RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 CHST6Q9GZX3 395 aa2.76□□□□□ -1.97
HMGB1P12-201ENST00000438594 DEFB127Q9H1M4 99 aa2.76□□□□□ -1.97
HMGB1P12-201ENST00000438594 EDA2RQ9HAV5 297 aa2.76□□□□□ -1.97
HMGB1P12-201ENST00000438594 NOX3Q9HBY0 568 aa2.76□□□□□ -1.97
HMGB1P12-201ENST00000438594 GPR84Q9NQS5 396 aa2.76□□□□□ -1.97
HMGB1P12-201ENST00000438594 TMEM38BQ9NVV0 291 aa2.76□□□□□ -1.97
HMGB1P12-201ENST00000438594 WASHC3Q9Y3C0 194 aa2.76□□□□□ -1.97
HMGB1P12-201ENST00000438594 UGT2A1Q9Y4X1 527 aa2.76□□□□□ -1.97
HMGB1P12-201ENST00000438594 MAGI3Q5TCQ9 1506 aa2.76□□□□□ -1.97
HMGB1P12-201ENST00000438594 EHBP1L1Q8N3D4 1523 aa2.76□□□□□ -1.97
HMGB1P12-201ENST00000438594 DENND4BO75064 1496 aaPredicted RBP2.76□□□□□ -1.97
HMGB1P12-201ENST00000438594 TCOF1Q13428 1488 aaKnown RBP2.76□□□□□ -1.97
HMGB1P12-201ENST00000438594 LRRC9Q6ZRR7 1453 aa2.76□□□□□ -1.97
HMGB1P12-201ENST00000438594 KIAA0556O60303 1618 aa2.75□□□□□ -1.97
HMGB1P12-201ENST00000438594 HECW1Q76N89 1606 aa2.75□□□□□ -1.97
HMGB1P12-201ENST00000438594 IQGAP2Q13576 1575 aa2.75□□□□□ -1.97
HMGB1P12-201ENST00000438594 IGHV4-4A0A075B6R2 117 aa2.75□□□□□ -1.97
HMGB1P12-201ENST00000438594 TRAV8-3A0A0A6YYJ7 113 aa2.75□□□□□ -1.97
HMGB1P12-201ENST00000438594 A0A0J9YY10 115 aa2.75□□□□□ -1.97
HMGB1P12-201ENST00000438594 A0A1B0GX78 115 aa2.75□□□□□ -1.97
HMGB1P12-201ENST00000438594 KNCNA6PVL3 124 aa2.75□□□□□ -1.97
HMGB1P12-201ENST00000438594 F6UZH7 168 aa2.75□□□□□ -1.97
HMGB1P12-201ENST00000438594 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.75□□□□□ -1.97
HMGB1P12-201ENST00000438594 UPK1AO00322 258 aa2.75□□□□□ -1.97
HMGB1P12-201ENST00000438594 UPK2O00526 184 aa2.75□□□□□ -1.97
HMGB1P12-201ENST00000438594 MRASO14807 208 aa2.75□□□□□ -1.97
HMGB1P12-201ENST00000438594 PSPHP1O15172 72 aa2.75□□□□□ -1.97
HMGB1P12-201ENST00000438594 GGCTO75223 188 aaKnown RBP2.75□□□□□ -1.97
HMGB1P12-201ENST00000438594 NDUFC2O95298 119 aa2.75□□□□□ -1.97
HMGB1P12-201ENST00000438594 CRYBA1P05813 215 aa2.75□□□□□ -1.97
HMGB1P12-201ENST00000438594 ZNF806P0C7X5 589 aa2.75□□□□□ -1.97
HMGB1P12-201ENST00000438594 LAMP1P11279 417 aa2.75□□□□□ -1.97
HMGB1P12-201ENST00000438594 RAB3BP20337 219 aa2.75□□□□□ -1.97
HMGB1P12-201ENST00000438594 GATA2P23769 480 aaPredicted RBP2.75□□□□□ -1.97
HMGB1P12-201ENST00000438594 IL2RGP31785 369 aa2.75□□□□□ -1.97
HMGB1P12-201ENST00000438594 SPRP35270 261 aaPredicted RBP2.75□□□□□ -1.97
HMGB1P12-201ENST00000438594 SRPXP78539 464 aa2.75□□□□□ -1.97
HMGB1P12-201ENST00000438594 IFITM3Q01628 133 aa2.75□□□□□ -1.97
HMGB1P12-201ENST00000438594 REG3AQ06141 175 aa2.75□□□□□ -1.97
HMGB1P12-201ENST00000438594 BIKQ13323 160 aa2.75□□□□□ -1.97
HMGB1P12-201ENST00000438594 BTN1A1Q13410 526 aa2.75□□□□□ -1.97
HMGB1P12-201ENST00000438594 KIAA0087Q14695 138 aa2.75□□□□□ -1.97
HMGB1P12-201ENST00000438594 SLC10A1Q14973 349 aa2.75□□□□□ -1.97
HMGB1P12-201ENST00000438594 PAFAH1B3Q15102 231 aaKnown RBP2.75□□□□□ -1.97
HMGB1P12-201ENST00000438594 FCN2Q15485 313 aa2.75□□□□□ -1.97
HMGB1P12-201ENST00000438594 CNPY1Q3B7I2 92 aa2.75□□□□□ -1.97
HMGB1P12-201ENST00000438594 KIAA1644Q3SXP7 199 aa2.75□□□□□ -1.97
HMGB1P12-201ENST00000438594 IBA57Q5T440 356 aaKnown RBP2.75□□□□□ -1.97
HMGB1P12-201ENST00000438594 ARL9Q6T311 187 aa2.75□□□□□ -1.97
HMGB1P12-201ENST00000438594 REG3GQ6UW15 175 aa2.75□□□□□ -1.97
HMGB1P12-201ENST00000438594 SBSNQ6UWP8 590 aa2.75□□□□□ -1.97
HMGB1P12-201ENST00000438594 DNM1P46Q6ZS02 220 aa2.75□□□□□ -1.97
HMGB1P12-201ENST00000438594 FAM19A3Q7Z5A8 133 aa2.75□□□□□ -1.97
HMGB1P12-201ENST00000438594 SGPP2Q8IWX5 399 aa2.75□□□□□ -1.97
HMGB1P12-201ENST00000438594 BAP18Q8IXM2 172 aa2.75□□□□□ -1.97
HMGB1P12-201ENST00000438594 TMEM86AQ8N2M4 240 aa2.75□□□□□ -1.97
HMGB1P12-201ENST00000438594 SLC25A45Q8N413 288 aa2.75□□□□□ -1.97
HMGB1P12-201ENST00000438594 ANKRD29Q8N6D5 301 aa2.75□□□□□ -1.97
HMGB1P12-201ENST00000438594 NKAPP1Q8N9T2 125 aa2.75□□□□□ -1.97
HMGB1P12-201ENST00000438594 DCAF4L2Q8NA75 395 aa2.75□□□□□ -1.97
HMGB1P12-201ENST00000438594 LY6G5BQ8NDX9 201 aa2.75□□□□□ -1.97
HMGB1P12-201ENST00000438594 OR13C8Q8NGS7 320 aa2.75□□□□□ -1.97
HMGB1P12-201ENST00000438594 GEMIN6Q8WXD5 167 aaKnown RBP2.75□□□□□ -1.97
HMGB1P12-201ENST00000438594 TAF15Q92804 592 aaKnown RBP eCLIP2.75□□□□□ -1.97
HMGB1P12-201ENST00000438594 GPR146Q96CH1 333 aa2.75□□□□□ -1.97
HMGB1P12-201ENST00000438594 SLC35E1Q96K37 410 aa2.75□□□□□ -1.97
HMGB1P12-201ENST00000438594 ZNF354BQ96LW1 612 aa2.75□□□□□ -1.97
HMGB1P12-201ENST00000438594 SIGLEC12Q96PQ1 595 aa2.75□□□□□ -1.97
HMGB1P12-201ENST00000438594 TSPAN32Q96QS1 320 aa2.75□□□□□ -1.97
HMGB1P12-201ENST00000438594 TP53RKQ96S44 253 aa2.75□□□□□ -1.97
HMGB1P12-201ENST00000438594 LINC01587Q99440 93 aa2.75□□□□□ -1.97
HMGB1P12-201ENST00000438594 ZNF649Q9BS31 505 aa2.75□□□□□ -1.97
HMGB1P12-201ENST00000438594 NDFIP1Q9BT67 221 aa2.75□□□□□ -1.97
HMGB1P12-201ENST00000438594 LPAR5Q9H1C0 372 aa2.75□□□□□ -1.97
HMGB1P12-201ENST00000438594 ZNF331Q9NQX6 463 aaPredicted RBP2.75□□□□□ -1.97
HMGB1P12-201ENST00000438594 ZNF71Q9NQZ8 489 aaPredicted RBP2.75□□□□□ -1.97
HMGB1P12-201ENST00000438594 SLC23A2Q9UGH3 650 aa2.75□□□□□ -1.97
HMGB1P12-201ENST00000438594 LAMTOR2Q9Y2Q5 125 aa2.75□□□□□ -1.97
HMGB1P12-201ENST00000438594 INSIG2Q9Y5U4 225 aa2.75□□□□□ -1.97
HMGB1P12-201ENST00000438594 VWA8A3KMH1 1905 aa2.75□□□□□ -1.97
HMGB1P12-201ENST00000438594 CROCC2H7BZ55 1655 aa2.75□□□□□ -1.97
HMGB1P12-201ENST00000438594 ZNF609O15014 1411 aa2.75□□□□□ -1.97
HMGB1P12-201ENST00000438594 NPHP4O75161 1426 aaPredicted RBP2.75□□□□□ -1.97
HMGB1P12-201ENST00000438594 TNS3Q68CZ2 1445 aa2.75□□□□□ -1.97
HMGB1P12-201ENST00000438594 MED23Q9ULK4 1368 aa2.74□□□□□ -1.97
HMGB1P12-201ENST00000438594 DISP1Q96F81 1524 aa2.74□□□□□ -1.97
HMGB1P12-201ENST00000438594 IGKV1-27A0A075B6S5 117 aa2.74□□□□□ -1.97
HMGB1P12-201ENST00000438594 IGHV6-1A0A0B4J1U7 121 aa2.74□□□□□ -1.97
HMGB1P12-201ENST00000438594 IGHV1-69DA0A0B4J2H0 117 aa2.74□□□□□ -1.97
HMGB1P12-201ENST00000438594 LOC389332A0A1B0GUA5 103 aa2.74□□□□□ -1.97
HMGB1P12-201ENST00000438594 LOC102725191A0A1B0GVB3 256 aa2.74□□□□□ -1.97
HMGB1P12-201ENST00000438594 EPOPA6NHQ4 379 aa2.74□□□□□ -1.97
HMGB1P12-201ENST00000438594 H3BSA7 217 aa2.74□□□□□ -1.97
HMGB1P12-201ENST00000438594 ISLRO14498 428 aa2.74□□□□□ -1.97
HMGB1P12-201ENST00000438594 SS18L1O75177 396 aaPredicted RBP2.74□□□□□ -1.97
HMGB1P12-201ENST00000438594 ZNF682O95780 498 aa2.74□□□□□ -1.97
HMGB1P12-201ENST00000438594 HLA-DRB1P01911 266 aa2.74□□□□□ -1.97
HMGB1P12-201ENST00000438594 CECR9P0C854 216 aa2.74□□□□□ -1.97
HMGB1P12-201ENST00000438594 GADD45AP24522 165 aa2.74□□□□□ -1.97
HMGB1P12-201ENST00000438594 G6PCP35575 357 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms