RNA–Protein interactions for RNA: ENST00000439008.1

LINC00399-201, long intergenic non-protein coding RNA 399, humanhuman

TSL 2 BASIC

Gene LINC00399, Length 414 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00399-201ENST00000439008 RNF150Q9ULK6 438 aa10.52□□□□□ -0.73
LINC00399-201ENST00000439008 METTL21EPA6NDL7 271 aa10.51□□□□□ -0.73
LINC00399-201ENST00000439008 TMEM235A6NFC5 223 aa10.51□□□□□ -0.73
LINC00399-201ENST00000439008 SERPINE3A8MV23 424 aa10.51□□□□□ -0.73
LINC00399-201ENST00000439008 PTHLHP12272 177 aa10.51□□□□□ -0.73
LINC00399-201ENST00000439008 IL3RAP26951 378 aa10.51□□□□□ -0.73
LINC00399-201ENST00000439008 CNTFRP26992 372 aa10.51□□□□□ -0.73
LINC00399-201ENST00000439008 VDAC2P45880 294 aaPredicted RBP10.51□□□□□ -0.73
LINC00399-201ENST00000439008 NCS1P62166 190 aa10.51□□□□□ -0.73
LINC00399-201ENST00000439008 OR2AK2Q8NG84 335 aa10.51□□□□□ -0.73
LINC00399-201ENST00000439008 CABLES2Q9BTV7 478 aa10.51□□□□□ -0.73
LINC00399-201ENST00000439008 NOTCH3Q9UM47 2321 aa10.5□□□□□ -0.73
LINC00399-201ENST00000439008 FABP7O15540 132 aa10.5□□□□□ -0.73
LINC00399-201ENST00000439008 RGS11O94810 467 aa10.5□□□□□ -0.73
LINC00399-201ENST00000439008 CT45A6P0DMU7 189 aa10.5□□□□□ -0.73
LINC00399-201ENST00000439008 CT45A5P0DMU8 189 aa10.5□□□□□ -0.73
LINC00399-201ENST00000439008 CT45A7P0DMV0 189 aa10.5□□□□□ -0.73
LINC00399-201ENST00000439008 RANBP1P43487 201 aa10.5□□□□□ -0.73
LINC00399-201ENST00000439008 VBP1P61758 197 aa10.5□□□□□ -0.73
LINC00399-201ENST00000439008 ARFRP1Q13795 201 aa10.5□□□□□ -0.73
LINC00399-201ENST00000439008 C9orf152Q5JTZ5 239 aa10.5□□□□□ -0.73
LINC00399-201ENST00000439008 TREML4Q6UXN2 200 aa10.5□□□□□ -0.73
LINC00399-201ENST00000439008 GLDNQ6ZMI3 551 aaPredicted RBP10.5□□□□□ -0.73
LINC00399-201ENST00000439008 DTX3Q8N9I9 347 aa10.5□□□□□ -0.73
LINC00399-201ENST00000439008 OR4A4PQ8NGN8 299 aa10.5□□□□□ -0.73
LINC00399-201ENST00000439008 OR2T10Q8NGZ9 312 aa10.5□□□□□ -0.73
LINC00399-201ENST00000439008 AKR1E2Q96JD6 320 aa10.5□□□□□ -0.73
LINC00399-201ENST00000439008 NOL4LQ96MY1 436 aaPredicted RBP10.5□□□□□ -0.73
LINC00399-201ENST00000439008 CITED2Q99967 270 aaPredicted RBP10.5□□□□□ -0.73
LINC00399-201ENST00000439008 TOLLIPQ9H0E2 274 aa10.5□□□□□ -0.73
LINC00399-201ENST00000439008 LINC00527Q9UJ94 153 aa10.5□□□□□ -0.73
LINC00399-201ENST00000439008 TRBV6-7A0A0A0MS04 114 aa10.49□□□□□ -0.73
LINC00399-201ENST00000439008 ITGB1BP1O14713 200 aa10.49□□□□□ -0.73
LINC00399-201ENST00000439008 BET1O15155 118 aa10.49□□□□□ -0.73
LINC00399-201ENST00000439008 FGF16O43320 207 aa10.49□□□□□ -0.73
LINC00399-201ENST00000439008 MOSP00540 346 aa10.49□□□□□ -0.73
LINC00399-201ENST00000439008 TFAP2AP05549 437 aa10.49□□□□□ -0.73
LINC00399-201ENST00000439008 ZBTB25P24278 435 aa10.49□□□□□ -0.73
LINC00399-201ENST00000439008 CTF1Q16619 201 aa10.49□□□□□ -0.73
LINC00399-201ENST00000439008 TIMM50Q3ZCQ8 353 aa10.49□□□□□ -0.73
LINC00399-201ENST00000439008 HACD4Q5VWC8 232 aa10.49□□□□□ -0.73
LINC00399-201ENST00000439008 Q6ZS49 121 aa10.49□□□□□ -0.73
LINC00399-201ENST00000439008 FAM71E2Q8N5Q1 922 aa10.49□□□□□ -0.73
LINC00399-201ENST00000439008 HSPB9Q9BQS6 159 aa10.49□□□□□ -0.73
LINC00399-201ENST00000439008 VCX3AQ9NNX9 186 aa10.49□□□□□ -0.73
LINC00399-201ENST00000439008 RDH8Q9NYR8 311 aa10.49□□□□□ -0.73
LINC00399-201ENST00000439008 MGAT4AQ9UM21 535 aa10.49□□□□□ -0.73
LINC00399-201ENST00000439008 TRAV18A0A075B6X5 111 aa10.48□□□□□ -0.73
LINC00399-201ENST00000439008 NCBP2LA6PVI3 153 aaKnown RBP10.48□□□□□ -0.73
LINC00399-201ENST00000439008 M0QZK8 103 aa10.48□□□□□ -0.73
LINC00399-201ENST00000439008 HSPA12AO43301 675 aa10.48□□□□□ -0.73
LINC00399-201ENST00000439008 TXNL1O43396 289 aa10.48□□□□□ -0.73
LINC00399-201ENST00000439008 FBXO24O75426 580 aa10.48□□□□□ -0.73
LINC00399-201ENST00000439008 IGHG2P01859 326 aa10.48□□□□□ -0.73
LINC00399-201ENST00000439008 ALDH3B2P48448 385 aa10.48□□□□□ -0.73
LINC00399-201ENST00000439008 SCAND1P57086 179 aa10.48□□□□□ -0.73
LINC00399-201ENST00000439008 CD83Q01151 205 aa10.48□□□□□ -0.73
LINC00399-201ENST00000439008 ARSJQ5FYB0 599 aaPredicted RBP10.48□□□□□ -0.73
LINC00399-201ENST00000439008 FAM131AQ6UXB0 335 aa10.48□□□□□ -0.73
LINC00399-201ENST00000439008 ZNF329Q86UD4 541 aa10.48□□□□□ -0.73
LINC00399-201ENST00000439008 DRAXINQ8NBI3 349 aaPredicted RBP10.48□□□□□ -0.73
LINC00399-201ENST00000439008 OR5AU1Q8NGC0 362 aa10.48□□□□□ -0.73
LINC00399-201ENST00000439008 S1PR3Q99500 378 aa10.48□□□□□ -0.73
LINC00399-201ENST00000439008 ST6GALNAC5Q9BVH7 336 aa10.48□□□□□ -0.73
LINC00399-201ENST00000439008 SPATA2Q9UM82 520 aa10.48□□□□□ -0.73
LINC00399-201ENST00000439008 ETV7Q9Y603 341 aa10.48□□□□□ -0.73
LINC00399-201ENST00000439008 M0QZ24 198 aa10.47□□□□□ -0.73
LINC00399-201ENST00000439008 RAB29O14966 203 aa10.47□□□□□ -0.73
LINC00399-201ENST00000439008 GSTP1P09211 210 aaKnown RBP10.47□□□□□ -0.73
LINC00399-201ENST00000439008 DTYMKP23919 212 aa10.47□□□□□ -0.73
LINC00399-201ENST00000439008 SERPINB10P48595 397 aa10.47□□□□□ -0.73
LINC00399-201ENST00000439008 SRSF7Q16629 238 aaKnown RBP eCLIP10.47□□□□□ -0.73
LINC00399-201ENST00000439008 NSUN5P1Q3KNT7 163 aa10.47□□□□□ -0.73
LINC00399-201ENST00000439008 ANKRD13BQ86YJ7 626 aa10.47□□□□□ -0.73
LINC00399-201ENST00000439008 GVQW1Q8N7I0 195 aa10.47□□□□□ -0.73
LINC00399-201ENST00000439008 ZNF383Q8NA42 475 aa10.47□□□□□ -0.73
LINC00399-201ENST00000439008 FAM110DQ8TAY7 271 aaPredicted RBP10.47□□□□□ -0.73
LINC00399-201ENST00000439008 SLC25A46Q96AG3 418 aa10.47□□□□□ -0.73
LINC00399-201ENST00000439008 ABCG5Q9H222 651 aa10.47□□□□□ -0.73
LINC00399-201ENST00000439008 PIPOXQ9P0Z9 390 aa10.47□□□□□ -0.73
LINC00399-201ENST00000439008 H0YJW9 148 aa10.46□□□□□ -0.73
LINC00399-201ENST00000439008 GABARAPO95166 117 aa10.46□□□□□ -0.73
LINC00399-201ENST00000439008 FCER2P06734 321 aa10.46□□□□□ -0.73
LINC00399-201ENST00000439008 OR8U9P0C7N5 309 aa10.46□□□□□ -0.73
LINC00399-201ENST00000439008 GPR12P47775 334 aa10.46□□□□□ -0.73
LINC00399-201ENST00000439008 ACTBP60709 375 aa10.46□□□□□ -0.73
LINC00399-201ENST00000439008 MRPS15P82914 257 aaKnown RBP10.46□□□□□ -0.73
LINC00399-201ENST00000439008 KIR2DS1Q14954 304 aa10.46□□□□□ -0.73
LINC00399-201ENST00000439008 GPR107Q5VW38 600 aa10.46□□□□□ -0.73
LINC00399-201ENST00000439008 FAM71F2Q6NXP2 309 aa10.46□□□□□ -0.73
LINC00399-201ENST00000439008 CENPVQ7Z7K6 275 aaPredicted RBP10.46□□□□□ -0.73
LINC00399-201ENST00000439008 H1FOOQ8IZA3 346 aaPredicted RBP10.46□□□□□ -0.73
LINC00399-201ENST00000439008 OR5AN1Q8NGI8 311 aa10.46□□□□□ -0.73
LINC00399-201ENST00000439008 OR8U1Q8NH10 309 aa10.46□□□□□ -0.73
LINC00399-201ENST00000439008 EDARADDQ8WWZ3 215 aa10.46□□□□□ -0.73
LINC00399-201ENST00000439008 AUNIPQ9H7T9 357 aa10.46□□□□□ -0.73
LINC00399-201ENST00000439008 LIN7CQ9NUP9 197 aaKnown RBP10.46□□□□□ -0.73
LINC00399-201ENST00000439008 ZNF107Q9UII5 783 aaPredicted RBP10.46□□□□□ -0.73
LINC00399-201ENST00000439008 EIF4EP06730 217 aaKnown RBP10.45□□□□□ -0.74
LINC00399-201ENST00000439008 TALDO1P37837 337 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms