RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 BEND2Q8NDZ0 799 aa16.89■□□□□ 0.29
CHD3-204ENST00000439235 OR11H6Q8NGC7 330 aa16.89■□□□□ 0.29
CHD3-204ENST00000439235 OR10X1Q8NGY0 326 aa16.89■□□□□ 0.29
CHD3-204ENST00000439235 CREB3L1Q96BA8 519 aa16.89■□□□□ 0.29
CHD3-204ENST00000439235 FAHD2AQ96GK7 314 aa16.89■□□□□ 0.29
CHD3-204ENST00000439235 AKR1E2Q96JD6 320 aa16.89■□□□□ 0.29
CHD3-204ENST00000439235 AGMATQ9BSE5 352 aa16.89■□□□□ 0.29
CHD3-204ENST00000439235 MMP28Q9H239 520 aa16.89■□□□□ 0.29
CHD3-204ENST00000439235 C7orf69Q9H7B7 122 aa16.89■□□□□ 0.29
CHD3-204ENST00000439235 PIPOXQ9P0Z9 390 aa16.89■□□□□ 0.29
CHD3-204ENST00000439235 GPR132Q9UNW8 380 aa16.89■□□□□ 0.29
CHD3-204ENST00000439235 AMMECR1Q9Y4X0 333 aaPredicted RBP16.89■□□□□ 0.29
CHD3-204ENST00000439235 DOCK11Q5JSL3 2073 aa16.89■□□□□ 0.29
CHD3-204ENST00000439235 GPR31O00270 319 aa16.88■□□□□ 0.29
CHD3-204ENST00000439235 HSD17B6O14756 317 aa16.88■□□□□ 0.29
CHD3-204ENST00000439235 H2AFB2P0C5Z0 115 aa16.88■□□□□ 0.29
CHD3-204ENST00000439235 SPNP16150 400 aa16.88■□□□□ 0.29
CHD3-204ENST00000439235 RIPPLY3P57055 190 aa16.88■□□□□ 0.29
CHD3-204ENST00000439235 KLRD1Q13241 179 aa16.88■□□□□ 0.29
CHD3-204ENST00000439235 HLA-DRB5Q30154 266 aa16.88■□□□□ 0.29
CHD3-204ENST00000439235 LDLRAD3Q86YD5 345 aa16.88■□□□□ 0.29
CHD3-204ENST00000439235 CMTM1Q8IZ96 169 aa16.88■□□□□ 0.29
CHD3-204ENST00000439235 LYG1Q8N1E2 194 aa16.88■□□□□ 0.29
CHD3-204ENST00000439235 CENPSQ8N2Z9 138 aa16.88■□□□□ 0.29
CHD3-204ENST00000439235 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.88■□□□□ 0.29
CHD3-204ENST00000439235 ZBTB34Q8NCN2 500 aa16.88■□□□□ 0.29
CHD3-204ENST00000439235 UPRTQ96BW1 309 aa16.88■□□□□ 0.29
CHD3-204ENST00000439235 CCL28Q9NRJ3 127 aa16.88■□□□□ 0.29
CHD3-204ENST00000439235 RNF150Q9ULK6 438 aa16.88■□□□□ 0.29
CHD3-204ENST00000439235 TRAV6A0A075B6T7 132 aa16.87■□□□□ 0.29
CHD3-204ENST00000439235 RAB29O14966 203 aa16.87■□□□□ 0.29
CHD3-204ENST00000439235 GNRHRP30968 328 aa16.87■□□□□ 0.29
CHD3-204ENST00000439235 TAS2R31P59538 309 aa16.87■□□□□ 0.29
CHD3-204ENST00000439235 PRB3Q04118 309 aaPredicted RBP16.87■□□□□ 0.29
CHD3-204ENST00000439235 ZNF626Q68DY1 528 aa16.87■□□□□ 0.29
CHD3-204ENST00000439235 HCP5Q6MZN7 132 aa16.87■□□□□ 0.29
CHD3-204ENST00000439235 TMED4Q7Z7H5 227 aa16.87■□□□□ 0.29
CHD3-204ENST00000439235 CCDC71LQ8N9Z2 235 aa16.87■□□□□ 0.29
CHD3-204ENST00000439235 LHX4Q969G2 390 aa16.87■□□□□ 0.29
CHD3-204ENST00000439235 ABHD14BQ96IU4 210 aa16.87■□□□□ 0.29
CHD3-204ENST00000439235 C5orf66Q9H5L9 145 aa16.87■□□□□ 0.29
CHD3-204ENST00000439235 FLVCR2Q9UPI3 526 aa16.87■□□□□ 0.29
CHD3-204ENST00000439235 GAB2Q9UQC2 676 aa16.87■□□□□ 0.29
CHD3-204ENST00000439235 CR1P17927 2039 aa16.86■□□□□ 0.29
CHD3-204ENST00000439235 ODF3BA8MYP8 253 aa16.86■□□□□ 0.29
CHD3-204ENST00000439235 RNASEK-C17orf49H0YIS7 233 aa16.86■□□□□ 0.29
CHD3-204ENST00000439235 IGLV1-47P01700 117 aa16.86■□□□□ 0.29
CHD3-204ENST00000439235 ARG1P05089 322 aa16.86■□□□□ 0.29
CHD3-204ENST00000439235 UBE2E1P51965 193 aa16.86■□□□□ 0.29
CHD3-204ENST00000439235 RAG2P55895 527 aa16.86■□□□□ 0.29
CHD3-204ENST00000439235 ZNF818PQ6ZRF7 136 aa16.86■□□□□ 0.29
CHD3-204ENST00000439235 BVESQ8NE79 360 aa16.86■□□□□ 0.29
CHD3-204ENST00000439235 MARVELD1Q9BSK0 173 aa16.86■□□□□ 0.29
CHD3-204ENST00000439235 SLC2A9Q9NRM0 540 aa16.86■□□□□ 0.29
CHD3-204ENST00000439235 SAA2-SAA4A0A096LPE2 208 aa16.85■□□□□ 0.29
CHD3-204ENST00000439235 INMT-MINDY4F8WBC2 141 aa16.85■□□□□ 0.29
CHD3-204ENST00000439235 PEX14O75381 377 aa16.85■□□□□ 0.29
CHD3-204ENST00000439235 SAA2P0DJI9 122 aaPredicted RBP16.85■□□□□ 0.29
CHD3-204ENST00000439235 PI3P19957 117 aa16.85■□□□□ 0.29
CHD3-204ENST00000439235 RND3P61587 244 aa16.85■□□□□ 0.29
CHD3-204ENST00000439235 PHLDA2Q53GA4 152 aa16.85■□□□□ 0.29
CHD3-204ENST00000439235 FAM71F2Q6NXP2 309 aa16.85■□□□□ 0.29
CHD3-204ENST00000439235 DRAM1Q8N682 238 aa16.85■□□□□ 0.29
CHD3-204ENST00000439235 OR4P4Q8NGL7 312 aa16.85■□□□□ 0.29
CHD3-204ENST00000439235 S1PR3Q99500 378 aa16.85■□□□□ 0.29
CHD3-204ENST00000439235 RTBDNQ9BSG5 229 aaPredicted RBP16.85■□□□□ 0.29
CHD3-204ENST00000439235 ZNRD1Q9P1U0 126 aa16.85■□□□□ 0.29
CHD3-204ENST00000439235 CSMD2Q7Z408 3487 aa16.84■□□□□ 0.29
CHD3-204ENST00000439235 DHFRP00374 187 aa16.84■□□□□ 0.29
CHD3-204ENST00000439235 HTR1DP28221 377 aa16.84■□□□□ 0.29
CHD3-204ENST00000439235 MECP2P51608 486 aaKnown RBP16.84■□□□□ 0.29
CHD3-204ENST00000439235 ZNF137PP52743 207 aa16.84■□□□□ 0.29
CHD3-204ENST00000439235 PIGPP57054 158 aa16.84■□□□□ 0.29
CHD3-204ENST00000439235 UBE2MP61081 183 aaKnown RBP16.84■□□□□ 0.29
CHD3-204ENST00000439235 C11orf88Q6PI97 169 aa16.84■□□□□ 0.29
CHD3-204ENST00000439235 SPNS3Q6ZMD2 512 aa16.84■□□□□ 0.29
CHD3-204ENST00000439235 ODF3L1Q8IXM7 274 aa16.84■□□□□ 0.29
CHD3-204ENST00000439235 C18orf12Q96KH6 178 aa16.84■□□□□ 0.29
CHD3-204ENST00000439235 SDHAF2Q9NX18 166 aa16.84■□□□□ 0.29
CHD3-204ENST00000439235 ABCA2Q9BZC7 2435 aa16.84■□□□□ 0.29
CHD3-204ENST00000439235 TRAV40A0A0B4J280 105 aa16.83■□□□□ 0.28
CHD3-204ENST00000439235 RNF212BA8MTL3 300 aa16.83■□□□□ 0.28
CHD3-204ENST00000439235 BUB1B-PAK6H3BSN5 160 aa16.83■□□□□ 0.28
CHD3-204ENST00000439235 IGLV2-14P01704 120 aa16.83■□□□□ 0.28
CHD3-204ENST00000439235 CEACAM3P40198 252 aa16.83■□□□□ 0.28
CHD3-204ENST00000439235 YLPM1P49750 1951 aaKnown RBP16.83■□□□□ 0.28
CHD3-204ENST00000439235 LGALS4P56470 323 aa16.83■□□□□ 0.28
CHD3-204ENST00000439235 RAB25P57735 213 aa16.83■□□□□ 0.28
CHD3-204ENST00000439235 MINOS1Q5TGZ0 78 aa16.83■□□□□ 0.28
CHD3-204ENST00000439235 GPR157Q5UAW9 335 aa16.83■□□□□ 0.28
CHD3-204ENST00000439235 ZNF66Q6ZN08 573 aa16.83■□□□□ 0.28
CHD3-204ENST00000439235 SLC25A42Q86VD7 318 aa16.83■□□□□ 0.28
CHD3-204ENST00000439235 PDZD9Q8IXQ8 264 aa16.83■□□□□ 0.28
CHD3-204ENST00000439235 ALX4Q9H161 411 aaPredicted RBP16.83■□□□□ 0.28
CHD3-204ENST00000439235 TBL2Q9Y4P3 447 aaKnown RBP16.83■□□□□ 0.28
CHD3-204ENST00000439235 MINOS1-NBL1R4GNA1 71 aa16.83■□□□□ 0.28
CHD3-204ENST00000439235 CENPVL3A0A0U1RRI6 287 aa16.82■□□□□ 0.28
CHD3-204ENST00000439235 M0R1X1 148 aa16.82■□□□□ 0.28
CHD3-204ENST00000439235 CD5LO43866 347 aa16.82■□□□□ 0.28
CHD3-204ENST00000439235 PRAF2O60831 178 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms