF442Q9H7R0 627 aa3.09□□□□□ -1.91
CDC42BPA-207ENST00000441725 KCNJ16Q9NPI9 418 aa3.09□□□□□ -1.91
CDC42BPA-207ENST00000441725 SCN3BQ9NY72 215 aa3.09□□□□□ -1.91
CDC42BPA-207ENST00000441725 TRAPPC2LQ9UL33 140 aa3.09□□□□□ -1.91
CDC42BPA-207ENST00000441725 ST3GAL6Q9Y274 331 aa3.09□□□□□ -1.91
CDC42BPA-207ENST00000441725 UBIAD1Q9Y5Z9 338 aa3.09□□□□□ -1.91
CDC42BPA-207ENST00000441725 KIF13BQ9NQT8 1826 aa3.09□□□□□ -1.92
CDC42BPA-207ENST00000441725 EHBP1L1Q8N3D4 1523 aa3.09□□□□□ -1.92
CDC42BPA-207ENST00000441725 CICQ96RK0 1608 aaPredicted RBP3.09□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms