RNA–Protein interactions for RNA: ENST00000438518.5

HDAC6-208, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-208ENST00000438518 S1PR3Q99500 378 aa14.93□□□□□ -0.02
HDAC6-208ENST00000438518 PRRT1Q99946 306 aa14.93□□□□□ -0.02
HDAC6-208ENST00000438518 SLC2A8Q9NY64 477 aa14.93□□□□□ -0.02
HDAC6-208ENST00000438518 ZNF221Q9UK13 617 aa14.93□□□□□ -0.02
HDAC6-208ENST00000438518 FAM96BQ9Y3D0 163 aa14.93□□□□□ -0.02
HDAC6-208ENST00000438518 IGHV3OR16-10A0A075B7F0 116 aa14.92□□□□□ -0.02
HDAC6-208ENST00000438518 NAP1L6A6NFF2 107 aa14.92□□□□□ -0.02
HDAC6-208ENST00000438518 CENPXA8MT69 81 aa14.92□□□□□ -0.02
HDAC6-208ENST00000438518 INAFM1C9JVW0 142 aa14.92□□□□□ -0.02
HDAC6-208ENST00000438518 LY6LH3BQJ8 138 aa14.92□□□□□ -0.02
HDAC6-208ENST00000438518 SLC31A2O15432 143 aa14.92□□□□□ -0.02
HDAC6-208ENST00000438518 IGHV3-7P01780 117 aa14.92□□□□□ -0.02
HDAC6-208ENST00000438518 AMY2AP04746 511 aa14.92□□□□□ -0.02
HDAC6-208ENST00000438518 ZNF816Q0VGE8 651 aaPredicted RBP14.92□□□□□ -0.02
HDAC6-208ENST00000438518 UTF1Q5T230 341 aa14.92□□□□□ -0.02
HDAC6-208ENST00000438518 RUSC1-AS1Q66K80 236 aa14.92□□□□□ -0.02
HDAC6-208ENST00000438518 LPCAT3Q6P1A2 487 aa14.92□□□□□ -0.02
HDAC6-208ENST00000438518 OR4C16Q8NGL9 310 aa14.92□□□□□ -0.02
HDAC6-208ENST00000438518 ST6GALNAC6Q969X2 333 aa14.92□□□□□ -0.02
HDAC6-208ENST00000438518 RPEQ96AT9 228 aa14.92□□□□□ -0.02
HDAC6-208ENST00000438518 MOB3AQ96BX8 217 aa14.92□□□□□ -0.02
HDAC6-208ENST00000438518 ZNF2Q9BSG1 426 aaPredicted RBP14.92□□□□□ -0.02
HDAC6-208ENST00000438518 TINAGL1Q9GZM7 467 aaPredicted RBP14.92□□□□□ -0.02
HDAC6-208ENST00000438518 CSPG4Q6UVK1 2322 aa14.92□□□□□ -0.02
HDAC6-208ENST00000438518 A0A1W2PPE3 182 aa14.91□□□□□ -0.02
HDAC6-208ENST00000438518 M0QYG6 137 aa14.91□□□□□ -0.02
HDAC6-208ENST00000438518 ST8SIA5O15466 376 aa14.91□□□□□ -0.02
HDAC6-208ENST00000438518 CRLF1O75462 422 aa14.91□□□□□ -0.02
HDAC6-208ENST00000438518 GAPDHP04406 335 aaKnown RBP14.91□□□□□ -0.02
HDAC6-208ENST00000438518 OR8U9P0C7N5 309 aa14.91□□□□□ -0.02
HDAC6-208ENST00000438518 AADACP22760 399 aa14.91□□□□□ -0.02
HDAC6-208ENST00000438518 GPR12P47775 334 aa14.91□□□□□ -0.02
HDAC6-208ENST00000438518 AANATQ16613 207 aa14.91□□□□□ -0.02
HDAC6-208ENST00000438518 TUSC1Q2TAM9 212 aa14.91□□□□□ -0.02
HDAC6-208ENST00000438518 TPTE2P1Q5T6R2 138 aa14.91□□□□□ -0.02
HDAC6-208ENST00000438518 FAM53AQ6NSI3 398 aaPredicted RBP14.91□□□□□ -0.02
HDAC6-208ENST00000438518 ZNF833PQ6ZTB9 187 aa14.91□□□□□ -0.02
HDAC6-208ENST00000438518 IL17RELQ6ZVW7 336 aa14.91□□□□□ -0.02
HDAC6-208ENST00000438518 LHFPL1Q86WI0 220 aa14.91□□□□□ -0.02
HDAC6-208ENST00000438518 ODF3L1Q8IXM7 274 aa14.91□□□□□ -0.02
HDAC6-208ENST00000438518 OR8H3Q8N146 312 aa14.91□□□□□ -0.02
HDAC6-208ENST00000438518 ZNF645Q8N7E2 425 aa14.91□□□□□ -0.02
HDAC6-208ENST00000438518 OR8U1Q8NH10 309 aa14.91□□□□□ -0.02
HDAC6-208ENST00000438518 TOMM40LQ969M1 308 aa14.91□□□□□ -0.02
HDAC6-208ENST00000438518 MEGF9Q9H1U4 602 aa14.91□□□□□ -0.02
HDAC6-208ENST00000438518 OR2D2Q9H210 308 aa14.91□□□□□ -0.02
HDAC6-208ENST00000438518 PRDM13Q9H4Q3 707 aa14.91□□□□□ -0.02
HDAC6-208ENST00000438518 SCP2D1Q9UJQ7 156 aa14.91□□□□□ -0.02
HDAC6-208ENST00000438518 F8P00451 2351 aa14.91□□□□□ -0.02
HDAC6-208ENST00000438518 HIVEP2P31629 2446 aa14.9□□□□□ -0.02
HDAC6-208ENST00000438518 A0A1W2PRD5 423 aa14.9□□□□□ -0.02
HDAC6-208ENST00000438518 A0A1W2PRF3 423 aa14.9□□□□□ -0.02
HDAC6-208ENST00000438518 A0A1W2PRM7 423 aa14.9□□□□□ -0.02
HDAC6-208ENST00000438518 HSD17B6O14756 317 aa14.9□□□□□ -0.02
HDAC6-208ENST00000438518 UPK1BO75841 260 aa14.9□□□□□ -0.02
HDAC6-208ENST00000438518 FAM157CP0CG43 387 aa14.9□□□□□ -0.02
HDAC6-208ENST00000438518 UCP3P55916 312 aa14.9□□□□□ -0.02
HDAC6-208ENST00000438518 Q71RC1 249 aaPredicted RBP14.9□□□□□ -0.02
HDAC6-208ENST00000438518 LHFPL4Q7Z7J7 247 aa14.9□□□□□ -0.02
HDAC6-208ENST00000438518 TGIF2LXQ8IUE1 241 aa14.9□□□□□ -0.02
HDAC6-208ENST00000438518 ZBTB34Q8NCN2 500 aa14.9□□□□□ -0.02
HDAC6-208ENST00000438518 AKR1E2Q96JD6 320 aa14.9□□□□□ -0.02
HDAC6-208ENST00000438518 PARP12Q9H0J9 701 aaKnown RBP14.9□□□□□ -0.02
HDAC6-208ENST00000438518 HRASLSQ9HDD0 168 aa14.9□□□□□ -0.02
HDAC6-208ENST00000438518 ANK3Q12955 4377 aaKnown RBP14.9□□□□□ -0.02
HDAC6-208ENST00000438518 SAA2-SAA4A0A096LPE2 208 aa14.89□□□□□ -0.03
HDAC6-208ENST00000438518 A0A0U1RQK1 487 aa14.89□□□□□ -0.03
HDAC6-208ENST00000438518 ZNF735P0CB33 412 aa14.89□□□□□ -0.03
HDAC6-208ENST00000438518 SAA2P0DJI9 122 aaPredicted RBP14.89□□□□□ -0.03
HDAC6-208ENST00000438518 DYNLT3P51808 116 aa14.89□□□□□ -0.03
HDAC6-208ENST00000438518 SURF2Q15527 256 aaPredicted RBP14.89□□□□□ -0.03
HDAC6-208ENST00000438518 LDLRAD3Q86YD5 345 aa14.89□□□□□ -0.03
HDAC6-208ENST00000438518 OR4D10Q8NGI6 311 aa14.89□□□□□ -0.03
HDAC6-208ENST00000438518 TERB2Q8NHR7 220 aa14.89□□□□□ -0.03
HDAC6-208ENST00000438518 RTN4IP1Q8WWV3 396 aaPredicted RBP14.89□□□□□ -0.03
HDAC6-208ENST00000438518 ABHD14BQ96IU4 210 aa14.89□□□□□ -0.03
HDAC6-208ENST00000438518 SLC6A7Q99884 636 aa14.89□□□□□ -0.03
HDAC6-208ENST00000438518 SVEP1Q4LDE5 3571 aa14.89□□□□□ -0.03
HDAC6-208ENST00000438518 VGLL3A8MV65 326 aa14.88□□□□□ -0.03
HDAC6-208ENST00000438518 SSX2Q16385 188 aa14.88□□□□□ -0.03
HDAC6-208ENST00000438518 SLC38A6Q8IZM9 456 aa14.88□□□□□ -0.03
HDAC6-208ENST00000438518 OR56B4Q8NH76 319 aa14.88□□□□□ -0.03
HDAC6-208ENST00000438518 ZNF486Q96H40 463 aaPredicted RBP14.88□□□□□ -0.03
HDAC6-208ENST00000438518 AJUBAQ96IF1 538 aa14.88□□□□□ -0.03
HDAC6-208ENST00000438518 SCGB3A2Q96PL1 93 aa14.88□□□□□ -0.03
HDAC6-208ENST00000438518 ZNF251Q9BRH9 671 aa14.88□□□□□ -0.03
HDAC6-208ENST00000438518 MCUBQ9NWR8 336 aa14.88□□□□□ -0.03
HDAC6-208ENST00000438518 ZNRD1Q9P1U0 126 aa14.88□□□□□ -0.03
HDAC6-208ENST00000438518 IGKV1D-13A0A0B4J2D9 117 aa14.87□□□□□ -0.03
HDAC6-208ENST00000438518 J3QRK9 145 aa14.87□□□□□ -0.03
HDAC6-208ENST00000438518 IGKV1-13P0DP09 117 aa14.87□□□□□ -0.03
HDAC6-208ENST00000438518 S100GP29377 79 aa14.87□□□□□ -0.03
HDAC6-208ENST00000438518 BRS3P32247 399 aa14.87□□□□□ -0.03
HDAC6-208ENST00000438518 FXYD4P59646 89 aa14.87□□□□□ -0.03
HDAC6-208ENST00000438518 TAGLNQ01995 201 aaKnown RBP14.87□□□□□ -0.03
HDAC6-208ENST00000438518 HABP2Q14520 560 aaPredicted RBP14.87□□□□□ -0.03
HDAC6-208ENST00000438518 SCGB2B2Q4G0G5 96 aa14.87□□□□□ -0.03
HDAC6-208ENST00000438518 LDLRAD2Q5SZI1 272 aa14.87□□□□□ -0.03
HDAC6-208ENST00000438518 AADACL3Q5VUY0 350 aa14.87□□□□□ -0.03
HDAC6-208ENST00000438518 RBMS3Q6XE24 437 aaKnown RBP14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms