RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 SNRPCP09234 159 aaKnown RBP10.35□□□□□ -0.75
NEK1-201ENST00000439128 RNF224P0DH78 156 aa10.35□□□□□ -0.75
NEK1-201ENST00000439128 Q1RN00 199 aa10.35□□□□□ -0.75
NEK1-201ENST00000439128 CLEC9AQ6UXN8 241 aa10.35□□□□□ -0.75
NEK1-201ENST00000439128 FAM216BQ8N7L0 139 aa10.35□□□□□ -0.75
NEK1-201ENST00000439128 SOSTQ9BQB4 213 aa10.35□□□□□ -0.75
NEK1-201ENST00000439128 MIA3Q5JRA6 1907 aa10.35□□□□□ -0.75
NEK1-201ENST00000439128 SCN5AQ14524 2016 aa10.35□□□□□ -0.75
NEK1-201ENST00000439128 TCRBV4S1A1TA0A5B7 111 aa10.35□□□□□ -0.75
NEK1-201ENST00000439128 RAB19A4D1S5 217 aa10.35□□□□□ -0.75
NEK1-201ENST00000439128 K7ENP7 123 aa10.35□□□□□ -0.75
NEK1-201ENST00000439128 NEURL1O76050 574 aa10.35□□□□□ -0.75
NEK1-201ENST00000439128 IGKV3-20P01619 116 aa10.35□□□□□ -0.75
NEK1-201ENST00000439128 SCTP09683 121 aa10.35□□□□□ -0.75
NEK1-201ENST00000439128 ZNF154Q13106 437 aa10.35□□□□□ -0.75
NEK1-201ENST00000439128 C20orf204Q6ZNR8 217 aa10.35□□□□□ -0.75
NEK1-201ENST00000439128 C3orf56Q8N813 242 aa10.35□□□□□ -0.75
NEK1-201ENST00000439128 C8orf46Q8TAG6 207 aa10.35□□□□□ -0.75
NEK1-201ENST00000439128 IGHV3-35A0A0C4DH35 117 aa10.35□□□□□ -0.75
NEK1-201ENST00000439128 A0A1W2PPQ1 181 aa10.35□□□□□ -0.75
NEK1-201ENST00000439128 KLF7O75840 302 aaPredicted RBP10.35□□□□□ -0.75
NEK1-201ENST00000439128 USF1P22415 310 aaPredicted RBP10.35□□□□□ -0.75
NEK1-201ENST00000439128 TMEM78Q5T7P6 136 aa10.35□□□□□ -0.75
NEK1-201ENST00000439128 TEPPQ6URK8 271 aa10.35□□□□□ -0.75
NEK1-201ENST00000439128 MRPL24Q96A35 216 aaKnown RBP10.35□□□□□ -0.75
NEK1-201ENST00000439128 PRSS22Q9GZN4 317 aa10.35□□□□□ -0.75
NEK1-201ENST00000439128 ARL2-SNX15V9GYD0 113 aa10.35□□□□□ -0.75
NEK1-201ENST00000439128 TGFBR3LH3BV60 316 aa10.34□□□□□ -0.75
NEK1-201ENST00000439128 BCL2L11O43521 198 aa10.34□□□□□ -0.75
NEK1-201ENST00000439128 ZNF737O75373 536 aa10.34□□□□□ -0.75
NEK1-201ENST00000439128 SLC6A1P30531 599 aa10.34□□□□□ -0.75
NEK1-201ENST00000439128 ZNF66Q6ZN08 573 aa10.34□□□□□ -0.75
NEK1-201ENST00000439128 ZCCHC24Q8N2G6 241 aaKnown RBP10.34□□□□□ -0.75
NEK1-201ENST00000439128 RFLNBQ8N5W9 214 aa10.34□□□□□ -0.75
NEK1-201ENST00000439128 AMELYQ99218 206 aa10.34□□□□□ -0.75
NEK1-201ENST00000439128 MYOFQ9NZM1 2061 aa10.34□□□□□ -0.75
NEK1-201ENST00000439128 IGHV3-23P01764 117 aa10.34□□□□□ -0.75
NEK1-201ENST00000439128 PRB3Q04118 309 aaPredicted RBP10.34□□□□□ -0.75
NEK1-201ENST00000439128 RELQ04864 619 aaPredicted RBP10.34□□□□□ -0.75
NEK1-201ENST00000439128 BTN1A1Q13410 526 aa10.34□□□□□ -0.75
NEK1-201ENST00000439128 LRRC75BQ2VPJ9 315 aa10.34□□□□□ -0.75
NEK1-201ENST00000439128 ITLN2Q8WWU7 325 aaPredicted RBP10.34□□□□□ -0.75
NEK1-201ENST00000439128 TMEM56-RWDD3S4R434 201 aa10.34□□□□□ -0.75
NEK1-201ENST00000439128 IGLV3-12A0A075B6K2 115 aa10.34□□□□□ -0.75
NEK1-201ENST00000439128 TMSB15BA0A087X1C1 80 aa10.34□□□□□ -0.75
NEK1-201ENST00000439128 CORTO00230 105 aa10.34□□□□□ -0.75
NEK1-201ENST00000439128 ADAP1O75689 374 aa10.34□□□□□ -0.75
NEK1-201ENST00000439128 KIR2DL2P43627 348 aaPredicted RBP10.34□□□□□ -0.75
NEK1-201ENST00000439128 MVDP53602 400 aa10.34□□□□□ -0.75
NEK1-201ENST00000439128 LGALSLQ3ZCW2 172 aaPredicted RBP10.34□□□□□ -0.75
NEK1-201ENST00000439128 FAM162BQ5T6X4 162 aa10.34□□□□□ -0.75
NEK1-201ENST00000439128 SURF2Q15527 256 aaPredicted RBP10.34□□□□□ -0.75
NEK1-201ENST00000439128 WFIKKN1Q96NZ8 548 aa10.34□□□□□ -0.75
NEK1-201ENST00000439128 ZNF107Q9UII5 783 aaPredicted RBP10.34□□□□□ -0.75
NEK1-201ENST00000439128 MRPS18CQ9Y3D5 142 aaKnown RBP10.34□□□□□ -0.75
NEK1-201ENST00000439128 MMP24Q9Y5R2 645 aa10.34□□□□□ -0.75
NEK1-201ENST00000439128 J3QW42 95 aa10.33□□□□□ -0.76
NEK1-201ENST00000439128 HTN3P15516 51 aa10.33□□□□□ -0.76
NEK1-201ENST00000439128 NBL1P41271 181 aa10.33□□□□□ -0.76
NEK1-201ENST00000439128 NANOS3P60323 173 aaKnown RBP10.33□□□□□ -0.76
NEK1-201ENST00000439128 IL24Q13007 206 aa10.33□□□□□ -0.76
NEK1-201ENST00000439128 CLEC18BQ6UXF7 455 aa10.33□□□□□ -0.76
NEK1-201ENST00000439128 OR5P3Q8WZ94 311 aa10.33□□□□□ -0.76
NEK1-201ENST00000439128 MARVELD3Q96A59 401 aa10.33□□□□□ -0.76
NEK1-201ENST00000439128 IGKV1D-42A0A075B6H8 117 aa10.33□□□□□ -0.76
NEK1-201ENST00000439128 KIAA1324LA8MWY0 1029 aaPredicted RBP10.33□□□□□ -0.76
NEK1-201ENST00000439128 EFEMP2O95967 443 aa10.33□□□□□ -0.76
NEK1-201ENST00000439128 PTGDSP41222 190 aa10.33□□□□□ -0.76
NEK1-201ENST00000439128 B2MP61769 119 aa10.33□□□□□ -0.76
NEK1-201ENST00000439128 SNRPD3P62318 126 aaKnown RBP10.33□□□□□ -0.76
NEK1-201ENST00000439128 KHDC3LQ587J8 217 aa10.33□□□□□ -0.76
NEK1-201ENST00000439128 C10orf128Q5T292 105 aa10.33□□□□□ -0.76
NEK1-201ENST00000439128 SLC25A28Q96A46 364 aa10.33□□□□□ -0.76
NEK1-201ENST00000439128 ISG15P05161 165 aa10.33□□□□□ -0.76
NEK1-201ENST00000439128 FCGR2BP31994 310 aaPredicted RBP10.33□□□□□ -0.76
NEK1-201ENST00000439128 TCTE3Q8IZS6 198 aa10.33□□□□□ -0.76
NEK1-201ENST00000439128 SLC7A5P1Q8MH63 180 aa10.33□□□□□ -0.76
NEK1-201ENST00000439128 ZDHHC11Q9H8X9 412 aa10.33□□□□□ -0.76
NEK1-201ENST00000439128 JPT1Q9UK76 154 aa10.33□□□□□ -0.76
NEK1-201ENST00000439128 TRAV40A0A0B4J280 105 aa10.33□□□□□ -0.76
NEK1-201ENST00000439128 CRYBA2P53672 197 aa10.33□□□□□ -0.76
NEK1-201ENST00000439128 TMEM50BP56557 158 aa10.33□□□□□ -0.76
NEK1-201ENST00000439128 FOXF2Q12947 444 aa10.33□□□□□ -0.76
NEK1-201ENST00000439128 C12orf54Q6X4T0 127 aa10.33□□□□□ -0.76
NEK1-201ENST00000439128 LMX1BO60663 402 aa10.33□□□□□ -0.76
NEK1-201ENST00000439128 RD3LP0DJH9 198 aa10.33□□□□□ -0.76
NEK1-201ENST00000439128 C1QTNF12Q5T7M4 302 aa10.33□□□□□ -0.76
NEK1-201ENST00000439128 SPANXN1Q5VSR9 72 aa10.33□□□□□ -0.76
NEK1-201ENST00000439128 MRPL37Q9BZE1 423 aaKnown RBP10.33□□□□□ -0.76
NEK1-201ENST00000439128 OR10Z1Q8NGY1 313 aa10.32□□□□□ -0.76
NEK1-201ENST00000439128 GPX7Q96SL4 187 aaPredicted RBP10.32□□□□□ -0.76
NEK1-201ENST00000439128 NPPCP23582 126 aa10.32□□□□□ -0.76
NEK1-201ENST00000439128 PRNTQ86SH4 94 aa10.32□□□□□ -0.76
NEK1-201ENST00000439128 A0A1W2PP11 408 aa10.32□□□□□ -0.76
NEK1-201ENST00000439128 RGS13O14921 159 aa10.32□□□□□ -0.76
NEK1-201ENST00000439128 OR2A4O95047 310 aa10.32□□□□□ -0.76
NEK1-201ENST00000439128 CST4P01036 141 aa10.32□□□□□ -0.76
NEK1-201ENST00000439128 COL8A1P27658 744 aa10.32□□□□□ -0.76
NEK1-201ENST00000439128 NUTF2P61970 127 aaKnown RBP10.32□□□□□ -0.76
NEK1-201ENST00000439128 RHOVQ96L33 236 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms