RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 FAM201AQ5SY85 155 aa5.01□□□□□ -1.61
VPS50-205ENST00000441602 STX12Q86Y82 276 aa5.01□□□□□ -1.61
VPS50-205ENST00000441602 BAP18Q8IXM2 172 aa5.01□□□□□ -1.61
VPS50-205ENST00000441602 OR4D5Q8NGN0 318 aa5.01□□□□□ -1.61
VPS50-205ENST00000441602 STOML3Q8TAV4 291 aa5.01□□□□□ -1.61
VPS50-205ENST00000441602 ABHD14AQ9BUJ0 271 aa5.01□□□□□ -1.61
VPS50-205ENST00000441602 OR5AC2Q9NZP5 309 aa5.01□□□□□ -1.61
VPS50-205ENST00000441602 KAAG1Q9UBP8 84 aa5.01□□□□□ -1.61
VPS50-205ENST00000441602 LAMA1P25391 3075 aa5.01□□□□□ -1.61
VPS50-205ENST00000441602 ESPL1Q14674 2120 aa5.01□□□□□ -1.61
VPS50-205ENST00000441602 LINC00862A6NCI5 91 aa5.01□□□□□ -1.61
VPS50-205ENST00000441602 ST8SIA5O15466 376 aa5.01□□□□□ -1.61
VPS50-205ENST00000441602 RBFOX2O43251 390 aaKnown RBP eCLIP5.01□□□□□ -1.61
VPS50-205ENST00000441602 CAV2P51636 162 aa5.01□□□□□ -1.61
VPS50-205ENST00000441602 TAGLNQ01995 201 aaKnown RBP5.01□□□□□ -1.61
VPS50-205ENST00000441602 BAXQ07812 192 aa5.01□□□□□ -1.61
VPS50-205ENST00000441602 H2BFWTQ7Z2G1 175 aa5.01□□□□□ -1.61
VPS50-205ENST00000441602 LHFPL5Q8TAF8 219 aa5.01□□□□□ -1.61
VPS50-205ENST00000441602 GPR146Q96CH1 333 aa5.01□□□□□ -1.61
VPS50-205ENST00000441602 ZNF714Q96N38 554 aa5.01□□□□□ -1.61
VPS50-205ENST00000441602 SPTA1P02549 2419 aa5.01□□□□□ -1.61
VPS50-205ENST00000441602 DEFB108AA8MXU0 73 aa5□□□□□ -1.61
VPS50-205ENST00000441602 H0YIZ8 118 aa5□□□□□ -1.61
VPS50-205ENST00000441602 RAB29O14966 203 aa5□□□□□ -1.61
VPS50-205ENST00000441602 RBMXL2O75526 392 aaKnown RBP5□□□□□ -1.61
VPS50-205ENST00000441602 DFFBO76075 338 aa5□□□□□ -1.61
VPS50-205ENST00000441602 TFF1P04155 84 aa5□□□□□ -1.61
VPS50-205ENST00000441602 SNTB1Q13884 538 aaKnown RBP5□□□□□ -1.61
VPS50-205ENST00000441602 ZNF266Q14584 549 aa5□□□□□ -1.61
VPS50-205ENST00000441602 SWI5Q1ZZU3 235 aa5□□□□□ -1.61
VPS50-205ENST00000441602 SPRNQ5BIV9 151 aa5□□□□□ -1.61
VPS50-205ENST00000441602 NMSQ5H8A3 153 aa5□□□□□ -1.61
VPS50-205ENST00000441602 ALKAL2Q6UX46 152 aa5□□□□□ -1.61
VPS50-205ENST00000441602 OR8B3Q8NGG8 313 aa5□□□□□ -1.61
VPS50-205ENST00000441602 OR4S2Q8NH73 311 aa5□□□□□ -1.61
VPS50-205ENST00000441602 NEUROG1Q92886 237 aa5□□□□□ -1.61
VPS50-205ENST00000441602 CIB3Q96Q77 187 aaPredicted RBP5□□□□□ -1.61
VPS50-205ENST00000441602 OR8B2Q96RD0 313 aa5□□□□□ -1.61
VPS50-205ENST00000441602 DCTN5Q9BTE1 182 aa5□□□□□ -1.61
VPS50-205ENST00000441602 CTNNBIP1Q9NSA3 81 aaPredicted RBP5□□□□□ -1.61
VPS50-205ENST00000441602 COA4Q9NYJ1 87 aa5□□□□□ -1.61
VPS50-205ENST00000441602 MIOXQ9UGB7 285 aa5□□□□□ -1.61
VPS50-205ENST00000441602 RP1L1Q8IWN7 2480 aaPredicted RBP5□□□□□ -1.61
VPS50-205ENST00000441602 MPTX1A8MV57 137 aa5□□□□□ -1.61
VPS50-205ENST00000441602 TOR1AO14656 332 aa5□□□□□ -1.61
VPS50-205ENST00000441602 HPRT1P00492 218 aa5□□□□□ -1.61
VPS50-205ENST00000441602 PLAUP00749 431 aa5□□□□□ -1.61
VPS50-205ENST00000441602 APOA2P02652 100 aa5□□□□□ -1.61
VPS50-205ENST00000441602 HKR1P10072 659 aa5□□□□□ -1.61
VPS50-205ENST00000441602 RRASP10301 218 aa5□□□□□ -1.61
VPS50-205ENST00000441602 RPP30P78346 268 aaKnown RBP5□□□□□ -1.61
VPS50-205ENST00000441602 RTL8BQ17RB0 113 aa5□□□□□ -1.61
VPS50-205ENST00000441602 C5orf24Q7Z6I8 188 aa5□□□□□ -1.61
VPS50-205ENST00000441602 OR2C3Q8N628 320 aa5□□□□□ -1.61
VPS50-205ENST00000441602 ITLN2Q8WWU7 325 aaPredicted RBP5□□□□□ -1.61
VPS50-205ENST00000441602 CACNG5Q9UF02 275 aa5□□□□□ -1.61
VPS50-205ENST00000441602 RPUSD1Q9UJJ7 312 aaKnown RBP5□□□□□ -1.61
VPS50-205ENST00000441602 NUDT19A8MXV4 375 aa5□□□□□ -1.61
VPS50-205ENST00000441602 SSSCA1O60232 199 aa5□□□□□ -1.61
VPS50-205ENST00000441602 ZG16O60844 167 aa5□□□□□ -1.61
VPS50-205ENST00000441602 IFNA5P01569 189 aa5□□□□□ -1.61
VPS50-205ENST00000441602 TAS2R30P59541 319 aa5□□□□□ -1.61
VPS50-205ENST00000441602 BLOC1S1P78537 153 aa5□□□□□ -1.61
VPS50-205ENST00000441602 SLC25A24Q6NUK1 477 aa5□□□□□ -1.61
VPS50-205ENST00000441602 COMMD7Q86VX2 200 aa5□□□□□ -1.61
VPS50-205ENST00000441602 SLC7A5P1Q8MH63 180 aa5□□□□□ -1.61
VPS50-205ENST00000441602 NEIL1Q96FI4 390 aaPredicted RBP5□□□□□ -1.61
VPS50-205ENST00000441602 SDHAF2Q9NX18 166 aa5□□□□□ -1.61
VPS50-205ENST00000441602 POLEQ07864 2286 aa5□□□□□ -1.61
VPS50-205ENST00000441602 FAM90A9PA6NNJ1 464 aa4.99□□□□□ -1.61
VPS50-205ENST00000441602 HRASP01112 189 aa4.99□□□□□ -1.61
VPS50-205ENST00000441602 CGB3P0DN86 165 aa4.99□□□□□ -1.61
VPS50-205ENST00000441602 CGB7P0DN87 165 aa4.99□□□□□ -1.61
VPS50-205ENST00000441602 GRNP28799 593 aaKnown RBP4.99□□□□□ -1.61
VPS50-205ENST00000441602 HBG1P69891 147 aa4.99□□□□□ -1.61
VPS50-205ENST00000441602 HBG2P69892 147 aa4.99□□□□□ -1.61
VPS50-205ENST00000441602 ID3Q02535 119 aa4.99□□□□□ -1.61
VPS50-205ENST00000441602 ZNF816Q0VGE8 651 aaPredicted RBP4.99□□□□□ -1.61
VPS50-205ENST00000441602 MST1LQ2TV78 715 aa4.99□□□□□ -1.61
VPS50-205ENST00000441602 PRAMEF5Q5TYX0 476 aa4.99□□□□□ -1.61
VPS50-205ENST00000441602 DHRS7BQ6IAN0 325 aaPredicted RBP4.99□□□□□ -1.61
VPS50-205ENST00000441602 LYG1Q8N1E2 194 aa4.99□□□□□ -1.61
VPS50-205ENST00000441602 OR1S2Q8NGQ3 325 aa4.99□□□□□ -1.61
VPS50-205ENST00000441602 RNF141Q8WVD5 230 aa4.99□□□□□ -1.61
VPS50-205ENST00000441602 LINC00574Q9H8X3 128 aa4.99□□□□□ -1.61
VPS50-205ENST00000441602 MED9Q9NWA0 146 aa4.99□□□□□ -1.61
VPS50-205ENST00000441602 FBXL17Q9UF56 701 aa4.99□□□□□ -1.61
VPS50-205ENST00000441602 PIEZO1Q92508 2521 aa4.99□□□□□ -1.61
VPS50-205ENST00000441602 SYNGR2O43760 224 aa4.99□□□□□ -1.61
VPS50-205ENST00000441602 SELLP14151 372 aa4.99□□□□□ -1.61
VPS50-205ENST00000441602 POLR2GP62487 172 aaKnown RBP eCLIP4.99□□□□□ -1.61
VPS50-205ENST00000441602 C17orf58Q2M2W7 97 aa4.99□□□□□ -1.61
VPS50-205ENST00000441602 TMEM155Q4W5P6 130 aa4.99□□□□□ -1.61
VPS50-205ENST00000441602 HEPN1Q6WQI6 88 aa4.99□□□□□ -1.61
VPS50-205ENST00000441602 ZCCHC24Q8N2G6 241 aaKnown RBP4.99□□□□□ -1.61
VPS50-205ENST00000441602 DMBX1Q8NFW5 382 aa4.99□□□□□ -1.61
VPS50-205ENST00000441602 OR4A16Q8NH70 328 aa4.99□□□□□ -1.61
VPS50-205ENST00000441602 R3HDM4Q96D70 268 aa4.99□□□□□ -1.61
VPS50-205ENST00000441602 TSNAXQ99598 290 aaKnown RBP4.99□□□□□ -1.61
VPS50-205ENST00000441602 PARP12Q9H0J9 701 aaKnown RBP4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms