RNA–Protein interactions for RNA: ENST00000439512.5

TOM1-207, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 3

Gene TOM1, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-207ENST00000439512 ITGB1BP1O14713 200 aa13.11□□□□□ -0.31
TOM1-207ENST00000439512 RAB29O14966 203 aa13.11□□□□□ -0.31
TOM1-207ENST00000439512 BET1O15155 118 aa13.11□□□□□ -0.31
TOM1-207ENST00000439512 SCGNO76038 276 aa13.11□□□□□ -0.31
TOM1-207ENST00000439512 SCAND1P57086 179 aa13.11□□□□□ -0.31
TOM1-207ENST00000439512 LSAMPQ13449 338 aa13.11□□□□□ -0.31
TOM1-207ENST00000439512 RPL39P5Q59GN2 51 aa13.11□□□□□ -0.31
TOM1-207ENST00000439512 IGSF11Q5DX21 431 aa13.11□□□□□ -0.31
TOM1-207ENST00000439512 HACD4Q5VWC8 232 aa13.11□□□□□ -0.31
TOM1-207ENST00000439512 TREML4Q6UXN2 200 aa13.11□□□□□ -0.31
TOM1-207ENST00000439512 ZNF833PQ6ZTB9 187 aa13.11□□□□□ -0.31
TOM1-207ENST00000439512 Q8N6K4 173 aa13.11□□□□□ -0.31
TOM1-207ENST00000439512 OR13F1Q8NGS4 319 aa13.11□□□□□ -0.31
TOM1-207ENST00000439512 WIPF2Q8TF74 440 aaPredicted RBP13.11□□□□□ -0.31
TOM1-207ENST00000439512 EDARADDQ8WWZ3 215 aa13.11□□□□□ -0.31
TOM1-207ENST00000439512 S1PR3Q99500 378 aa13.11□□□□□ -0.31
TOM1-207ENST00000439512 NABP2Q9BQ15 211 aa13.11□□□□□ -0.31
TOM1-207ENST00000439512 AGMATQ9BSE5 352 aa13.11□□□□□ -0.31
TOM1-207ENST00000439512 ST6GALNAC5Q9BVH7 336 aa13.11□□□□□ -0.31
TOM1-207ENST00000439512 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.11□□□□□ -0.31
TOM1-207ENST00000439512 RDH8Q9NYR8 311 aa13.11□□□□□ -0.31
TOM1-207ENST00000439512 TRAV18A0A075B6X5 111 aa13.1□□□□□ -0.31
TOM1-207ENST00000439512 TMEM235A6NFC5 223 aa13.1□□□□□ -0.31
TOM1-207ENST00000439512 FGF16O43320 207 aa13.1□□□□□ -0.31
TOM1-207ENST00000439512 GSTP1P09211 210 aaKnown RBP13.1□□□□□ -0.31
TOM1-207ENST00000439512 CD28P10747 220 aa13.1□□□□□ -0.31
TOM1-207ENST00000439512 SERPINB10P48595 397 aa13.1□□□□□ -0.31
TOM1-207ENST00000439512 VBP1P61758 197 aa13.1□□□□□ -0.31
TOM1-207ENST00000439512 NCS1P62166 190 aa13.1□□□□□ -0.31
TOM1-207ENST00000439512 ZNF260Q3ZCT1 412 aa13.1□□□□□ -0.31
TOM1-207ENST00000439512 OR5AU1Q8NGC0 362 aa13.1□□□□□ -0.31
TOM1-207ENST00000439512 OR10J5Q8NHC4 309 aa13.1□□□□□ -0.31
TOM1-207ENST00000439512 SLC25A38Q96DW6 304 aa13.1□□□□□ -0.31
TOM1-207ENST00000439512 ZNF251Q9BRH9 671 aa13.1□□□□□ -0.31
TOM1-207ENST00000439512 GHITMQ9H3K2 345 aa13.1□□□□□ -0.31
TOM1-207ENST00000439512 PLSCR3Q9NRY6 295 aa13.1□□□□□ -0.31
TOM1-207ENST00000439512 SPATA2Q9UM82 520 aa13.1□□□□□ -0.31
TOM1-207ENST00000439512 MGAM2Q2M2H8 2515 aa13.09□□□□□ -0.31
TOM1-207ENST00000439512 VWFP04275 2813 aa13.09□□□□□ -0.31
TOM1-207ENST00000439512 IGKV1D-8A0A087WSZ0 117 aa13.09□□□□□ -0.31
TOM1-207ENST00000439512 TMEM127O75204 238 aa13.09□□□□□ -0.31
TOM1-207ENST00000439512 FBXO24O75426 580 aa13.09□□□□□ -0.31
TOM1-207ENST00000439512 F2RL1P55085 397 aa13.09□□□□□ -0.31
TOM1-207ENST00000439512 GNG2P59768 71 aa13.09□□□□□ -0.31
TOM1-207ENST00000439512 PITPNAQ00169 270 aa13.09□□□□□ -0.31
TOM1-207ENST00000439512 SRSF7Q16629 238 aaKnown RBP eCLIP13.09□□□□□ -0.31
TOM1-207ENST00000439512 NUDCD2Q8WVJ2 157 aa13.09□□□□□ -0.31
TOM1-207ENST00000439512 DIABLOQ9NR28 239 aa13.09□□□□□ -0.31
TOM1-207ENST00000439512 ZNF221Q9UK13 617 aa13.09□□□□□ -0.31
TOM1-207ENST00000439512 TRBV6-7A0A0A0MS04 114 aa13.08□□□□□ -0.32
TOM1-207ENST00000439512 OR8U9P0C7N5 309 aa13.08□□□□□ -0.32
TOM1-207ENST00000439512 CT45A6P0DMU7 189 aa13.08□□□□□ -0.32
TOM1-207ENST00000439512 CT45A5P0DMU8 189 aa13.08□□□□□ -0.32
TOM1-207ENST00000439512 CT45A7P0DMV0 189 aa13.08□□□□□ -0.32
TOM1-207ENST00000439512 DTYMKP23919 212 aa13.08□□□□□ -0.32
TOM1-207ENST00000439512 PNLIPRP3Q17RR3 467 aa13.08□□□□□ -0.32
TOM1-207ENST00000439512 FAM71F2Q6NXP2 309 aa13.08□□□□□ -0.32
TOM1-207ENST00000439512 GLDNQ6ZMI3 551 aaPredicted RBP13.08□□□□□ -0.32
TOM1-207ENST00000439512 Q8N9W7 124 aa13.08□□□□□ -0.32
TOM1-207ENST00000439512 OR8H1Q8NGG4 311 aa13.08□□□□□ -0.32
TOM1-207ENST00000439512 OR8U1Q8NH10 309 aa13.08□□□□□ -0.32
TOM1-207ENST00000439512 RITA1Q96K30 269 aa13.08□□□□□ -0.32
TOM1-207ENST00000439512 RASL11BQ9BPW5 248 aa13.08□□□□□ -0.32
TOM1-207ENST00000439512 CABLES2Q9BTV7 478 aa13.08□□□□□ -0.32
TOM1-207ENST00000439512 MRPS26Q9BYN8 205 aaKnown RBP13.08□□□□□ -0.32
TOM1-207ENST00000439512 LINC01548A6NM66 108 aa13.07□□□□□ -0.32
TOM1-207ENST00000439512 SSX5O60225 188 aa13.07□□□□□ -0.32
TOM1-207ENST00000439512 PROP1O75360 226 aa13.07□□□□□ -0.32
TOM1-207ENST00000439512 CSF1P09603 554 aa13.07□□□□□ -0.32
TOM1-207ENST00000439512 GPR12P47775 334 aa13.07□□□□□ -0.32
TOM1-207ENST00000439512 ACTBP60709 375 aa13.07□□□□□ -0.32
TOM1-207ENST00000439512 C2orf68Q2NKX9 166 aa13.07□□□□□ -0.32
TOM1-207ENST00000439512 NSUN5P1Q3KNT7 163 aa13.07□□□□□ -0.32
TOM1-207ENST00000439512 Q6ZS49 121 aa13.07□□□□□ -0.32
TOM1-207ENST00000439512 SLC35E3Q7Z769 313 aa13.07□□□□□ -0.32
TOM1-207ENST00000439512 DRAXINQ8NBI3 349 aaPredicted RBP13.07□□□□□ -0.32
TOM1-207ENST00000439512 FAM110DQ8TAY7 271 aaPredicted RBP13.07□□□□□ -0.32
TOM1-207ENST00000439512 SLC25A46Q96AG3 418 aa13.07□□□□□ -0.32
TOM1-207ENST00000439512 S100A16Q96FQ6 103 aaKnown RBP13.07□□□□□ -0.32
TOM1-207ENST00000439512 CITED2Q99967 270 aaPredicted RBP13.07□□□□□ -0.32
TOM1-207ENST00000439512 GINS4Q9BRT9 223 aa13.07□□□□□ -0.32
TOM1-207ENST00000439512 NAA50Q9GZZ1 169 aaKnown RBP13.07□□□□□ -0.32
TOM1-207ENST00000439512 TOLLIPQ9H0E2 274 aa13.07□□□□□ -0.32
TOM1-207ENST00000439512 DCSTAMPQ9H295 470 aa13.07□□□□□ -0.32
TOM1-207ENST00000439512 LIN7CQ9NUP9 197 aaKnown RBP13.07□□□□□ -0.32
TOM1-207ENST00000439512 LINC00527Q9UJ94 153 aa13.07□□□□□ -0.32
TOM1-207ENST00000439512 A0A0A6YYH2 397 aa13.06□□□□□ -0.32
TOM1-207ENST00000439512 A6NJ64 397 aa13.06□□□□□ -0.32
TOM1-207ENST00000439512 TSPAN15O95858 294 aa13.06□□□□□ -0.32
TOM1-207ENST00000439512 IGHG2P01859 326 aa13.06□□□□□ -0.32
TOM1-207ENST00000439512 MMDQ15546 238 aa13.06□□□□□ -0.32
TOM1-207ENST00000439512 GPR107Q5VW38 600 aa13.06□□□□□ -0.32
TOM1-207ENST00000439512 C10orf99Q6UWK7 81 aa13.06□□□□□ -0.32
TOM1-207ENST00000439512 FAM131AQ6UXB0 335 aa13.06□□□□□ -0.32
TOM1-207ENST00000439512 ANKRD13BQ86YJ7 626 aa13.06□□□□□ -0.32
TOM1-207ENST00000439512 SAMD12Q8N8I0 201 aa13.06□□□□□ -0.32
TOM1-207ENST00000439512 NOL4LQ96MY1 436 aaPredicted RBP13.06□□□□□ -0.32
TOM1-207ENST00000439512 ABCG5Q9H222 651 aa13.06□□□□□ -0.32
TOM1-207ENST00000439512 RBM7Q9Y580 266 aaKnown RBP13.06□□□□□ -0.32
TOM1-207ENST00000439512 H7C2Y5 167 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms