RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 MAGT1Q9H0U3 335 aa9.78□□□□□ -0.84
SMAD3-202ENST00000439724 WFDC1Q9HC57 220 aa9.78□□□□□ -0.84
SMAD3-202ENST00000439724 COA4Q9NYJ1 87 aa9.78□□□□□ -0.84
SMAD3-202ENST00000439724 CALYQ9NYX4 217 aa9.78□□□□□ -0.84
SMAD3-202ENST00000439724 LPAR3Q9UBY5 353 aa9.78□□□□□ -0.84
SMAD3-202ENST00000439724 CACNG5Q9UF02 275 aa9.78□□□□□ -0.84
SMAD3-202ENST00000439724 PSG11Q9UQ72 335 aa9.78□□□□□ -0.84
SMAD3-202ENST00000439724 CFAP47Q6ZTR5 3102 aa9.78□□□□□ -0.84
SMAD3-202ENST00000439724 CEP295Q9C0D2 2601 aa9.77□□□□□ -0.84
SMAD3-202ENST00000439724 NUDT19A8MXV4 375 aa9.77□□□□□ -0.84
SMAD3-202ENST00000439724 KRBOX1C9JBD0 128 aa9.77□□□□□ -0.84
SMAD3-202ENST00000439724 E7EQL1 145 aa9.77□□□□□ -0.84
SMAD3-202ENST00000439724 LGALS8O00214 317 aa9.77□□□□□ -0.84
SMAD3-202ENST00000439724 SIGLEC5O15389 551 aa9.77□□□□□ -0.84
SMAD3-202ENST00000439724 ST8SIA5O15466 376 aa9.77□□□□□ -0.84
SMAD3-202ENST00000439724 ATG12O94817 140 aa9.77□□□□□ -0.84
SMAD3-202ENST00000439724 TMEM50AO95807 157 aa9.77□□□□□ -0.84
SMAD3-202ENST00000439724 CLDN1O95832 211 aa9.77□□□□□ -0.84
SMAD3-202ENST00000439724 P0C879 139 aa9.77□□□□□ -0.84
SMAD3-202ENST00000439724 SELLP14151 372 aa9.77□□□□□ -0.84
SMAD3-202ENST00000439724 CAV2P51636 162 aa9.77□□□□□ -0.84
SMAD3-202ENST00000439724 NHLH2Q02577 135 aa9.77□□□□□ -0.84
SMAD3-202ENST00000439724 BAXQ07812 192 aa9.77□□□□□ -0.84
SMAD3-202ENST00000439724 EFNB3Q15768 340 aa9.77□□□□□ -0.84
SMAD3-202ENST00000439724 C17orf58Q2M2W7 97 aa9.77□□□□□ -0.84
SMAD3-202ENST00000439724 TMEM30BQ3MIR4 351 aa9.77□□□□□ -0.84
SMAD3-202ENST00000439724 CLEC9AQ6UXN8 241 aa9.77□□□□□ -0.84
SMAD3-202ENST00000439724 ZNF808Q8N4W9 903 aaPredicted RBP9.77□□□□□ -0.84
SMAD3-202ENST00000439724 OR1S2Q8NGQ3 325 aa9.77□□□□□ -0.84
SMAD3-202ENST00000439724 SMIM8Q96KF7 97 aa9.77□□□□□ -0.84
SMAD3-202ENST00000439724 RAB40CQ96S21 281 aa9.77□□□□□ -0.84
SMAD3-202ENST00000439724 GINS3Q9BRX5 216 aa9.77□□□□□ -0.84
SMAD3-202ENST00000439724 PRORYQ9H606 182 aa9.77□□□□□ -0.84
SMAD3-202ENST00000439724 GNG12Q9UBI6 72 aa9.77□□□□□ -0.84
SMAD3-202ENST00000439724 MMP24Q9Y5R2 645 aa9.77□□□□□ -0.84
SMAD3-202ENST00000439724 PCNX1Q96RV3 2341 aa9.77□□□□□ -0.85
SMAD3-202ENST00000439724 MAP1BP46821 2468 aaKnown RBP9.77□□□□□ -0.85
SMAD3-202ENST00000439724 RAB19A4D1S5 217 aa9.77□□□□□ -0.85
SMAD3-202ENST00000439724 NKX6-3A6NJ46 265 aa9.77□□□□□ -0.85
SMAD3-202ENST00000439724 FAM90A27PA6NNH2 459 aa9.77□□□□□ -0.85
SMAD3-202ENST00000439724 DEFB108AA8MXU0 73 aa9.77□□□□□ -0.85
SMAD3-202ENST00000439724 FAM90A26D6RGX4 464 aa9.77□□□□□ -0.85
SMAD3-202ENST00000439724 TEX46H3BTG2 121 aa9.77□□□□□ -0.85
SMAD3-202ENST00000439724 CHST1O43916 411 aa9.77□□□□□ -0.85
SMAD3-202ENST00000439724 GYPAP02724 150 aa9.77□□□□□ -0.85
SMAD3-202ENST00000439724 CD3EP07766 207 aa9.77□□□□□ -0.85
SMAD3-202ENST00000439724 SEC11BP0C7V7 166 aa9.77□□□□□ -0.85
SMAD3-202ENST00000439724 SFTPCP11686 197 aa9.77□□□□□ -0.85
SMAD3-202ENST00000439724 PAX9P55771 341 aa9.77□□□□□ -0.85
SMAD3-202ENST00000439724 SWI5Q1ZZU3 235 aa9.77□□□□□ -0.85
SMAD3-202ENST00000439724 Q3ZCU0 254 aa9.77□□□□□ -0.85
SMAD3-202ENST00000439724 DUX4L9Q6RFH8 374 aaPredicted RBP9.77□□□□□ -0.85
SMAD3-202ENST00000439724 UQCC3Q6UW78 93 aa9.77□□□□□ -0.85
SMAD3-202ENST00000439724 TGIF2LYQ8IUE0 185 aa9.77□□□□□ -0.85
SMAD3-202ENST00000439724 ODF3L1Q8IXM7 274 aa9.77□□□□□ -0.85
SMAD3-202ENST00000439724 C1orf87Q8N0U7 546 aa9.77□□□□□ -0.85
SMAD3-202ENST00000439724 TCTEX1D2Q8WW35 142 aa9.77□□□□□ -0.85
SMAD3-202ENST00000439724 ZCCHC14Q8WYQ9 949 aaKnown RBP9.77□□□□□ -0.85
SMAD3-202ENST00000439724 CORO2AQ92828 525 aa9.77□□□□□ -0.85
SMAD3-202ENST00000439724 MARC2Q969Z3 335 aa9.77□□□□□ -0.85
SMAD3-202ENST00000439724 CCL13Q99616 98 aa9.77□□□□□ -0.85
SMAD3-202ENST00000439724 LINC00574Q9H8X3 128 aa9.77□□□□□ -0.85
SMAD3-202ENST00000439724 SAP30LQ9HAJ7 183 aa9.77□□□□□ -0.85
SMAD3-202ENST00000439724 DCAF16Q9NXF7 216 aa9.77□□□□□ -0.85
SMAD3-202ENST00000439724 TAS2R3Q9NYW6 316 aa9.77□□□□□ -0.85
SMAD3-202ENST00000439724 COQ3Q9NZJ6 369 aa9.77□□□□□ -0.85
SMAD3-202ENST00000439724 NDRG3Q9UGV2 375 aa9.77□□□□□ -0.85
SMAD3-202ENST00000439724 GAB2Q9UQC2 676 aa9.77□□□□□ -0.85
SMAD3-202ENST00000439724 LAMP3Q9UQV4 416 aa9.77□□□□□ -0.85
SMAD3-202ENST00000439724 POLEQ07864 2286 aa9.76□□□□□ -0.85
SMAD3-202ENST00000439724 TRGV10A0A0A0MS01 117 aa9.76□□□□□ -0.85
SMAD3-202ENST00000439724 TRAV38-1A0A0B4J264 116 aa9.76□□□□□ -0.85
SMAD3-202ENST00000439724 KBTBD11-OT1A0A1B0GTJ5 212 aa9.76□□□□□ -0.85
SMAD3-202ENST00000439724 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.76□□□□□ -0.85
SMAD3-202ENST00000439724 MEX3AA1L020 520 aaKnown RBP9.76□□□□□ -0.85
SMAD3-202ENST00000439724 ZNF729A6NN14 1252 aaPredicted RBP9.76□□□□□ -0.85
SMAD3-202ENST00000439724 C17orf98A8MV24 154 aa9.76□□□□□ -0.85
SMAD3-202ENST00000439724 ZNF705EA8MWA4 302 aaPredicted RBP9.76□□□□□ -0.85
SMAD3-202ENST00000439724 DLL1O00548 723 aa9.76□□□□□ -0.85
SMAD3-202ENST00000439724 RAMP3O60896 148 aa9.76□□□□□ -0.85
SMAD3-202ENST00000439724 SPP1P10451 314 aa9.76□□□□□ -0.85
SMAD3-202ENST00000439724 APOBEC3AP31941 199 aaPredicted RBP9.76□□□□□ -0.85
SMAD3-202ENST00000439724 GPR12P47775 334 aa9.76□□□□□ -0.85
SMAD3-202ENST00000439724 BRWD1-AS2P59051 145 aa9.76□□□□□ -0.85
SMAD3-202ENST00000439724 RPL23AP62750 156 aaKnown RBP9.76□□□□□ -0.85
SMAD3-202ENST00000439724 ADORA2A-AS1P86434 159 aa9.76□□□□□ -0.85
SMAD3-202ENST00000439724 ZNF266Q14584 549 aa9.76□□□□□ -0.85
SMAD3-202ENST00000439724 LTC4SQ16873 150 aa9.76□□□□□ -0.85
SMAD3-202ENST00000439724 IZUMO4Q1ZYL8 232 aa9.76□□□□□ -0.85
SMAD3-202ENST00000439724 MST1LQ2TV78 715 aa9.76□□□□□ -0.85
SMAD3-202ENST00000439724 BTNL3Q6UXE8 466 aa9.76□□□□□ -0.85
SMAD3-202ENST00000439724 UNQ6494/PRO21346Q6UXR6 183 aa9.76□□□□□ -0.85
SMAD3-202ENST00000439724 TCF23Q7RTU1 214 aa9.76□□□□□ -0.85
SMAD3-202ENST00000439724 ZNF295-AS1Q8N0V1 137 aa9.76□□□□□ -0.85
SMAD3-202ENST00000439724 SPAG16Q8N0X2 631 aa9.76□□□□□ -0.85
SMAD3-202ENST00000439724 FGFRL1Q8N441 504 aa9.76□□□□□ -0.85
SMAD3-202ENST00000439724 FAM216BQ8N7L0 139 aa9.76□□□□□ -0.85
SMAD3-202ENST00000439724 DEFB108BQ8NET1 73 aa9.76□□□□□ -0.85
SMAD3-202ENST00000439724 LRRC46Q96FV0 321 aa9.76□□□□□ -0.85
SMAD3-202ENST00000439724 LINC00052Q96N35 136 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 159.6 ms