RNA–Protein interactions for RNA: ENST00000439274.6

APP-208, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 2,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-208ENST00000439274 LURAP1LQ8IV03 231 aa12.97□□□□□ -0.33
APP-208ENST00000439274 TAF15Q92804 592 aaKnown RBP eCLIP12.97□□□□□ -0.33
APP-208ENST00000439274 SPRY4Q9C004 299 aa12.97□□□□□ -0.33
APP-208ENST00000439274 OR2J1Q9GZK6 312 aa12.97□□□□□ -0.33
APP-208ENST00000439274 SEC14L6B5MCN3 397 aa12.96□□□□□ -0.33
APP-208ENST00000439274 WNT2P09544 360 aa12.96□□□□□ -0.33
APP-208ENST00000439274 MEOX1P50221 254 aa12.96□□□□□ -0.33
APP-208ENST00000439274 DCAF10Q5QP82 559 aa12.96□□□□□ -0.33
APP-208ENST00000439274 RPP25LQ8N5L8 163 aaKnown RBP12.96□□□□□ -0.33
APP-208ENST00000439274 BCL2L2Q92843 193 aaPredicted RBP12.96□□□□□ -0.33
APP-208ENST00000439274 RTL8AQ9BWD3 113 aa12.96□□□□□ -0.33
APP-208ENST00000439274 GP6Q9HCN6 339 aa12.96□□□□□ -0.33
APP-208ENST00000439274 VAX2Q9UIW0 290 aa12.96□□□□□ -0.33
APP-208ENST00000439274 LRP5LA4QPB2 252 aa12.96□□□□□ -0.34
APP-208ENST00000439274 NXPH2O95156 264 aa12.96□□□□□ -0.34
APP-208ENST00000439274 PGA5P0DJD9 388 aa12.96□□□□□ -0.34
APP-208ENST00000439274 RND2P52198 227 aa12.96□□□□□ -0.34
APP-208ENST00000439274 PNRC1Q12796 327 aaPredicted RBP12.96□□□□□ -0.34
APP-208ENST00000439274 ZNF808Q8N4W9 903 aaPredicted RBP12.96□□□□□ -0.34
APP-208ENST00000439274 LHX4Q969G2 390 aa12.96□□□□□ -0.34
APP-208ENST00000439274 DEFB127Q9H1M4 99 aa12.96□□□□□ -0.34
APP-208ENST00000439274 RYDENQ9NUL5 291 aaKnown RBP12.96□□□□□ -0.34
APP-208ENST00000439274 GPR179Q6PRD1 2367 aa12.95□□□□□ -0.34
APP-208ENST00000439274 ZNF737O75373 536 aa12.95□□□□□ -0.34
APP-208ENST00000439274 KRASP01116 189 aa12.95□□□□□ -0.34
APP-208ENST00000439274 TFF1P04155 84 aa12.95□□□□□ -0.34
APP-208ENST00000439274 GRPP07492 148 aa12.95□□□□□ -0.34
APP-208ENST00000439274 G6PCP35575 357 aa12.95□□□□□ -0.34
APP-208ENST00000439274 ERVK11-1P61568 191 aa12.95□□□□□ -0.34
APP-208ENST00000439274 SERF2P84101 59 aa12.95□□□□□ -0.34
APP-208ENST00000439274 ZNF816Q0VGE8 651 aaPredicted RBP12.95□□□□□ -0.34
APP-208ENST00000439274 WDR25Q64LD2 544 aaPredicted RBP12.95□□□□□ -0.34
APP-208ENST00000439274 MOB1BQ7L9L4 216 aa12.95□□□□□ -0.34
APP-208ENST00000439274 MRGPRGQ86SM5 289 aa12.95□□□□□ -0.34
APP-208ENST00000439274 OR1L1Q8NH94 360 aa12.95□□□□□ -0.34
APP-208ENST00000439274 C5orf30Q96GV9 206 aa12.95□□□□□ -0.34
APP-208ENST00000439274 WDYHV1Q96HA8 205 aa12.95□□□□□ -0.34
APP-208ENST00000439274 ARRDC1-AS1Q9H2J1 176 aa12.95□□□□□ -0.34
APP-208ENST00000439274 FABP4P15090 132 aa12.95□□□□□ -0.34
APP-208ENST00000439274 MPLP40238 635 aa12.95□□□□□ -0.34
APP-208ENST00000439274 CD81P60033 236 aa12.95□□□□□ -0.34
APP-208ENST00000439274 RPL30P62888 115 aaKnown RBP12.95□□□□□ -0.34
APP-208ENST00000439274 ADIRFQ15847 76 aa12.95□□□□□ -0.34
APP-208ENST00000439274 ACSM6Q6P461 480 aa12.95□□□□□ -0.34
APP-208ENST00000439274 OR13D1Q8NGV5 346 aa12.95□□□□□ -0.34
APP-208ENST00000439274 GATAD1Q8WUU5 269 aa12.95□□□□□ -0.34
APP-208ENST00000439274 SNX22Q96L94 193 aa12.95□□□□□ -0.34
APP-208ENST00000439274 PFDN5Q99471 154 aa12.95□□□□□ -0.34
APP-208ENST00000439274 STRADBQ9C0K7 418 aa12.95□□□□□ -0.34
APP-208ENST00000439274 SLC25A22Q9H936 323 aa12.95□□□□□ -0.34
APP-208ENST00000439274 CLN8Q9UBY8 286 aa12.95□□□□□ -0.34
APP-208ENST00000439274 PIGBOS1A0A0B4J2F0 54 aa12.94□□□□□ -0.34
APP-208ENST00000439274 TNFRSF9Q07011 255 aa12.94□□□□□ -0.34
APP-208ENST00000439274 NECAP1Q8NC96 275 aa12.94□□□□□ -0.34
APP-208ENST00000439274 MBNL3Q9NUK0 354 aaKnown RBP12.94□□□□□ -0.34
APP-208ENST00000439274 SLC39A9Q9NUM3 307 aa12.94□□□□□ -0.34
APP-208ENST00000439274 TREM2Q9NZC2 230 aa12.94□□□□□ -0.34
APP-208ENST00000439274 ABI3Q9P2A4 366 aa12.94□□□□□ -0.34
APP-208ENST00000439274 DOCK11Q5JSL3 2073 aa12.94□□□□□ -0.34
APP-208ENST00000439274 USF3Q68DE3 2245 aa12.94□□□□□ -0.34
APP-208ENST00000439274 PHOX2AO14813 284 aa12.94□□□□□ -0.34
APP-208ENST00000439274 PSPNO60542 156 aa12.94□□□□□ -0.34
APP-208ENST00000439274 FBXW9Q5XUX1 488 aa12.94□□□□□ -0.34
APP-208ENST00000439274 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.94□□□□□ -0.34
APP-208ENST00000439274 CXorf67Q86X51 503 aaPredicted RBP12.94□□□□□ -0.34
APP-208ENST00000439274 RPUSD4Q96CM3 377 aaKnown RBP12.94□□□□□ -0.34
APP-208ENST00000439274 P2RX4Q99571 388 aa12.94□□□□□ -0.34
APP-208ENST00000439274 SMIM7Q9BQ49 75 aa12.94□□□□□ -0.34
APP-208ENST00000439274 OR2D2Q9H210 308 aa12.94□□□□□ -0.34
APP-208ENST00000439274 TMEM242Q9NWH2 141 aa12.94□□□□□ -0.34
APP-208ENST00000439274 IL17BQ9UHF5 180 aa12.94□□□□□ -0.34
APP-208ENST00000439274 NBEAQ8NFP9 2946 aa12.93□□□□□ -0.34
APP-208ENST00000439274 SMPD2O60906 423 aa12.93□□□□□ -0.34
APP-208ENST00000439274 OR3A1P47881 315 aa12.93□□□□□ -0.34
APP-208ENST00000439274 IDH3GP51553 393 aaPredicted RBP12.93□□□□□ -0.34
APP-208ENST00000439274 TBC1D28Q2M2D7 210 aa12.93□□□□□ -0.34
APP-208ENST00000439274 TMEM14EPQ6UXP3 125 aa12.93□□□□□ -0.34
APP-208ENST00000439274 LINC00469Q8N7U9 141 aa12.93□□□□□ -0.34
APP-208ENST00000439274 OR52L2PQ8NGH6 319 aa12.93□□□□□ -0.34
APP-208ENST00000439274 ZPBPQ9BS86 351 aa12.93□□□□□ -0.34
APP-208ENST00000439274 KNTC1P50748 2209 aa12.93□□□□□ -0.34
APP-208ENST00000439274 ZNF729A6NN14 1252 aaPredicted RBP12.93□□□□□ -0.34
APP-208ENST00000439274 WNT9BO14905 357 aa12.93□□□□□ -0.34
APP-208ENST00000439274 LY86O95711 162 aa12.93□□□□□ -0.34
APP-208ENST00000439274 SP1P08047 785 aa12.93□□□□□ -0.34
APP-208ENST00000439274 DEFA4P12838 97 aa12.93□□□□□ -0.34
APP-208ENST00000439274 LINC00205P59089 165 aa12.93□□□□□ -0.34
APP-208ENST00000439274 PPP1CBP62140 327 aa12.93□□□□□ -0.34
APP-208ENST00000439274 SPINK9Q5DT21 86 aa12.93□□□□□ -0.34
APP-208ENST00000439274 BTNL3Q6UXE8 466 aa12.93□□□□□ -0.34
APP-208ENST00000439274 PINX1Q96BK5 328 aaKnown RBP12.93□□□□□ -0.34
APP-208ENST00000439274 PRDM13Q9H4Q3 707 aa12.93□□□□□ -0.34
APP-208ENST00000439274 POLDIP2Q9Y2S7 368 aa12.93□□□□□ -0.34
APP-208ENST00000439274 WIPI2Q9Y4P8 454 aa12.93□□□□□ -0.34
APP-208ENST00000439274 CACNA1DQ01668 2161 aa12.93□□□□□ -0.34
APP-208ENST00000439274 OR5H1A6NKK0 313 aa12.92□□□□□ -0.34
APP-208ENST00000439274 SH2D1BO14796 132 aa12.92□□□□□ -0.34
APP-208ENST00000439274 S1PR2O95136 353 aa12.92□□□□□ -0.34
APP-208ENST00000439274 IFNA1P01562 189 aa12.92□□□□□ -0.34
APP-208ENST00000439274 CLEC12BQ2HXU8 276 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms