RNA–Protein interactions for RNA: ENST00000439775.1

SNRPD3-204, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 3

Gene SNRPD3, Length 640 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-204ENST00000439775 NDUFA3O95167 84 aa12.72□□□□□ -0.37
SNRPD3-204ENST00000439775 CRHBPP24387 322 aa12.72□□□□□ -0.37
SNRPD3-204ENST00000439775 DCTN2Q13561 401 aaKnown RBP12.72□□□□□ -0.37
SNRPD3-204ENST00000439775 FHL3Q13643 280 aa12.72□□□□□ -0.37
SNRPD3-204ENST00000439775 P2RY14Q15391 338 aa12.72□□□□□ -0.37
SNRPD3-204ENST00000439775 RAB11BQ15907 218 aa12.72□□□□□ -0.37
SNRPD3-204ENST00000439775 C5orf64Q2M2E5 130 aa12.72□□□□□ -0.37
SNRPD3-204ENST00000439775 DEFB136Q30KP8 78 aa12.72□□□□□ -0.37
SNRPD3-204ENST00000439775 RITA1Q96K30 269 aa12.72□□□□□ -0.37
SNRPD3-204ENST00000439775 VCX3BQ9H321 246 aa12.72□□□□□ -0.37
SNRPD3-204ENST00000439775 OR51J1Q9H342 316 aa12.72□□□□□ -0.37
SNRPD3-204ENST00000439775 C12orf4Q9NQ89 552 aa12.72□□□□□ -0.37
SNRPD3-204ENST00000439775 AK3Q9UIJ7 227 aa12.72□□□□□ -0.37
SNRPD3-204ENST00000439775 IGHV7-81A0A0B4J1V7 117 aa12.71□□□□□ -0.37
SNRPD3-204ENST00000439775 OR5H14A6NHG9 310 aa12.71□□□□□ -0.37
SNRPD3-204ENST00000439775 ATP6V0E1O15342 81 aa12.71□□□□□ -0.37
SNRPD3-204ENST00000439775 SOCS1O15524 211 aa12.71□□□□□ -0.37
SNRPD3-204ENST00000439775 CNTFRP26992 372 aa12.71□□□□□ -0.37
SNRPD3-204ENST00000439775 PPIFP30405 207 aaKnown RBP12.71□□□□□ -0.37
SNRPD3-204ENST00000439775 RANBP1P43487 201 aa12.71□□□□□ -0.37
SNRPD3-204ENST00000439775 RAB25P57735 213 aa12.71□□□□□ -0.37
SNRPD3-204ENST00000439775 HLA-DRB3P79483 266 aa12.71□□□□□ -0.37
SNRPD3-204ENST00000439775 FAM131AQ6UXB0 335 aa12.71□□□□□ -0.37
SNRPD3-204ENST00000439775 OR5M8Q8NGP6 311 aa12.71□□□□□ -0.37
SNRPD3-204ENST00000439775 SETD6Q8TBK2 473 aa12.71□□□□□ -0.37
SNRPD3-204ENST00000439775 MGLLQ99685 303 aa12.71□□□□□ -0.37
SNRPD3-204ENST00000439775 KIAA1456Q9P272 454 aa12.71□□□□□ -0.37
SNRPD3-204ENST00000439775 AK6Q9Y3D8 172 aaKnown RBP12.71□□□□□ -0.37
SNRPD3-204ENST00000439775 IGLV1-40P01703 118 aa12.7□□□□□ -0.38
SNRPD3-204ENST00000439775 CALRP27797 417 aaKnown RBP12.7□□□□□ -0.38
SNRPD3-204ENST00000439775 HSPA13P48723 471 aa12.7□□□□□ -0.38
SNRPD3-204ENST00000439775 FABP5Q01469 135 aa12.7□□□□□ -0.38
SNRPD3-204ENST00000439775 TBCEQ15813 527 aaPredicted RBP12.7□□□□□ -0.38
SNRPD3-204ENST00000439775 LIN54Q6MZP7 749 aa12.7□□□□□ -0.38
SNRPD3-204ENST00000439775 EDARADDQ8WWZ3 215 aa12.7□□□□□ -0.38
SNRPD3-204ENST00000439775 UBE2E2Q96LR5 201 aa12.7□□□□□ -0.38
SNRPD3-204ENST00000439775 AGMATQ9BSE5 352 aa12.7□□□□□ -0.38
SNRPD3-204ENST00000439775 HDHD3Q9BSH5 251 aaPredicted RBP12.7□□□□□ -0.38
SNRPD3-204ENST00000439775 CCDC90BQ9GZT6 254 aa12.7□□□□□ -0.38
SNRPD3-204ENST00000439775 PARP12Q9H0J9 701 aaKnown RBP12.7□□□□□ -0.38
SNRPD3-204ENST00000439775 ACOT13Q9NPJ3 140 aa12.7□□□□□ -0.38
SNRPD3-204ENST00000439775 PARP11Q9NR21 331 aa12.7□□□□□ -0.38
SNRPD3-204ENST00000439775 TRAV41A0A0B4J266 112 aa12.69□□□□□ -0.38
SNRPD3-204ENST00000439775 G3V318 75 aa12.69□□□□□ -0.38
SNRPD3-204ENST00000439775 RAMP3O60896 148 aa12.69□□□□□ -0.38
SNRPD3-204ENST00000439775 CT45A6P0DMU7 189 aa12.69□□□□□ -0.38
SNRPD3-204ENST00000439775 CT45A5P0DMU8 189 aa12.69□□□□□ -0.38
SNRPD3-204ENST00000439775 CT45A7P0DMV0 189 aa12.69□□□□□ -0.38
SNRPD3-204ENST00000439775 ZBTB25P24278 435 aa12.69□□□□□ -0.38
SNRPD3-204ENST00000439775 MC5RP33032 325 aa12.69□□□□□ -0.38
SNRPD3-204ENST00000439775 PSMD7P51665 324 aa12.69□□□□□ -0.38
SNRPD3-204ENST00000439775 CRIP2P52943 208 aaPredicted RBP12.69□□□□□ -0.38
SNRPD3-204ENST00000439775 TMEM50BP56557 158 aa12.69□□□□□ -0.38
SNRPD3-204ENST00000439775 DGCR2P98153 550 aa12.69□□□□□ -0.38
SNRPD3-204ENST00000439775 RUNX1Q01196 453 aa12.69□□□□□ -0.38
SNRPD3-204ENST00000439775 RPL39P5Q59GN2 51 aa12.69□□□□□ -0.38
SNRPD3-204ENST00000439775 DEFB121Q5J5C9 76 aa12.69□□□□□ -0.38
SNRPD3-204ENST00000439775 C9orf66Q5T8R8 295 aa12.69□□□□□ -0.38
SNRPD3-204ENST00000439775 TMEM65Q6PI78 240 aa12.69□□□□□ -0.38
SNRPD3-204ENST00000439775 OR5AN1Q8NGI8 311 aa12.69□□□□□ -0.38
SNRPD3-204ENST00000439775 PTX4Q96A99 478 aa12.69□□□□□ -0.38
SNRPD3-204ENST00000439775 Q9N2K0 584 aa12.69□□□□□ -0.38
SNRPD3-204ENST00000439775 WSB1Q9Y6I7 421 aa12.69□□□□□ -0.38
SNRPD3-204ENST00000439775 COL7A1Q02388 2944 aa12.69□□□□□ -0.38
SNRPD3-204ENST00000439775 H0YJW9 148 aa12.68□□□□□ -0.38
SNRPD3-204ENST00000439775 LDLRAD4O15165 306 aa12.68□□□□□ -0.38
SNRPD3-204ENST00000439775 RBBP9O75884 186 aa12.68□□□□□ -0.38
SNRPD3-204ENST00000439775 VEGFCP49767 419 aa12.68□□□□□ -0.38
SNRPD3-204ENST00000439775 KIAA0141Q14154 515 aaPredicted RBP12.68□□□□□ -0.38
SNRPD3-204ENST00000439775 C19orf54Q5BKX5 351 aa12.68□□□□□ -0.38
SNRPD3-204ENST00000439775 ZNF367Q7RTV3 350 aa12.68□□□□□ -0.38
SNRPD3-204ENST00000439775 ZNF491Q8N8L2 437 aa12.68□□□□□ -0.38
SNRPD3-204ENST00000439775 MINDY2Q8NBR6 621 aa12.68□□□□□ -0.38
SNRPD3-204ENST00000439775 OR56B1Q8NGI3 324 aa12.68□□□□□ -0.38
SNRPD3-204ENST00000439775 FAM3DQ96BQ1 224 aa12.68□□□□□ -0.38
SNRPD3-204ENST00000439775 ARHGAP5-AS1Q96IT6 56 aa12.68□□□□□ -0.38
SNRPD3-204ENST00000439775 ABHD14BQ96IU4 210 aa12.68□□□□□ -0.38
SNRPD3-204ENST00000439775 B9D2Q9BPU9 175 aa12.68□□□□□ -0.38
SNRPD3-204ENST00000439775 PECRQ9BY49 303 aa12.68□□□□□ -0.38
SNRPD3-204ENST00000439775 C11orf54Q9H0W9 315 aaPredicted RBP12.68□□□□□ -0.38
SNRPD3-204ENST00000439775 OR1A1Q9P1Q5 309 aa12.68□□□□□ -0.38
SNRPD3-204ENST00000439775 BLOC1S6Q9UL45 172 aa12.68□□□□□ -0.38
SNRPD3-204ENST00000439775 VSIG4Q9Y279 399 aa12.68□□□□□ -0.38
SNRPD3-204ENST00000439775 WASHC3Q9Y3C0 194 aa12.68□□□□□ -0.38
SNRPD3-204ENST00000439775 V9GY05 133 aa12.68□□□□□ -0.38
SNRPD3-204ENST00000439775 I3L521 148 aa12.67□□□□□ -0.38
SNRPD3-204ENST00000439775 RRHO14718 337 aa12.67□□□□□ -0.38
SNRPD3-204ENST00000439775 HSPA12AO43301 675 aa12.67□□□□□ -0.38
SNRPD3-204ENST00000439775 SCTP09683 121 aa12.67□□□□□ -0.38
SNRPD3-204ENST00000439775 CEACAM6P40199 344 aa12.67□□□□□ -0.38
SNRPD3-204ENST00000439775 MAP2K4P45985 399 aa12.67□□□□□ -0.38
SNRPD3-204ENST00000439775 LUMP51884 338 aaPredicted RBP12.67□□□□□ -0.38
SNRPD3-204ENST00000439775 CLDN12P56749 244 aa12.67□□□□□ -0.38
SNRPD3-204ENST00000439775 NDPQ00604 133 aa12.67□□□□□ -0.38
SNRPD3-204ENST00000439775 VAX1Q5SQQ9 334 aa12.67□□□□□ -0.38
SNRPD3-204ENST00000439775 ZNF660Q6AZW8 331 aaPredicted RBP12.67□□□□□ -0.38
SNRPD3-204ENST00000439775 IZUMO2Q6UXV1 221 aa12.67□□□□□ -0.38
SNRPD3-204ENST00000439775 TCTEX1D1Q8N7M0 179 aa12.67□□□□□ -0.38
SNRPD3-204ENST00000439775 OR11H1Q8NG94 326 aa12.67□□□□□ -0.38
SNRPD3-204ENST00000439775 RNF5Q99942 180 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms