RNA–Protein interactions for RNA: ENST00000435823.1

COL28A1-203, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL28A1, Length 678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-203ENST00000435823 SERTAD4Q9NUC0 356 aa9.14□□□□□ -0.95
COL28A1-203ENST00000435823 OR1A1Q9P1Q5 309 aa9.14□□□□□ -0.95
COL28A1-203ENST00000435823 SAA2-SAA4A0A096LPE2 208 aa9.13□□□□□ -0.95
COL28A1-203ENST00000435823 A0A0A6YYH2 397 aa9.13□□□□□ -0.95
COL28A1-203ENST00000435823 TMEM235A6NFC5 223 aa9.13□□□□□ -0.95
COL28A1-203ENST00000435823 A6NJ64 397 aa9.13□□□□□ -0.95
COL28A1-203ENST00000435823 M0QZ24 198 aa9.13□□□□□ -0.95
COL28A1-203ENST00000435823 BET1O15155 118 aa9.13□□□□□ -0.95
COL28A1-203ENST00000435823 FGF16O43320 207 aa9.13□□□□□ -0.95
COL28A1-203ENST00000435823 DIRAS3O95661 229 aa9.13□□□□□ -0.95
COL28A1-203ENST00000435823 MOSP00540 346 aa9.13□□□□□ -0.95
COL28A1-203ENST00000435823 GSTT2P0CG29 244 aa9.13□□□□□ -0.95
COL28A1-203ENST00000435823 GSTT2BP0CG30 244 aa9.13□□□□□ -0.95
COL28A1-203ENST00000435823 SAA2P0DJI9 122 aaPredicted RBP9.13□□□□□ -0.95
COL28A1-203ENST00000435823 KRTAP10-3P60369 221 aa9.13□□□□□ -0.95
COL28A1-203ENST00000435823 NCS1P62166 190 aa9.13□□□□□ -0.95
COL28A1-203ENST00000435823 LSAMPQ13449 338 aa9.13□□□□□ -0.95
COL28A1-203ENST00000435823 EBI3Q14213 229 aa9.13□□□□□ -0.95
COL28A1-203ENST00000435823 FBLN7Q53RD9 439 aa9.13□□□□□ -0.95
COL28A1-203ENST00000435823 C9orf152Q5JTZ5 239 aa9.13□□□□□ -0.95
COL28A1-203ENST00000435823 ZNF833PQ6ZTB9 187 aa9.13□□□□□ -0.95
COL28A1-203ENST00000435823 ODF3L1Q8IXM7 274 aa9.13□□□□□ -0.95
COL28A1-203ENST00000435823 OR8H1Q8NGG4 311 aa9.13□□□□□ -0.95
COL28A1-203ENST00000435823 OR10J5Q8NHC4 309 aa9.13□□□□□ -0.95
COL28A1-203ENST00000435823 SLC25A38Q96DW6 304 aa9.13□□□□□ -0.95
COL28A1-203ENST00000435823 DCSTAMPQ9H295 470 aa9.13□□□□□ -0.95
COL28A1-203ENST00000435823 IFI27L2Q9H2X8 130 aa9.13□□□□□ -0.95
COL28A1-203ENST00000435823 RDH8Q9NYR8 311 aa9.13□□□□□ -0.95
COL28A1-203ENST00000435823 ZNF230Q9UIE0 474 aaPredicted RBP9.13□□□□□ -0.95
COL28A1-203ENST00000435823 TRAV18A0A075B6X5 111 aa9.12□□□□□ -0.95
COL28A1-203ENST00000435823 IGKV1-6A0A0C4DH72 117 aa9.12□□□□□ -0.95
COL28A1-203ENST00000435823 NCBP2LA6PVI3 153 aaKnown RBP9.12□□□□□ -0.95
COL28A1-203ENST00000435823 OR3A3P47888 321 aa9.12□□□□□ -0.95
COL28A1-203ENST00000435823 VBP1P61758 197 aa9.12□□□□□ -0.95
COL28A1-203ENST00000435823 TMEM95Q3KNT9 176 aa9.12□□□□□ -0.95
COL28A1-203ENST00000435823 ZNF260Q3ZCT1 412 aa9.12□□□□□ -0.95
COL28A1-203ENST00000435823 Q6ZS49 121 aa9.12□□□□□ -0.95
COL28A1-203ENST00000435823 GPR141Q7Z602 305 aa9.12□□□□□ -0.95
COL28A1-203ENST00000435823 ANKRD13BQ86YJ7 626 aa9.12□□□□□ -0.95
COL28A1-203ENST00000435823 C5orf56Q8N8D9 126 aa9.12□□□□□ -0.95
COL28A1-203ENST00000435823 MAFIPQ8WZ33 124 aa9.12□□□□□ -0.95
COL28A1-203ENST00000435823 SLC25A46Q96AG3 418 aa9.12□□□□□ -0.95
COL28A1-203ENST00000435823 GINS4Q9BRT9 223 aa9.12□□□□□ -0.95
COL28A1-203ENST00000435823 CABLES2Q9BTV7 478 aa9.12□□□□□ -0.95
COL28A1-203ENST00000435823 ST6GALNAC5Q9BVH7 336 aa9.12□□□□□ -0.95
COL28A1-203ENST00000435823 MRPL20Q9BYC9 149 aaKnown RBP9.12□□□□□ -0.95
COL28A1-203ENST00000435823 PARP12Q9H0J9 701 aaKnown RBP9.12□□□□□ -0.95
COL28A1-203ENST00000435823 C11orf54Q9H0W9 315 aaPredicted RBP9.12□□□□□ -0.95
COL28A1-203ENST00000435823 ZNF221Q9UK13 617 aa9.12□□□□□ -0.95
COL28A1-203ENST00000435823 ELF5Q9UKW6 265 aaPredicted RBP9.12□□□□□ -0.95
COL28A1-203ENST00000435823 TRBV6-7A0A0A0MS04 114 aa9.11□□□□□ -0.95
COL28A1-203ENST00000435823 SH2D7A6NKC9 451 aaPredicted RBP9.11□□□□□ -0.95
COL28A1-203ENST00000435823 ZNF736B4DX44 427 aaPredicted RBP9.11□□□□□ -0.95
COL28A1-203ENST00000435823 FBXO24O75426 580 aa9.11□□□□□ -0.95
COL28A1-203ENST00000435823 GABARAPO95166 117 aa9.11□□□□□ -0.95
COL28A1-203ENST00000435823 AMY1AP04745 511 aa9.11□□□□□ -0.95
COL28A1-203ENST00000435823 AMY2AP04746 511 aa9.11□□□□□ -0.95
COL28A1-203ENST00000435823 CTXN2P0C2S0 81 aa9.11□□□□□ -0.95
COL28A1-203ENST00000435823 GPR12P47775 334 aa9.11□□□□□ -0.95
COL28A1-203ENST00000435823 RPL39P5Q59GN2 51 aa9.11□□□□□ -0.95
COL28A1-203ENST00000435823 IGSF11Q5DX21 431 aa9.11□□□□□ -0.95
COL28A1-203ENST00000435823 UBE2NLQ5JXB2 153 aa9.11□□□□□ -0.95
COL28A1-203ENST00000435823 PRR31Q5SQ13 230 aa9.11□□□□□ -0.95
COL28A1-203ENST00000435823 GPR107Q5VW38 600 aa9.11□□□□□ -0.95
COL28A1-203ENST00000435823 Q6ZS46 218 aa9.11□□□□□ -0.95
COL28A1-203ENST00000435823 Q8N6K4 173 aa9.11□□□□□ -0.95
COL28A1-203ENST00000435823 NUDCD2Q8WVJ2 157 aa9.11□□□□□ -0.95
COL28A1-203ENST00000435823 S100A16Q96FQ6 103 aaKnown RBP9.11□□□□□ -0.95
COL28A1-203ENST00000435823 ABHD14BQ96IU4 210 aa9.11□□□□□ -0.95
COL28A1-203ENST00000435823 NABP2Q9BQ15 211 aa9.11□□□□□ -0.95
COL28A1-203ENST00000435823 AGMATQ9BSE5 352 aa9.11□□□□□ -0.95
COL28A1-203ENST00000435823 WNT10AQ9GZT5 417 aa9.11□□□□□ -0.95
COL28A1-203ENST00000435823 TOLLIPQ9H0E2 274 aa9.11□□□□□ -0.95
COL28A1-203ENST00000435823 ABCG5Q9H222 651 aa9.11□□□□□ -0.95
COL28A1-203ENST00000435823 RBM7Q9Y580 266 aaKnown RBP9.11□□□□□ -0.95
COL28A1-203ENST00000435823 ALDH3B2P48448 385 aa9.1□□□□□ -0.95
COL28A1-203ENST00000435823 RORCP51449 518 aa9.1□□□□□ -0.95
COL28A1-203ENST00000435823 C2orf68Q2NKX9 166 aa9.1□□□□□ -0.95
COL28A1-203ENST00000435823 XP32Q5T750 250 aa9.1□□□□□ -0.95
COL28A1-203ENST00000435823 CENPVQ7Z7K6 275 aaPredicted RBP9.1□□□□□ -0.95
COL28A1-203ENST00000435823 SAMD12Q8N8I0 201 aa9.1□□□□□ -0.95
COL28A1-203ENST00000435823 C11orf44Q8N8P7 122 aa9.1□□□□□ -0.95
COL28A1-203ENST00000435823 ACOT12Q8WYK0 555 aa9.1□□□□□ -0.95
COL28A1-203ENST00000435823 RASL11BQ9BPW5 248 aa9.1□□□□□ -0.95
COL28A1-203ENST00000435823 ZNF251Q9BRH9 671 aa9.1□□□□□ -0.95
COL28A1-203ENST00000435823 LIN7CQ9NUP9 197 aaKnown RBP9.1□□□□□ -0.95
COL28A1-203ENST00000435823 RNF150Q9ULK6 438 aa9.1□□□□□ -0.95
COL28A1-203ENST00000435823 IGKV1D-8A0A087WSZ0 117 aa9.09□□□□□ -0.95
COL28A1-203ENST00000435823 OR5H14A6NHG9 310 aa9.09□□□□□ -0.95
COL28A1-203ENST00000435823 XRCC3O43542 346 aa9.09□□□□□ -0.95
COL28A1-203ENST00000435823 SSX5O60225 188 aa9.09□□□□□ -0.95
COL28A1-203ENST00000435823 TFAP2AP05549 437 aa9.09□□□□□ -0.95
COL28A1-203ENST00000435823 OR8U9P0C7N5 309 aa9.09□□□□□ -0.95
COL28A1-203ENST00000435823 CT45A6P0DMU7 189 aa9.09□□□□□ -0.95
COL28A1-203ENST00000435823 CT45A5P0DMU8 189 aa9.09□□□□□ -0.95
COL28A1-203ENST00000435823 CT45A7P0DMV0 189 aa9.09□□□□□ -0.95
COL28A1-203ENST00000435823 MC5RP33032 325 aa9.09□□□□□ -0.95
COL28A1-203ENST00000435823 CBX5P45973 191 aa9.09□□□□□ -0.95
COL28A1-203ENST00000435823 ACTBP60709 375 aa9.09□□□□□ -0.95
COL28A1-203ENST00000435823 MMDQ15546 238 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms