RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 KIR2DS4P43632 304 aa8.83□□□□□ -1
CLSTN1-203ENST00000435891 ERVFRD-1P60508 538 aa8.83□□□□□ -1
CLSTN1-203ENST00000435891 ERVS71-1P61550 626 aa8.83□□□□□ -1
CLSTN1-203ENST00000435891 SRPXP78539 464 aa8.83□□□□□ -1
CLSTN1-203ENST00000435891 PMS2P11Q13670 270 aa8.83□□□□□ -1
CLSTN1-203ENST00000435891 KIR2DS1Q14954 304 aa8.83□□□□□ -1
CLSTN1-203ENST00000435891 MDP1Q86V88 176 aa8.83□□□□□ -1
CLSTN1-203ENST00000435891 C1QL4Q86Z23 238 aa8.83□□□□□ -1
CLSTN1-203ENST00000435891 HIST1H2AAQ96QV6 131 aa8.83□□□□□ -1
CLSTN1-203ENST00000435891 NIPSNAP3BQ9BS92 247 aa8.83□□□□□ -1
CLSTN1-203ENST00000435891 PLEKHF2Q9H8W4 249 aa8.83□□□□□ -1
CLSTN1-203ENST00000435891 MKRN2OSH3BPM6 223 aa8.83□□□□□ -1
CLSTN1-203ENST00000435891 PITX3O75364 302 aa8.83□□□□□ -1
CLSTN1-203ENST00000435891 IGLV2-14P01704 120 aa8.83□□□□□ -1
CLSTN1-203ENST00000435891 PSG2P11465 335 aa8.83□□□□□ -1
CLSTN1-203ENST00000435891 CLN3Q13286 438 aa8.83□□□□□ -1
CLSTN1-203ENST00000435891 JOSD1Q15040 202 aaPredicted RBP8.83□□□□□ -1
CLSTN1-203ENST00000435891 ALKBH6Q3KRA9 238 aa8.83□□□□□ -1
CLSTN1-203ENST00000435891 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.83□□□□□ -1
CLSTN1-203ENST00000435891 C1orf87Q8N0U7 546 aa8.83□□□□□ -1
CLSTN1-203ENST00000435891 FAM58AQ8N1B3 248 aa8.83□□□□□ -1
CLSTN1-203ENST00000435891 MUCL1Q96DR8 90 aa8.83□□□□□ -1
CLSTN1-203ENST00000435891 F2RP25116 425 aa8.83□□□□□ -1
CLSTN1-203ENST00000435891 ARR3P36575 388 aa8.83□□□□□ -1
CLSTN1-203ENST00000435891 TDGF1P3P51864 188 aa8.83□□□□□ -1
CLSTN1-203ENST00000435891 PTTG1IPP53801 180 aa8.83□□□□□ -1
CLSTN1-203ENST00000435891 PLP2Q04941 152 aa8.83□□□□□ -1
CLSTN1-203ENST00000435891 SRSF7Q16629 238 aaKnown RBP eCLIP8.83□□□□□ -1
CLSTN1-203ENST00000435891 DHRS13Q6UX07 377 aa8.83□□□□□ -1
CLSTN1-203ENST00000435891 ZNF429Q86V71 674 aa8.83□□□□□ -1
CLSTN1-203ENST00000435891 C11orf42Q8N5U0 333 aa8.83□□□□□ -1
CLSTN1-203ENST00000435891 DEFB123Q8N688 67 aa8.83□□□□□ -1
CLSTN1-203ENST00000435891 NECAP1Q8NC96 275 aa8.83□□□□□ -1
CLSTN1-203ENST00000435891 R3HDM4Q96D70 268 aa8.83□□□□□ -1
CLSTN1-203ENST00000435891 DNAJC4Q9NNZ3 241 aa8.83□□□□□ -1
CLSTN1-203ENST00000435891 STRAPQ9Y3F4 350 aaKnown RBP8.83□□□□□ -1
CLSTN1-203ENST00000435891 CLEC18AA5D8T8 446 aa8.82□□□□□ -1
CLSTN1-203ENST00000435891 ANKRD30BLA7E2S9 258 aa8.82□□□□□ -1
CLSTN1-203ENST00000435891 WISP2O76076 250 aa8.82□□□□□ -1
CLSTN1-203ENST00000435891 IGKV1-39P01597 117 aa8.82□□□□□ -1
CLSTN1-203ENST00000435891 IGKV1D-39P04432 117 aa8.82□□□□□ -1
CLSTN1-203ENST00000435891 SP1P08047 785 aa8.82□□□□□ -1
CLSTN1-203ENST00000435891 OR4A8P0C604 315 aa8.82□□□□□ -1
CLSTN1-203ENST00000435891 CD59P13987 128 aa8.82□□□□□ -1
CLSTN1-203ENST00000435891 CLEC18CQ8NCF0 446 aa8.82□□□□□ -1
CLSTN1-203ENST00000435891 GPR146Q96CH1 333 aa8.82□□□□□ -1
CLSTN1-203ENST00000435891 PCNX2A6NKB5 2137 aa8.82□□□□□ -1
CLSTN1-203ENST00000435891 PLA2G5P39877 138 aa8.82□□□□□ -1
CLSTN1-203ENST00000435891 GNG3P63215 75 aa8.82□□□□□ -1
CLSTN1-203ENST00000435891 ZNF266Q14584 549 aa8.82□□□□□ -1
CLSTN1-203ENST00000435891 ELOBQ15370 118 aa8.82□□□□□ -1
CLSTN1-203ENST00000435891 AARDQ4LEZ3 155 aa8.82□□□□□ -1
CLSTN1-203ENST00000435891 ZNF880Q6PDB4 577 aa8.82□□□□□ -1
CLSTN1-203ENST00000435891 MCEMP1Q8IX19 187 aa8.82□□□□□ -1
CLSTN1-203ENST00000435891 CMTM1Q8IZ96 169 aa8.82□□□□□ -1
CLSTN1-203ENST00000435891 IL22RA1Q8N6P7 574 aa8.82□□□□□ -1
CLSTN1-203ENST00000435891 BEND2Q8NDZ0 799 aa8.82□□□□□ -1
CLSTN1-203ENST00000435891 OR5R1Q8NH85 324 aa8.82□□□□□ -1
CLSTN1-203ENST00000435891 TMEM37Q8WXS4 190 aa8.82□□□□□ -1
CLSTN1-203ENST00000435891 DIRC2Q96SL1 478 aa8.82□□□□□ -1
CLSTN1-203ENST00000435891 SPIN2AQ99865 258 aa8.82□□□□□ -1
CLSTN1-203ENST00000435891 SPIN2BQ9BPZ2 258 aa8.82□□□□□ -1
CLSTN1-203ENST00000435891 OR51I2Q9H344 312 aa8.82□□□□□ -1
CLSTN1-203ENST00000435891 SPRR3Q9UBC9 169 aa8.82□□□□□ -1
CLSTN1-203ENST00000435891 OR2W1Q9Y3N9 320 aa8.82□□□□□ -1
CLSTN1-203ENST00000435891 LOC102724200A0A096LPH7 203 aaPredicted RBP8.82□□□□□ -1
CLSTN1-203ENST00000435891 XKRY2A2RUG3 117 aa8.82□□□□□ -1
CLSTN1-203ENST00000435891 KIAA1324LA8MWY0 1029 aaPredicted RBP8.82□□□□□ -1
CLSTN1-203ENST00000435891 H0Y980 276 aa8.82□□□□□ -1
CLSTN1-203ENST00000435891 TLE4Q04727 773 aa8.82□□□□□ -1
CLSTN1-203ENST00000435891 FAM53AQ6NSI3 398 aaPredicted RBP8.82□□□□□ -1
CLSTN1-203ENST00000435891 TMPRSS7Q7RTY8 843 aa8.82□□□□□ -1
CLSTN1-203ENST00000435891 OR5D13Q8NGL4 314 aa8.82□□□□□ -1
CLSTN1-203ENST00000435891 OR1K1Q8NGR3 316 aa8.82□□□□□ -1
CLSTN1-203ENST00000435891 SIRPB1O00241 398 aa8.81□□□□□ -1
CLSTN1-203ENST00000435891 CDX4O14627 284 aaPredicted RBP8.81□□□□□ -1
CLSTN1-203ENST00000435891 CD82P27701 267 aa8.81□□□□□ -1
CLSTN1-203ENST00000435891 HLA-DRB3P79483 266 aa8.81□□□□□ -1
CLSTN1-203ENST00000435891 TMEM267Q0VDI3 215 aaPredicted RBP8.81□□□□□ -1
CLSTN1-203ENST00000435891 Q6P435 159 aa8.81□□□□□ -1
CLSTN1-203ENST00000435891 H1FOOQ8IZA3 346 aaPredicted RBP8.81□□□□□ -1
CLSTN1-203ENST00000435891 ABHD5Q8WTS1 349 aa8.81□□□□□ -1
CLSTN1-203ENST00000435891 CABLES2Q9BTV7 478 aa8.81□□□□□ -1
CLSTN1-203ENST00000435891 GP6Q9HCN6 339 aa8.81□□□□□ -1
CLSTN1-203ENST00000435891 PITPNC1Q9UKF7 332 aa8.81□□□□□ -1
CLSTN1-203ENST00000435891 USF3Q68DE3 2245 aa8.81□□□□□ -1
CLSTN1-203ENST00000435891 C20orf202A1L168 122 aa8.81□□□□□ -1
CLSTN1-203ENST00000435891 PMP22Q01453 160 aa8.81□□□□□ -1
CLSTN1-203ENST00000435891 ZNF573Q86YE8 665 aa8.81□□□□□ -1
CLSTN1-203ENST00000435891 MDS2Q8NDY4 140 aa8.81□□□□□ -1
CLSTN1-203ENST00000435891 BCL2L2Q92843 193 aaPredicted RBP8.81□□□□□ -1
CLSTN1-203ENST00000435891 RNF24Q9Y225 148 aa8.81□□□□□ -1
CLSTN1-203ENST00000435891 METTL15P1P0C7V9 234 aa8.81□□□□□ -1
CLSTN1-203ENST00000435891 IL24Q13007 206 aa8.81□□□□□ -1
CLSTN1-203ENST00000435891 TESK1Q15569 626 aa8.81□□□□□ -1
CLSTN1-203ENST00000435891 OR2J1Q9GZK6 312 aa8.81□□□□□ -1
CLSTN1-203ENST00000435891 ABI3Q9P2A4 366 aa8.81□□□□□ -1
CLSTN1-203ENST00000435891 PPP1R3CQ9UQK1 317 aa8.81□□□□□ -1
CLSTN1-203ENST00000435891 PRSS47A8MTI9 375 aa8.8□□□□□ -1
CLSTN1-203ENST00000435891 C21orf140B9A014 251 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms