RNA–Protein interactions for RNA: ENST00000438224.5

HERPUD2-206, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-206ENST00000438224 TMEM272A0A1B0GTI8 110 aa6.77□□□□□ -1.33
HERPUD2-206ENST00000438224 TRDV1A0A1B0GX56 115 aa6.77□□□□□ -1.33
HERPUD2-206ENST00000438224 SMIM30A4D0T7 59 aa6.77□□□□□ -1.33
HERPUD2-206ENST00000438224 SPINT2O43291 252 aa6.77□□□□□ -1.33
HERPUD2-206ENST00000438224 CA11O75493 328 aa6.77□□□□□ -1.33
HERPUD2-206ENST00000438224 ARL6IP5O75915 188 aa6.77□□□□□ -1.33
HERPUD2-206ENST00000438224 IGKV1D-33P01593 117 aa6.77□□□□□ -1.33
HERPUD2-206ENST00000438224 IGKV1-33P01594 117 aa6.77□□□□□ -1.33
HERPUD2-206ENST00000438224 PSMA1P25786 263 aaKnown RBP6.77□□□□□ -1.33
HERPUD2-206ENST00000438224 PPP1CCP36873 323 aaKnown RBP6.77□□□□□ -1.33
HERPUD2-206ENST00000438224 MNDAP41218 407 aa6.77□□□□□ -1.33
HERPUD2-206ENST00000438224 VDAC2P45880 294 aaPredicted RBP6.77□□□□□ -1.33
HERPUD2-206ENST00000438224 RAB7AP51149 207 aa6.77□□□□□ -1.33
HERPUD2-206ENST00000438224 ZNF137PP52743 207 aa6.77□□□□□ -1.33
HERPUD2-206ENST00000438224 EBI3Q14213 229 aa6.77□□□□□ -1.33
HERPUD2-206ENST00000438224 HNF4GQ14541 408 aa6.77□□□□□ -1.33
HERPUD2-206ENST00000438224 RAB11BQ15907 218 aa6.77□□□□□ -1.33
HERPUD2-206ENST00000438224 PLAC9Q5JTB6 97 aa6.77□□□□□ -1.33
HERPUD2-206ENST00000438224 C6orf183Q5T699 404 aa6.77□□□□□ -1.33
HERPUD2-206ENST00000438224 CCDC144NLQ6NUI1 221 aa6.77□□□□□ -1.33
HERPUD2-206ENST00000438224 Q6ZTK2 550 aa6.77□□□□□ -1.33
HERPUD2-206ENST00000438224 OR2W3Q7Z3T1 314 aa6.77□□□□□ -1.33
HERPUD2-206ENST00000438224 ODF3L1Q8IXM7 274 aa6.77□□□□□ -1.33
HERPUD2-206ENST00000438224 Q8N6K4 173 aa6.77□□□□□ -1.33
HERPUD2-206ENST00000438224 RTN4IP1Q8WWV3 396 aaPredicted RBP6.77□□□□□ -1.33
HERPUD2-206ENST00000438224 FAM3DQ96BQ1 224 aa6.77□□□□□ -1.33
HERPUD2-206ENST00000438224 NEDD4LQ96PU5 975 aa6.77□□□□□ -1.33
HERPUD2-206ENST00000438224 CITED2Q99967 270 aaPredicted RBP6.77□□□□□ -1.33
HERPUD2-206ENST00000438224 GNG12Q9UBI6 72 aa6.77□□□□□ -1.33
HERPUD2-206ENST00000438224 SLC23A1Q9UHI7 598 aa6.77□□□□□ -1.33
HERPUD2-206ENST00000438224 AK3Q9UIJ7 227 aa6.77□□□□□ -1.33
HERPUD2-206ENST00000438224 HSF4Q9ULV5 492 aa6.77□□□□□ -1.33
HERPUD2-206ENST00000438224 MOB4Q9Y3A3 225 aa6.77□□□□□ -1.33
HERPUD2-206ENST00000438224 RRP15Q9Y3B9 282 aaKnown RBP6.77□□□□□ -1.33
HERPUD2-206ENST00000438224 V9GY05 133 aa6.77□□□□□ -1.33
HERPUD2-206ENST00000438224 TRAV1-2A0A0B4J238 106 aa6.76□□□□□ -1.33
HERPUD2-206ENST00000438224 LINC01548A6NM66 108 aa6.76□□□□□ -1.33
HERPUD2-206ENST00000438224 CCRL2O00421 344 aa6.76□□□□□ -1.33
HERPUD2-206ENST00000438224 MRPS14O60783 128 aaKnown RBP6.76□□□□□ -1.33
HERPUD2-206ENST00000438224 GAPDHP04406 335 aaKnown RBP6.76□□□□□ -1.33
HERPUD2-206ENST00000438224 ARSBP15848 533 aa6.76□□□□□ -1.33
HERPUD2-206ENST00000438224 PSMB9P28065 219 aa6.76□□□□□ -1.33
HERPUD2-206ENST00000438224 VEGFCP49767 419 aa6.76□□□□□ -1.33
HERPUD2-206ENST00000438224 ARHGDIBP52566 201 aa6.76□□□□□ -1.33
HERPUD2-206ENST00000438224 C2orf68Q2NKX9 166 aa6.76□□□□□ -1.33
HERPUD2-206ENST00000438224 C2orf76Q3KRA6 126 aa6.76□□□□□ -1.33
HERPUD2-206ENST00000438224 MOGAT2Q3SYC2 334 aa6.76□□□□□ -1.33
HERPUD2-206ENST00000438224 Q3ZCU0 254 aa6.76□□□□□ -1.33
HERPUD2-206ENST00000438224 MORN2Q502X0 79 aa6.76□□□□□ -1.33
HERPUD2-206ENST00000438224 C22orf42Q6IC83 251 aa6.76□□□□□ -1.33
HERPUD2-206ENST00000438224 MOB3BQ86TA1 216 aa6.76□□□□□ -1.33
HERPUD2-206ENST00000438224 IZUMO1Q8IYV9 350 aa6.76□□□□□ -1.33
HERPUD2-206ENST00000438224 C5orf56Q8N8D9 126 aa6.76□□□□□ -1.33
HERPUD2-206ENST00000438224 ARHGAP5-AS1Q96IT6 56 aa6.76□□□□□ -1.33
HERPUD2-206ENST00000438224 PECRQ9BY49 303 aa6.76□□□□□ -1.33
HERPUD2-206ENST00000438224 OR2S2Q9NQN1 319 aa6.76□□□□□ -1.33
HERPUD2-206ENST00000438224 PLSCR3Q9NRY6 295 aa6.76□□□□□ -1.33
HERPUD2-206ENST00000438224 SLC45A2Q9UMX9 530 aa6.76□□□□□ -1.33
HERPUD2-206ENST00000438224 KCNK7Q9Y2U2 307 aa6.76□□□□□ -1.33
HERPUD2-206ENST00000438224 TRBV6-6A0A0A6YYG2 114 aa6.75□□□□□ -1.33
HERPUD2-206ENST00000438224 LANCL1O43813 399 aa6.75□□□□□ -1.33
HERPUD2-206ENST00000438224 CLEC3BP05452 202 aa6.75□□□□□ -1.33
HERPUD2-206ENST00000438224 SLC2A2P11168 524 aaPredicted RBP6.75□□□□□ -1.33
HERPUD2-206ENST00000438224 TMEM11P17152 192 aa6.75□□□□□ -1.33
HERPUD2-206ENST00000438224 OR3A3P47888 321 aa6.75□□□□□ -1.33
HERPUD2-206ENST00000438224 RPP30P78346 268 aaKnown RBP6.75□□□□□ -1.33
HERPUD2-206ENST00000438224 HES1Q14469 280 aa6.75□□□□□ -1.33
HERPUD2-206ENST00000438224 NSUN5P1Q3KNT7 163 aa6.75□□□□□ -1.33
HERPUD2-206ENST00000438224 TMEM30BQ3MIR4 351 aa6.75□□□□□ -1.33
HERPUD2-206ENST00000438224 C9orf152Q5JTZ5 239 aa6.75□□□□□ -1.33
HERPUD2-206ENST00000438224 TRAT1Q6PIZ9 186 aa6.75□□□□□ -1.33
HERPUD2-206ENST00000438224 ZNF773Q6PK81 442 aa6.75□□□□□ -1.33
HERPUD2-206ENST00000438224 ZNF554Q86TJ5 538 aa6.75□□□□□ -1.33
HERPUD2-206ENST00000438224 C1QL4Q86Z23 238 aa6.75□□□□□ -1.33
HERPUD2-206ENST00000438224 Q8N9W7 124 aa6.75□□□□□ -1.33
HERPUD2-206ENST00000438224 AKR1E2Q96JD6 320 aa6.75□□□□□ -1.33
HERPUD2-206ENST00000438224 NOL4LQ96MY1 436 aaPredicted RBP6.75□□□□□ -1.33
HERPUD2-206ENST00000438224 YTHDF1Q9BYJ9 559 aaKnown RBP6.75□□□□□ -1.33
HERPUD2-206ENST00000438224 OR51E2Q9H255 320 aa6.75□□□□□ -1.33
HERPUD2-206ENST00000438224 SLC25A32Q9H2D1 315 aa6.75□□□□□ -1.33
HERPUD2-206ENST00000438224 IFI27L2Q9H2X8 130 aa6.75□□□□□ -1.33
HERPUD2-206ENST00000438224 RNF167Q9H6Y7 350 aa6.75□□□□□ -1.33
HERPUD2-206ENST00000438224 PLEKHJ1Q9NW61 149 aa6.75□□□□□ -1.33
HERPUD2-206ENST00000438224 TXNL4BQ9NX01 149 aaKnown RBP6.75□□□□□ -1.33
HERPUD2-206ENST00000438224 OR1A1Q9P1Q5 309 aa6.75□□□□□ -1.33
HERPUD2-206ENST00000438224 STEAP1Q9UHE8 339 aa6.75□□□□□ -1.33
HERPUD2-206ENST00000438224 LINC00527Q9UJ94 153 aa6.75□□□□□ -1.33
HERPUD2-206ENST00000438224 JPT1Q9UK76 154 aa6.75□□□□□ -1.33
HERPUD2-206ENST00000438224 LRRC42Q9Y546 428 aa6.75□□□□□ -1.33
HERPUD2-206ENST00000438224 SAA2-SAA4A0A096LPE2 208 aa6.74□□□□□ -1.33
HERPUD2-206ENST00000438224 IGKV1-6A0A0C4DH72 117 aa6.74□□□□□ -1.33
HERPUD2-206ENST00000438224 A0A1W2PRX2 142 aa6.74□□□□□ -1.33
HERPUD2-206ENST00000438224 IFITM5A6NNB3 132 aa6.74□□□□□ -1.33
HERPUD2-206ENST00000438224 FGF16O43320 207 aa6.74□□□□□ -1.33
HERPUD2-206ENST00000438224 RRP9O43818 475 aaKnown RBP6.74□□□□□ -1.33
HERPUD2-206ENST00000438224 YPEL1O60688 119 aa6.74□□□□□ -1.33
HERPUD2-206ENST00000438224 SCTP09683 121 aa6.74□□□□□ -1.33
HERPUD2-206ENST00000438224 FAM106CPP0CH98 169 aa6.74□□□□□ -1.33
HERPUD2-206ENST00000438224 SAA2P0DJI9 122 aaPredicted RBP6.74□□□□□ -1.33
HERPUD2-206ENST00000438224 RAB3BP20337 219 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms