RNA–Protein interactions for RNA: ENST00000438023.5

KDM4C-206, Transcript of lysine demethylase 4C, humanhuman

TSL 5

Gene KDM4C, Length 4,022 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4C-206ENST00000438023 TIMP4Q99727 224 aa11.68□□□□□ -0.54
KDM4C-206ENST00000438023 POLR3KQ9Y2Y1 108 aaPredicted RBP11.68□□□□□ -0.54
KDM4C-206ENST00000438023 BTF3P20290 206 aaKnown RBP11.68□□□□□ -0.54
KDM4C-206ENST00000438023 UBE2L3P68036 154 aaKnown RBP11.68□□□□□ -0.54
KDM4C-206ENST00000438023 ROM1Q03395 351 aa11.68□□□□□ -0.54
KDM4C-206ENST00000438023 KIAA0895LQ68EN5 471 aa11.68□□□□□ -0.54
KDM4C-206ENST00000438023 ZDHHC23Q8IYP9 409 aa11.68□□□□□ -0.54
KDM4C-206ENST00000438023 SH2D2AQ9NP31 389 aa11.68□□□□□ -0.54
KDM4C-206ENST00000438023 HLA-DRB1P01911 266 aa11.67□□□□□ -0.54
KDM4C-206ENST00000438023 GALNSP34059 522 aa11.67□□□□□ -0.54
KDM4C-206ENST00000438023 FOXA3P55318 350 aaPredicted RBP11.67□□□□□ -0.54
KDM4C-206ENST00000438023 GALMQ96C23 342 aa11.67□□□□□ -0.54
KDM4C-206ENST00000438023 MVB12AQ96EY5 273 aa11.67□□□□□ -0.54
KDM4C-206ENST00000438023 TMEM14DPA8MWL7 114 aa11.67□□□□□ -0.54
KDM4C-206ENST00000438023 FCGR3BO75015 233 aa11.67□□□□□ -0.54
KDM4C-206ENST00000438023 F2RP25116 425 aa11.67□□□□□ -0.54
KDM4C-206ENST00000438023 C16orf47Q6ZP98 133 aaPredicted RBP11.67□□□□□ -0.54
KDM4C-206ENST00000438023 ORAOV1Q8WV07 137 aa11.67□□□□□ -0.54
KDM4C-206ENST00000438023 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.67□□□□□ -0.54
KDM4C-206ENST00000438023 VSTM2LQ96N03 204 aa11.67□□□□□ -0.54
KDM4C-206ENST00000438023 TMEM70Q9BUB7 260 aa11.67□□□□□ -0.54
KDM4C-206ENST00000438023 PTPRDP23468 1912 aa11.67□□□□□ -0.54
KDM4C-206ENST00000438023 FREM3P0C091 2139 aa11.67□□□□□ -0.54
KDM4C-206ENST00000438023 LOC107984156A0A0G2JMH3 177 aa11.67□□□□□ -0.54
KDM4C-206ENST00000438023 A0A1W2PPV9 198 aa11.67□□□□□ -0.54
KDM4C-206ENST00000438023 HNRNPA1P09651 372 aaKnown RBP eCLIP11.67□□□□□ -0.54
KDM4C-206ENST00000438023 NPY1RP25929 384 aa11.67□□□□□ -0.54
KDM4C-206ENST00000438023 RPL13AP40429 203 aaKnown RBP11.67□□□□□ -0.54
KDM4C-206ENST00000438023 FOXK1P85037 733 aa11.67□□□□□ -0.54
KDM4C-206ENST00000438023 OCIAD2Q56VL3 154 aa11.67□□□□□ -0.54
KDM4C-206ENST00000438023 IBA57Q5T440 356 aaKnown RBP11.67□□□□□ -0.54
KDM4C-206ENST00000438023 ARL17AQ8IVW1 177 aa11.67□□□□□ -0.54
KDM4C-206ENST00000438023 KCNS1Q96KK3 526 aa11.67□□□□□ -0.54
KDM4C-206ENST00000438023 S1PR3Q99500 378 aa11.67□□□□□ -0.54
KDM4C-206ENST00000438023 NUDT16L1Q9BRJ7 211 aaKnown RBP11.67□□□□□ -0.54
KDM4C-206ENST00000438023 HILPDAQ9Y5L2 63 aa11.67□□□□□ -0.54
KDM4C-206ENST00000438023 H0YIG0 161 aa11.66□□□□□ -0.54
KDM4C-206ENST00000438023 CXorf1O96002 111 aa11.66□□□□□ -0.54
KDM4C-206ENST00000438023 TSPAN7P41732 249 aa11.66□□□□□ -0.54
KDM4C-206ENST00000438023 ZNF841Q6ZN19 808 aa11.66□□□□□ -0.54
KDM4C-206ENST00000438023 PQLC2Q6ZP29 291 aa11.66□□□□□ -0.54
KDM4C-206ENST00000438023 TMEM52Q8NDY8 209 aa11.66□□□□□ -0.54
KDM4C-206ENST00000438023 DEFB108AA8MXU0 73 aa11.66□□□□□ -0.54
KDM4C-206ENST00000438023 PRR32B1ATL7 298 aa11.66□□□□□ -0.54
KDM4C-206ENST00000438023 SH2D1BO14796 132 aa11.66□□□□□ -0.54
KDM4C-206ENST00000438023 CA1P00915 261 aaPredicted RBP11.66□□□□□ -0.54
KDM4C-206ENST00000438023 CEACAM8P31997 349 aaPredicted RBP11.66□□□□□ -0.54
KDM4C-206ENST00000438023 CST9LQ9H4G1 147 aa11.66□□□□□ -0.54
KDM4C-206ENST00000438023 GAGE12BA1L429 117 aa11.66□□□□□ -0.54
KDM4C-206ENST00000438023 FRG2CA6NGY1 282 aa11.66□□□□□ -0.54
KDM4C-206ENST00000438023 VENTXO95231 258 aa11.66□□□□□ -0.54
KDM4C-206ENST00000438023 GDF1P27539 372 aa11.66□□□□□ -0.54
KDM4C-206ENST00000438023 OR51G1Q8NGK1 321 aa11.66□□□□□ -0.54
KDM4C-206ENST00000438023 OR1L4Q8NGR5 311 aa11.66□□□□□ -0.54
KDM4C-206ENST00000438023 TMEM186Q96B77 213 aa11.66□□□□□ -0.54
KDM4C-206ENST00000438023 GPR146Q96CH1 333 aa11.66□□□□□ -0.54
KDM4C-206ENST00000438023 TMEM167BQ9NRX6 74 aa11.66□□□□□ -0.54
KDM4C-206ENST00000438023 FGF21Q9NSA1 209 aa11.66□□□□□ -0.54
KDM4C-206ENST00000438023 PGPEP1LA6NFU8 196 aa11.65□□□□□ -0.54
KDM4C-206ENST00000438023 IGKV1D-16P01601 117 aa11.65□□□□□ -0.54
KDM4C-206ENST00000438023 ZNF324BQ6AW86 544 aaPredicted RBP11.65□□□□□ -0.54
KDM4C-206ENST00000438023 TAAR6Q96RI8 345 aa11.65□□□□□ -0.54
KDM4C-206ENST00000438023 SSBP3Q9BWW4 388 aaPredicted RBP11.65□□□□□ -0.54
KDM4C-206ENST00000438023 B4GALT7Q9UBV7 327 aa11.65□□□□□ -0.54
KDM4C-206ENST00000438023 SHANK1Q9Y566 2161 aa11.65□□□□□ -0.54
KDM4C-206ENST00000438023 APC2O95996 2303 aa11.65□□□□□ -0.54
KDM4C-206ENST00000438023 ODAMA1E959 279 aa11.65□□□□□ -0.54
KDM4C-206ENST00000438023 C1QTNF9P0C862 333 aa11.65□□□□□ -0.54
KDM4C-206ENST00000438023 LINC00869P0C866 280 aa11.65□□□□□ -0.54
KDM4C-206ENST00000438023 NPBWR2P48146 333 aa11.65□□□□□ -0.54
KDM4C-206ENST00000438023 ACSF3Q4G176 576 aaPredicted RBP11.65□□□□□ -0.54
KDM4C-206ENST00000438023 MESP1Q9BRJ9 268 aa11.65□□□□□ -0.54
KDM4C-206ENST00000438023 EGLN1Q9GZT9 426 aa11.65□□□□□ -0.54
KDM4C-206ENST00000438023 TAAR3PQ9P1P4 343 aa11.65□□□□□ -0.54
KDM4C-206ENST00000438023 TNS1Q9HBL0 1735 aaKnown RBP11.65□□□□□ -0.54
KDM4C-206ENST00000438023 A0A1B0GUS0 222 aa11.65□□□□□ -0.54
KDM4C-206ENST00000438023 C1QTNF9BB2RNN3 333 aa11.65□□□□□ -0.54
KDM4C-206ENST00000438023 ASAH2BP0C7U1 165 aa11.65□□□□□ -0.54
KDM4C-206ENST00000438023 STAG3L2P0CL84 134 aa11.65□□□□□ -0.54
KDM4C-206ENST00000438023 GAGE1Q13065 139 aa11.65□□□□□ -0.54
KDM4C-206ENST00000438023 TTC32Q5I0X7 151 aa11.65□□□□□ -0.54
KDM4C-206ENST00000438023 OR1F12Q8NHA8 337 aa11.65□□□□□ -0.54
KDM4C-206ENST00000438023 PMCHL2Q9BQD1 86 aa11.65□□□□□ -0.54
KDM4C-206ENST00000438023 TDRD15B5MCY1 1934 aaKnown RBP11.65□□□□□ -0.55
KDM4C-206ENST00000438023 DOPEY2Q9Y3R5 2298 aa11.65□□□□□ -0.55
KDM4C-206ENST00000438023 DOCK6Q96HP0 2047 aa11.65□□□□□ -0.55
KDM4C-206ENST00000438023 TRAV30A0A087WSZ9 112 aa11.64□□□□□ -0.55
KDM4C-206ENST00000438023 ENSAO43768 121 aaKnown RBP11.64□□□□□ -0.55
KDM4C-206ENST00000438023 ISG15P05161 165 aa11.64□□□□□ -0.55
KDM4C-206ENST00000438023 C10orf91Q5T1B1 145 aa11.64□□□□□ -0.55
KDM4C-206ENST00000438023 OR10W1Q8NGF6 305 aa11.64□□□□□ -0.55
KDM4C-206ENST00000438023 OR2K2Q8NGT1 345 aa11.64□□□□□ -0.55
KDM4C-206ENST00000438023 RNASE8Q8TDE3 154 aaKnown RBP11.64□□□□□ -0.55
KDM4C-206ENST00000438023 MENTQ9BUN1 341 aa11.64□□□□□ -0.55
KDM4C-206ENST00000438023 RAB9BQ9NP90 201 aa11.64□□□□□ -0.55
KDM4C-206ENST00000438023 HEATR5AQ86XA9 2040 aa11.64□□□□□ -0.55
KDM4C-206ENST00000438023 NKX6-3A6NJ46 265 aa11.64□□□□□ -0.55
KDM4C-206ENST00000438023 CNIH1O95406 144 aa11.64□□□□□ -0.55
KDM4C-206ENST00000438023 IGHV3-13P01766 116 aa11.64□□□□□ -0.55
KDM4C-206ENST00000438023 IGHV3-7P01780 117 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms