RNA–Protein interactions for RNA: ENST00000435986.1

HMGB1P45-201, Transcript of high mobility group box 1 pseudogene 45, humanhuman

BASIC

Gene HMGB1P45, Length 653 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P45-201ENST00000435986 F8W036 122 aa2.88□□□□□ -1.95
HMGB1P45-201ENST00000435986 K7EPK0 472 aa2.88□□□□□ -1.95
HMGB1P45-201ENST00000435986 M0QYV0 167 aa2.88□□□□□ -1.95
HMGB1P45-201ENST00000435986 COPEO14579 308 aa2.88□□□□□ -1.95
HMGB1P45-201ENST00000435986 PSPHP1O15172 72 aa2.88□□□□□ -1.95
HMGB1P45-201ENST00000435986 RBFOX2O43251 390 aaKnown RBP eCLIP2.88□□□□□ -1.95
HMGB1P45-201ENST00000435986 SULT1C4O75897 302 aa2.88□□□□□ -1.95
HMGB1P45-201ENST00000435986 IGKV2D-28P01615 120 aa2.88□□□□□ -1.95
HMGB1P45-201ENST00000435986 TRBV12-3P01733 135 aa2.88□□□□□ -1.95
HMGB1P45-201ENST00000435986 HLA-DQA1P01909 254 aa2.88□□□□□ -1.95
HMGB1P45-201ENST00000435986 ATP5G1P05496 136 aa2.88□□□□□ -1.95
HMGB1P45-201ENST00000435986 OGNP20774 298 aaKnown RBP2.88□□□□□ -1.95
HMGB1P45-201ENST00000435986 ERP29P30040 261 aaKnown RBP2.88□□□□□ -1.95
HMGB1P45-201ENST00000435986 APLNRP35414 380 aa2.88□□□□□ -1.95
HMGB1P45-201ENST00000435986 AKR1C3P42330 323 aa2.88□□□□□ -1.95
HMGB1P45-201ENST00000435986 DAD1P61803 113 aa2.88□□□□□ -1.95
HMGB1P45-201ENST00000435986 CRADDP78560 199 aa2.88□□□□□ -1.95
HMGB1P45-201ENST00000435986 CDK5Q00535 292 aa2.88□□□□□ -1.95
HMGB1P45-201ENST00000435986 LOXL1Q08397 574 aaPredicted RBP2.88□□□□□ -1.95
HMGB1P45-201ENST00000435986 PRDX4Q13162 271 aa2.88□□□□□ -1.95
HMGB1P45-201ENST00000435986 PNOCQ13519 176 aa2.88□□□□□ -1.95
HMGB1P45-201ENST00000435986 PAFAH1B3Q15102 231 aaKnown RBP2.88□□□□□ -1.95
HMGB1P45-201ENST00000435986 IAH1Q2TAA2 248 aaPredicted RBP2.88□□□□□ -1.95
HMGB1P45-201ENST00000435986 SMIM21Q3B7S5 101 aa2.88□□□□□ -1.95
HMGB1P45-201ENST00000435986 Q499Y3 187 aa2.88□□□□□ -1.95
HMGB1P45-201ENST00000435986 ATP6AP1LQ52LC2 224 aa2.88□□□□□ -1.95
HMGB1P45-201ENST00000435986 AKR1C8PQ5T2L2 129 aa2.88□□□□□ -1.95
HMGB1P45-201ENST00000435986 TMEM78Q5T7P6 136 aa2.88□□□□□ -1.95
HMGB1P45-201ENST00000435986 KDM4DQ6B0I6 523 aa2.88□□□□□ -1.95
HMGB1P45-201ENST00000435986 TOMM20LQ6UXN7 152 aa2.88□□□□□ -1.95
HMGB1P45-201ENST00000435986 TMPPEQ6ZT21 453 aa2.88□□□□□ -1.95
HMGB1P45-201ENST00000435986 ZNF550Q7Z398 422 aa2.88□□□□□ -1.95
HMGB1P45-201ENST00000435986 OOSP2Q86WS3 158 aa2.88□□□□□ -1.95
HMGB1P45-201ENST00000435986 ANGPTL5Q86XS5 388 aa2.88□□□□□ -1.95
HMGB1P45-201ENST00000435986 ZCCHC24Q8N2G6 241 aaKnown RBP2.88□□□□□ -1.95
HMGB1P45-201ENST00000435986 LRRC18Q8N456 261 aa2.88□□□□□ -1.95
HMGB1P45-201ENST00000435986 ST6GALNAC3Q8NDV1 305 aa2.88□□□□□ -1.95
HMGB1P45-201ENST00000435986 OR10G2Q8NGC3 310 aa2.88□□□□□ -1.95
HMGB1P45-201ENST00000435986 OR4M1Q8NGD0 313 aa2.88□□□□□ -1.95
HMGB1P45-201ENST00000435986 OR8J3Q8NGG0 315 aa2.88□□□□□ -1.95
HMGB1P45-201ENST00000435986 OR1J4Q8NGS1 313 aa2.88□□□□□ -1.95
HMGB1P45-201ENST00000435986 RXFP4Q8TDU9 374 aa2.88□□□□□ -1.95
HMGB1P45-201ENST00000435986 CCL17Q92583 94 aa2.88□□□□□ -1.95
HMGB1P45-201ENST00000435986 PYURFQ96I23 114 aa2.88□□□□□ -1.95
HMGB1P45-201ENST00000435986 SLC35G5Q96KT7 338 aa2.88□□□□□ -1.95
HMGB1P45-201ENST00000435986 LINC00477Q96M19 166 aa2.88□□□□□ -1.95
HMGB1P45-201ENST00000435986 PPP1R2P1Q96PQ5 205 aa2.88□□□□□ -1.95
HMGB1P45-201ENST00000435986 SPACA5Q96QH8 159 aa2.88□□□□□ -1.95
HMGB1P45-201ENST00000435986 MS4A8Q9BY19 250 aa2.88□□□□□ -1.95
HMGB1P45-201ENST00000435986 CCDC90BQ9GZT6 254 aa2.88□□□□□ -1.95
HMGB1P45-201ENST00000435986 FAM96AQ9H5X1 160 aa2.88□□□□□ -1.95
HMGB1P45-201ENST00000435986 LRTM1Q9HBL6 345 aa2.88□□□□□ -1.95
HMGB1P45-201ENST00000435986 WFDC1Q9HC57 220 aa2.88□□□□□ -1.95
HMGB1P45-201ENST00000435986 RBFOX1Q9NWB1 397 aaKnown RBP2.88□□□□□ -1.95
HMGB1P45-201ENST00000435986 HDGFL3Q9Y3E1 203 aa2.88□□□□□ -1.95
HMGB1P45-201ENST00000435986 ASB4Q9Y574 426 aa2.88□□□□□ -1.95
HMGB1P45-201ENST00000435986 BRCA1P38398 1863 aaKnown RBP2.88□□□□□ -1.95
HMGB1P45-201ENST00000435986 BICRAQ9NZM4 1560 aa2.87□□□□□ -1.95
HMGB1P45-201ENST00000435986 YTHDC2Q9H6S0 1430 aaKnown RBP2.87□□□□□ -1.95
HMGB1P45-201ENST00000435986 TMEM150BA6NC51 233 aa2.87□□□□□ -1.95
HMGB1P45-201ENST00000435986 ZNF705GA8MUZ8 300 aaPredicted RBP2.87□□□□□ -1.95
HMGB1P45-201ENST00000435986 G3V2T6 193 aa2.87□□□□□ -1.95
HMGB1P45-201ENST00000435986 HMGB3O15347 200 aaKnown RBP2.87□□□□□ -1.95
HMGB1P45-201ENST00000435986 MFSD11O43934 449 aa2.87□□□□□ -1.95
HMGB1P45-201ENST00000435986 CCDC22O60826 627 aa2.87□□□□□ -1.95
HMGB1P45-201ENST00000435986 CA2P00918 260 aa2.87□□□□□ -1.95
HMGB1P45-201ENST00000435986 PDYNP01213 254 aa2.87□□□□□ -1.95
HMGB1P45-201ENST00000435986 IGKV3-11P04433 115 aa2.87□□□□□ -1.95
HMGB1P45-201ENST00000435986 PFN1P07737 140 aaKnown RBP2.87□□□□□ -1.95
HMGB1P45-201ENST00000435986 SDC4P31431 198 aa2.87□□□□□ -1.95
HMGB1P45-201ENST00000435986 RUNX1Q01196 453 aa2.87□□□□□ -1.95
HMGB1P45-201ENST00000435986 RBMY1FQ15415 496 aaKnown RBP2.87□□□□□ -1.95
HMGB1P45-201ENST00000435986 C6orf99Q4VX62 202 aa2.87□□□□□ -1.95
HMGB1P45-201ENST00000435986 CENPWQ5EE01 88 aa2.87□□□□□ -1.95
HMGB1P45-201ENST00000435986 FAM201AQ5SY85 155 aa2.87□□□□□ -1.95
HMGB1P45-201ENST00000435986 LPCAT3Q6P1A2 487 aa2.87□□□□□ -1.95
HMGB1P45-201ENST00000435986 ALKAL1Q6UXT8 129 aa2.87□□□□□ -1.95
HMGB1P45-201ENST00000435986 IDO2Q6ZQW0 420 aa2.87□□□□□ -1.95
HMGB1P45-201ENST00000435986 Q6ZR03 302 aa2.87□□□□□ -1.95
HMGB1P45-201ENST00000435986 OR4K5Q8NGD3 323 aa2.87□□□□□ -1.95
HMGB1P45-201ENST00000435986 OR52L1Q8NGH7 329 aa2.87□□□□□ -1.95
HMGB1P45-201ENST00000435986 GNPDA2Q8TDQ7 276 aa2.87□□□□□ -1.95
HMGB1P45-201ENST00000435986 DNAJC9Q8WXX5 260 aa2.87□□□□□ -1.95
HMGB1P45-201ENST00000435986 FAM104AQ969W3 186 aa2.87□□□□□ -1.95
HMGB1P45-201ENST00000435986 OR4K3Q96R72 315 aa2.87□□□□□ -1.95
HMGB1P45-201ENST00000435986 OR52B2Q96RD2 323 aa2.87□□□□□ -1.95
HMGB1P45-201ENST00000435986 KLF6Q99612 283 aaPredicted RBP2.87□□□□□ -1.95
HMGB1P45-201ENST00000435986 PRSS27Q9BQR3 290 aa2.87□□□□□ -1.95
HMGB1P45-201ENST00000435986 RSPO3Q9BXY4 272 aaPredicted RBP2.87□□□□□ -1.95
HMGB1P45-201ENST00000435986 GNB1LQ9BYB4 327 aa2.87□□□□□ -1.95
HMGB1P45-201ENST00000435986 TPT1P8Q9HAU6 139 aa2.87□□□□□ -1.95
HMGB1P45-201ENST00000435986 C14orf105Q9NVL8 296 aa2.87□□□□□ -1.95
HMGB1P45-201ENST00000435986 RASL12Q9NYN1 266 aa2.87□□□□□ -1.95
HMGB1P45-201ENST00000435986 MRPL27Q9P0M9 148 aaKnown RBP2.87□□□□□ -1.95
HMGB1P45-201ENST00000435986 RSL24D1Q9UHA3 163 aaKnown RBP2.87□□□□□ -1.95
HMGB1P45-201ENST00000435986 ENPP4Q9Y6X5 453 aa2.87□□□□□ -1.95
HMGB1P45-201ENST00000435986 CEP152O94986 1710 aa2.87□□□□□ -1.95
HMGB1P45-201ENST00000435986 MYO10Q9HD67 2058 aa2.86□□□□□ -1.95
HMGB1P45-201ENST00000435986 PTPRTO14522 1441 aa2.86□□□□□ -1.95
HMGB1P45-201ENST00000435986 SOGA1O94964 1423 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms