RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 IGKV1-5P01602 117 aa17.22■□□□□ 0.35
SHOX2-203ENST00000441443 TYMSP04818 313 aa17.22■□□□□ 0.35
SHOX2-203ENST00000441443 KIR2DS4P43632 304 aa17.22■□□□□ 0.35
SHOX2-203ENST00000441443 RPS16P62249 146 aaKnown RBP17.22■□□□□ 0.35
SHOX2-203ENST00000441443 KIR2DS1Q14954 304 aa17.22■□□□□ 0.35
SHOX2-203ENST00000441443 ACSF3Q4G176 576 aaPredicted RBP17.22■□□□□ 0.35
SHOX2-203ENST00000441443 KCNIP4Q6PIL6 250 aa17.22■□□□□ 0.35
SHOX2-203ENST00000441443 Q6ZS49 121 aa17.22■□□□□ 0.35
SHOX2-203ENST00000441443 TCF23Q7RTU1 214 aa17.22■□□□□ 0.35
SHOX2-203ENST00000441443 PARD6AQ9NPB6 346 aa17.22■□□□□ 0.35
SHOX2-203ENST00000441443 CRIM1Q9NZV1 1036 aa17.22■□□□□ 0.35
SHOX2-203ENST00000441443 CHCHD2Q9Y6H1 151 aaPredicted RBP17.22■□□□□ 0.35
SHOX2-203ENST00000441443 EDN3P14138 238 aa17.22■□□□□ 0.35
SHOX2-203ENST00000441443 S100GP29377 79 aa17.22■□□□□ 0.35
SHOX2-203ENST00000441443 SRP14P37108 136 aaKnown RBP17.22■□□□□ 0.35
SHOX2-203ENST00000441443 GPM6AP51674 278 aa17.22■□□□□ 0.35
SHOX2-203ENST00000441443 CDX2Q99626 313 aaPredicted RBP17.22■□□□□ 0.35
SHOX2-203ENST00000441443 OR6C6A6NF89 314 aa17.21■□□□□ 0.35
SHOX2-203ENST00000441443 DMRTA1Q5VZB9 504 aa17.21■□□□□ 0.35
SHOX2-203ENST00000441443 SRXN1Q9BYN0 137 aa17.21■□□□□ 0.35
SHOX2-203ENST00000441443 MANBALQ9NQG1 85 aa17.21■□□□□ 0.35
SHOX2-203ENST00000441443 TRAV39A0A0B4J263 110 aa17.21■□□□□ 0.35
SHOX2-203ENST00000441443 HS3ST1O14792 307 aa17.21■□□□□ 0.35
SHOX2-203ENST00000441443 NPPCP23582 126 aa17.21■□□□□ 0.35
SHOX2-203ENST00000441443 RPL15P61313 204 aaKnown RBP17.21■□□□□ 0.35
SHOX2-203ENST00000441443 PRR18Q8N4B5 295 aa17.21■□□□□ 0.35
SHOX2-203ENST00000441443 UBALD1Q8TB05 177 aa17.21■□□□□ 0.35
SHOX2-203ENST00000441443 ZCCHC14Q8WYQ9 949 aaKnown RBP17.21■□□□□ 0.35
SHOX2-203ENST00000441443 PAM16Q9Y3D7 125 aa17.21■□□□□ 0.35
SHOX2-203ENST00000441443 OR2W1Q9Y3N9 320 aa17.21■□□□□ 0.35
SHOX2-203ENST00000441443 A0A0J9YW62 118 aa17.21■□□□□ 0.34
SHOX2-203ENST00000441443 TMEM38BQ9NVV0 291 aa17.21■□□□□ 0.34
SHOX2-203ENST00000441443 C19orf25Q9UFG5 118 aaPredicted RBP17.21■□□□□ 0.34
SHOX2-203ENST00000441443 M0QZK8 103 aa17.2■□□□□ 0.34
SHOX2-203ENST00000441443 TOX3O15405 576 aaPredicted RBP17.2■□□□□ 0.34
SHOX2-203ENST00000441443 VAMP5O95183 116 aa17.2■□□□□ 0.34
SHOX2-203ENST00000441443 OR10G9Q8NGN4 311 aa17.2■□□□□ 0.34
SHOX2-203ENST00000441443 OR10G7Q8NGN6 311 aa17.2■□□□□ 0.34
SHOX2-203ENST00000441443 RDH5Q92781 318 aa17.2■□□□□ 0.34
SHOX2-203ENST00000441443 REPIN1Q9BWE0 567 aaKnown RBP17.2■□□□□ 0.34
SHOX2-203ENST00000441443 FGF23Q9GZV9 251 aaPredicted RBP17.2■□□□□ 0.34
SHOX2-203ENST00000441443 WNT5BQ9H1J7 359 aa17.2■□□□□ 0.34
SHOX2-203ENST00000441443 LPAR2Q9HBW0 351 aa17.2■□□□□ 0.34
SHOX2-203ENST00000441443 OR1A1Q9P1Q5 309 aa17.2■□□□□ 0.34
SHOX2-203ENST00000441443 PGPEP1LA6NFU8 196 aa17.2■□□□□ 0.34
SHOX2-203ENST00000441443 CRYAAP02489 173 aa17.2■□□□□ 0.34
SHOX2-203ENST00000441443 ZNF324BQ6AW86 544 aaPredicted RBP17.2■□□□□ 0.34
SHOX2-203ENST00000441443 OPN3Q9H1Y3 402 aaPredicted RBP17.2■□□□□ 0.34
SHOX2-203ENST00000441443 MRPS18CQ9Y3D5 142 aaKnown RBP17.2■□□□□ 0.34
SHOX2-203ENST00000441443 SLC25A6P12236 298 aa17.19■□□□□ 0.34
SHOX2-203ENST00000441443 CCNOP22674 350 aa17.19■□□□□ 0.34
SHOX2-203ENST00000441443 TFPI2P48307 235 aa17.19■□□□□ 0.34
SHOX2-203ENST00000441443 TNFSF10P50591 281 aa17.19■□□□□ 0.34
SHOX2-203ENST00000441443 CLDN15P56746 228 aa17.19■□□□□ 0.34
SHOX2-203ENST00000441443 MTCH1Q9NZJ7 389 aa17.19■□□□□ 0.34
SHOX2-203ENST00000441443 TP53I11O14683 189 aa17.19■□□□□ 0.34
SHOX2-203ENST00000441443 CLDN1O95832 211 aa17.19■□□□□ 0.34
SHOX2-203ENST00000441443 BRS3P32247 399 aa17.19■□□□□ 0.34
SHOX2-203ENST00000441443 ZNF488Q96MN9 340 aa17.19■□□□□ 0.34
SHOX2-203ENST00000441443 OR2H1Q9GZK4 316 aa17.19■□□□□ 0.34
SHOX2-203ENST00000441443 CTXN2P0C2S0 81 aa17.18■□□□□ 0.34
SHOX2-203ENST00000441443 MPLP40238 635 aa17.18■□□□□ 0.34
SHOX2-203ENST00000441443 MRPS11P82912 194 aaKnown RBP17.18■□□□□ 0.34
SHOX2-203ENST00000441443 OR56B2PQ8NGI1 322 aa17.18■□□□□ 0.34
SHOX2-203ENST00000441443 NEIL1Q96FI4 390 aaPredicted RBP17.18■□□□□ 0.34
SHOX2-203ENST00000441443 PXMP4Q9Y6I8 212 aa17.18■□□□□ 0.34
SHOX2-203ENST00000441443 CTXND1A0A1B0GTU2 59 aa17.18■□□□□ 0.34
SHOX2-203ENST00000441443 FKBP2P26885 142 aaKnown RBP17.18■□□□□ 0.34
SHOX2-203ENST00000441443 FGF12P61328 243 aa17.18■□□□□ 0.34
SHOX2-203ENST00000441443 PPP1CBP62140 327 aa17.18■□□□□ 0.34
SHOX2-203ENST00000441443 PMS2CLQ68D20 193 aa17.18■□□□□ 0.34
SHOX2-203ENST00000441443 Q6ZWC4 215 aa17.18■□□□□ 0.34
SHOX2-203ENST00000441443 WDYHV1Q96HA8 205 aa17.18■□□□□ 0.34
SHOX2-203ENST00000441443 SGCZQ96LD1 299 aa17.18■□□□□ 0.34
SHOX2-203ENST00000441443 PILRBQ9UKJ0 227 aa17.18■□□□□ 0.34
SHOX2-203ENST00000441443 COLQQ9Y215 455 aaPredicted RBP17.18■□□□□ 0.34
SHOX2-203ENST00000441443 ESPL1Q14674 2120 aa17.18■□□□□ 0.34
SHOX2-203ENST00000441443 C1QTNF9P0C862 333 aa17.18■□□□□ 0.34
SHOX2-203ENST00000441443 ADMP35318 185 aa17.18■□□□□ 0.34
SHOX2-203ENST00000441443 GAGE1Q13065 139 aa17.18■□□□□ 0.34
SHOX2-203ENST00000441443 OR5I1Q13606 314 aa17.18■□□□□ 0.34
SHOX2-203ENST00000441443 TRIM61Q5EBN2 209 aa17.18■□□□□ 0.34
SHOX2-203ENST00000441443 CMTM2Q8TAZ6 248 aa17.18■□□□□ 0.34
SHOX2-203ENST00000441443 DERL1Q9BUN8 251 aa17.18■□□□□ 0.34
SHOX2-203ENST00000441443 RBM7Q9Y580 266 aaKnown RBP17.18■□□□□ 0.34
SHOX2-203ENST00000441443 CCL3P10147 92 aa17.17■□□□□ 0.34
SHOX2-203ENST00000441443 FFAR4Q5NUL3 377 aa17.17■□□□□ 0.34
SHOX2-203ENST00000441443 TMEM106BQ9NUM4 274 aa17.17■□□□□ 0.34
SHOX2-203ENST00000441443 C11orf94C9JXX5 98 aa17.17■□□□□ 0.34
SHOX2-203ENST00000441443 ZIC3O60481 467 aa17.17■□□□□ 0.34
SHOX2-203ENST00000441443 DKK1O94907 266 aa17.17■□□□□ 0.34
SHOX2-203ENST00000441443 CCL2P13500 99 aa17.17■□□□□ 0.34
SHOX2-203ENST00000441443 UBE2G2P60604 165 aa17.17■□□□□ 0.34
SHOX2-203ENST00000441443 LCN2P80188 198 aa17.17■□□□□ 0.34
SHOX2-203ENST00000441443 CEACAM16Q2WEN9 425 aa17.17■□□□□ 0.34
SHOX2-203ENST00000441443 OR5P3Q8WZ94 311 aa17.17■□□□□ 0.34
SHOX2-203ENST00000441443 PATZ1Q9HBE1 687 aaKnown RBP17.17■□□□□ 0.34
SHOX2-203ENST00000441443 KCNS2Q9ULS6 477 aa17.17■□□□□ 0.34
SHOX2-203ENST00000441443 BDP1A6H8Y1 2624 aa17.17■□□□□ 0.34
SHOX2-203ENST00000441443 IGHV3-9P01782 118 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms