RNA–Protein interactions for RNA: ENST00000439468.1

VPS41-207, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-207ENST00000439468 UPK2O00526 184 aa1.66□□□□□ -2.14
VPS41-207ENST00000439468 CDIPTO14735 213 aa1.66□□□□□ -2.14
VPS41-207ENST00000439468 CST4P01036 141 aa1.66□□□□□ -2.14
VPS41-207ENST00000439468 GABRA1P14867 456 aa1.66□□□□□ -2.14
VPS41-207ENST00000439468 GCLMP48507 274 aa1.66□□□□□ -2.14
VPS41-207ENST00000439468 AQP5P55064 265 aa1.66□□□□□ -2.14
VPS41-207ENST00000439468 HADHBP55084 474 aaKnown RBP1.66□□□□□ -2.14
VPS41-207ENST00000439468 DSTNP60981 165 aa1.66□□□□□ -2.14
VPS41-207ENST00000439468 VSNL1P62760 191 aa1.66□□□□□ -2.14
VPS41-207ENST00000439468 IHHQ14623 411 aa1.66□□□□□ -2.14
VPS41-207ENST00000439468 ANGPT1Q15389 498 aa1.66□□□□□ -2.14
VPS41-207ENST00000439468 TRIP13Q15645 432 aaPredicted RBP1.66□□□□□ -2.14
VPS41-207ENST00000439468 TAF9Q16594 264 aa1.66□□□□□ -2.14
VPS41-207ENST00000439468 TTMPQ5BVD1 217 aa1.66□□□□□ -2.14
VPS41-207ENST00000439468 MRPL2Q5T653 305 aaKnown RBP1.66□□□□□ -2.14
VPS41-207ENST00000439468 NXNL2Q5VZ03 156 aa1.66□□□□□ -2.14
VPS41-207ENST00000439468 HBMQ6B0K9 141 aa1.66□□□□□ -2.14
VPS41-207ENST00000439468 AHSA2Q719I0 299 aa1.66□□□□□ -2.14
VPS41-207ENST00000439468 DPPA2Q7Z7J5 298 aa1.66□□□□□ -2.14
VPS41-207ENST00000439468 NT5DC3Q86UY8 548 aa1.66□□□□□ -2.14
VPS41-207ENST00000439468 SPICQ8N5J4 248 aa1.66□□□□□ -2.14
VPS41-207ENST00000439468 GATD1Q8NB37 220 aa1.66□□□□□ -2.14
VPS41-207ENST00000439468 MUC7Q8TAX7 377 aa1.66□□□□□ -2.14
VPS41-207ENST00000439468 UPF3BQ9BZI7 483 aaKnown RBP1.66□□□□□ -2.14
VPS41-207ENST00000439468 GABARAPL1Q9H0R8 117 aa1.66□□□□□ -2.14
VPS41-207ENST00000439468 TXNIPQ9H3M7 391 aa1.66□□□□□ -2.14
VPS41-207ENST00000439468 MFSD1Q9H3U5 465 aa1.66□□□□□ -2.14
VPS41-207ENST00000439468 ASF1BQ9NVP2 202 aa1.66□□□□□ -2.14
VPS41-207ENST00000439468 TAS2R1Q9NYW7 299 aa1.66□□□□□ -2.14
VPS41-207ENST00000439468 MAT2BQ9NZL9 334 aa1.66□□□□□ -2.14
VPS41-207ENST00000439468 CARHSP1Q9Y2V2 147 aaKnown RBP1.66□□□□□ -2.14
VPS41-207ENST00000439468 FN1P02751 2386 aaKnown RBP1.66□□□□□ -2.14
VPS41-207ENST00000439468 NBEAL1Q6ZS30 2694 aa1.66□□□□□ -2.14
VPS41-207ENST00000439468 HIVEP1P15822 2718 aa1.66□□□□□ -2.14
VPS41-207ENST00000439468 HIVEP3Q5T1R4 2406 aa1.66□□□□□ -2.14
VPS41-207ENST00000439468 DOCK2Q92608 1830 aa1.66□□□□□ -2.14
VPS41-207ENST00000439468 EDC4Q6P2E9 1401 aaKnown RBP1.66□□□□□ -2.14
VPS41-207ENST00000439468 NRCAMQ92823 1304 aa1.66□□□□□ -2.14
VPS41-207ENST00000439468 USP9YO00507 2555 aaPredicted RBP1.65□□□□□ -2.14
VPS41-207ENST00000439468 KTN1Q86UP2 1357 aaKnown RBP1.65□□□□□ -2.15
VPS41-207ENST00000439468 PGPA6NDG6 321 aa1.65□□□□□ -2.15
VPS41-207ENST00000439468 LOC730098B7Z3J9 87 aa1.65□□□□□ -2.15
VPS41-207ENST00000439468 C15orf65H3BRN8 121 aa1.65□□□□□ -2.15
VPS41-207ENST00000439468 BRI3O95415 125 aa1.65□□□□□ -2.15
VPS41-207ENST00000439468 SCGB1C2P0DMR2 95 aa1.65□□□□□ -2.15
VPS41-207ENST00000439468 PRTN3P24158 256 aa1.65□□□□□ -2.15
VPS41-207ENST00000439468 TSPOP30536 169 aa1.65□□□□□ -2.15
VPS41-207ENST00000439468 HTR2BP41595 481 aa1.65□□□□□ -2.15
VPS41-207ENST00000439468 FOXA1P55317 472 aa1.65□□□□□ -2.15
VPS41-207ENST00000439468 DYNLL1P63167 89 aaKnown RBP1.65□□□□□ -2.15
VPS41-207ENST00000439468 PRDX1Q06830 199 aaKnown RBP1.65□□□□□ -2.15
VPS41-207ENST00000439468 TPBGQ13641 420 aa1.65□□□□□ -2.15
VPS41-207ENST00000439468 ZNF141Q15928 474 aa1.65□□□□□ -2.15
VPS41-207ENST00000439468 FBXO48Q5FWF7 155 aa1.65□□□□□ -2.15
VPS41-207ENST00000439468 AMMECR1LQ6DCA0 310 aa1.65□□□□□ -2.15
VPS41-207ENST00000439468 ELP2Q6IA86 826 aa1.65□□□□□ -2.15
VPS41-207ENST00000439468 SSX6Q7RTT6 188 aa1.65□□□□□ -2.15
VPS41-207ENST00000439468 PAGE2Q7Z2X7 111 aa1.65□□□□□ -2.15
VPS41-207ENST00000439468 TET1Q8NFU7 2136 aa1.65□□□□□ -2.15
VPS41-207ENST00000439468 OR4K17Q8NGC6 315 aa1.65□□□□□ -2.15
VPS41-207ENST00000439468 OR2Y1Q8NGV0 311 aa1.65□□□□□ -2.15
VPS41-207ENST00000439468 ACTL9Q8TC94 416 aa1.65□□□□□ -2.15
VPS41-207ENST00000439468 SCGB1C1Q8TD33 95 aa1.65□□□□□ -2.15
VPS41-207ENST00000439468 BIRC8Q96P09 236 aa1.65□□□□□ -2.15
VPS41-207ENST00000439468 OLFM3Q96PB7 478 aa1.65□□□□□ -2.15
VPS41-207ENST00000439468 APOL4Q9BPW4 351 aa1.65□□□□□ -2.15
VPS41-207ENST00000439468 TAPBPLQ9BX59 468 aa1.65□□□□□ -2.15
VPS41-207ENST00000439468 DIABLOQ9NR28 239 aa1.65□□□□□ -2.15
VPS41-207ENST00000439468 C14orf166Q9Y224 244 aaKnown RBP1.65□□□□□ -2.15
VPS41-207ENST00000439468 ATAD5Q96QE3 1844 aa1.65□□□□□ -2.15
VPS41-207ENST00000439468 PRR14LQ5THK1 2151 aa1.65□□□□□ -2.15
VPS41-207ENST00000439468 MYO7AQ13402 2215 aa1.64□□□□□ -2.15
VPS41-207ENST00000439468 CELSR2Q9HCU4 2923 aa1.64□□□□□ -2.15
VPS41-207ENST00000439468 SIPA1L1O43166 1804 aa1.64□□□□□ -2.15
VPS41-207ENST00000439468 ATG2BQ96BY7 2078 aa1.64□□□□□ -2.15
VPS41-207ENST00000439468 IGHV3-43A0A0B4J1X8 118 aa1.64□□□□□ -2.15
VPS41-207ENST00000439468 GMNCA6NCL1 334 aa1.64□□□□□ -2.15
VPS41-207ENST00000439468 A6NED7 52 aa1.64□□□□□ -2.15
VPS41-207ENST00000439468 F5H5P2 479 aa1.64□□□□□ -2.15
VPS41-207ENST00000439468 F8VP50 259 aa1.64□□□□□ -2.15
VPS41-207ENST00000439468 K7ERS5 55 aa1.64□□□□□ -2.15
VPS41-207ENST00000439468 SLC37A4O43826 429 aa1.64□□□□□ -2.15
VPS41-207ENST00000439468 CPSF4O95639 269 aaKnown RBP1.64□□□□□ -2.15
VPS41-207ENST00000439468 CECR9P0C854 216 aa1.64□□□□□ -2.15
VPS41-207ENST00000439468 PTHLHP12272 177 aa1.64□□□□□ -2.15
VPS41-207ENST00000439468 GTF2F2P13984 249 aa1.64□□□□□ -2.15
VPS41-207ENST00000439468 ZNF3P17036 446 aa1.64□□□□□ -2.15
VPS41-207ENST00000439468 OR2B6P58173 313 aa1.64□□□□□ -2.15
VPS41-207ENST00000439468 OR10A3P58181 314 aa1.64□□□□□ -2.15
VPS41-207ENST00000439468 HBG1P69891 147 aa1.64□□□□□ -2.15
VPS41-207ENST00000439468 HBG2P69892 147 aa1.64□□□□□ -2.15
VPS41-207ENST00000439468 BAXQ07812 192 aa1.64□□□□□ -2.15
VPS41-207ENST00000439468 PSG3Q16557 428 aa1.64□□□□□ -2.15
VPS41-207ENST00000439468 CEACAM21Q3KPI0 293 aa1.64□□□□□ -2.15
VPS41-207ENST00000439468 CLEC20AQ6ZU45 233 aa1.64□□□□□ -2.15
VPS41-207ENST00000439468 C10orf107Q8IVU9 208 aa1.64□□□□□ -2.15
VPS41-207ENST00000439468 TCAIMQ8N3R3 496 aa1.64□□□□□ -2.15
VPS41-207ENST00000439468 YIPF5Q969M3 257 aa1.64□□□□□ -2.15
VPS41-207ENST00000439468 PGLYRP3Q96LB9 341 aa1.64□□□□□ -2.15
VPS41-207ENST00000439468 TM2D3Q9BRN9 247 aa1.64□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms