RNA–Protein interactions for RNA: ENST00000435354.1

LINC01006-204, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

TSL 2 BASIC

Gene LINC01006, Length 545 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-204ENST00000435354 NKX1-2Q9UD57 310 aaPredicted RBP11.17□□□□□ -0.62
LINC01006-204ENST00000435354 FBXO7Q9Y3I1 522 aa11.17□□□□□ -0.62
LINC01006-204ENST00000435354 LSM4Q9Y4Z0 139 aaKnown RBP11.17□□□□□ -0.62
LINC01006-204ENST00000435354 SORL1Q92673 2214 aa11.16□□□□□ -0.62
LINC01006-204ENST00000435354 TRAV41A0A0B4J266 112 aa11.16□□□□□ -0.62
LINC01006-204ENST00000435354 ANKRD65E5RJM6 399 aa11.16□□□□□ -0.62
LINC01006-204ENST00000435354 SOCS1O15524 211 aa11.16□□□□□ -0.62
LINC01006-204ENST00000435354 BPNT1O95861 308 aa11.16□□□□□ -0.62
LINC01006-204ENST00000435354 GNB1P62873 340 aa11.16□□□□□ -0.62
LINC01006-204ENST00000435354 RUNX1Q01196 453 aa11.16□□□□□ -0.62
LINC01006-204ENST00000435354 P2RY14Q15391 338 aa11.16□□□□□ -0.62
LINC01006-204ENST00000435354 MED22Q15528 200 aa11.16□□□□□ -0.62
LINC01006-204ENST00000435354 LIPKQ5VXJ0 399 aa11.16□□□□□ -0.62
LINC01006-204ENST00000435354 LIN54Q6MZP7 749 aa11.16□□□□□ -0.62
LINC01006-204ENST00000435354 FAM71F2Q6NXP2 309 aa11.16□□□□□ -0.62
LINC01006-204ENST00000435354 TMEM65Q6PI78 240 aa11.16□□□□□ -0.62
LINC01006-204ENST00000435354 TMEM91Q6ZNR0 172 aa11.16□□□□□ -0.62
LINC01006-204ENST00000435354 MINDY2Q8NBR6 621 aa11.16□□□□□ -0.62
LINC01006-204ENST00000435354 OR6M1Q8NGM8 313 aa11.16□□□□□ -0.62
LINC01006-204ENST00000435354 TMEM203Q969S6 136 aa11.16□□□□□ -0.62
LINC01006-204ENST00000435354 OR5B12Q96R08 314 aa11.16□□□□□ -0.62
LINC01006-204ENST00000435354 AGMATQ9BSE5 352 aa11.16□□□□□ -0.62
LINC01006-204ENST00000435354 LPAR5Q9H1C0 372 aa11.16□□□□□ -0.62
LINC01006-204ENST00000435354 VCXQ9H320 206 aa11.16□□□□□ -0.62
LINC01006-204ENST00000435354 CHMP1AQ9HD42 196 aaPredicted RBP11.16□□□□□ -0.62
LINC01006-204ENST00000435354 STEAP1Q9UHE8 339 aa11.16□□□□□ -0.62
LINC01006-204ENST00000435354 SLC23A1Q9UHI7 598 aa11.16□□□□□ -0.62
LINC01006-204ENST00000435354 TRBV6-6A0A0A6YYG2 114 aa11.15□□□□□ -0.62
LINC01006-204ENST00000435354 FOXI3A8MTJ6 420 aaPredicted RBP11.15□□□□□ -0.62
LINC01006-204ENST00000435354 H0YJW9 148 aa11.15□□□□□ -0.62
LINC01006-204ENST00000435354 RAB29O14966 203 aa11.15□□□□□ -0.62
LINC01006-204ENST00000435354 SOX15O60248 233 aa11.15□□□□□ -0.62
LINC01006-204ENST00000435354 CT45A6P0DMU7 189 aa11.15□□□□□ -0.62
LINC01006-204ENST00000435354 CT45A5P0DMU8 189 aa11.15□□□□□ -0.62
LINC01006-204ENST00000435354 CT45A7P0DMV0 189 aa11.15□□□□□ -0.62
LINC01006-204ENST00000435354 ECI1P42126 302 aa11.15□□□□□ -0.62
LINC01006-204ENST00000435354 ZNF260Q3ZCT1 412 aa11.15□□□□□ -0.62
LINC01006-204ENST00000435354 GLDNQ6ZMI3 551 aaPredicted RBP11.15□□□□□ -0.62
LINC01006-204ENST00000435354 MOB1BQ7L9L4 216 aa11.15□□□□□ -0.62
LINC01006-204ENST00000435354 FAM89BQ8N5H3 189 aa11.15□□□□□ -0.62
LINC01006-204ENST00000435354 OR1N2Q8NGR9 330 aa11.15□□□□□ -0.62
LINC01006-204ENST00000435354 SETD6Q8TBK2 473 aa11.15□□□□□ -0.62
LINC01006-204ENST00000435354 ABHD14BQ96IU4 210 aa11.15□□□□□ -0.62
LINC01006-204ENST00000435354 FBXL15Q9H469 300 aa11.15□□□□□ -0.62
LINC01006-204ENST00000435354 PLEKHJ1Q9NW61 149 aa11.15□□□□□ -0.62
LINC01006-204ENST00000435354 PIPOXQ9P0Z9 390 aa11.15□□□□□ -0.62
LINC01006-204ENST00000435354 OR1A1Q9P1Q5 309 aa11.15□□□□□ -0.62
LINC01006-204ENST00000435354 AK3Q9UIJ7 227 aa11.15□□□□□ -0.62
LINC01006-204ENST00000435354 VSIG4Q9Y279 399 aa11.15□□□□□ -0.62
LINC01006-204ENST00000435354 SLC17A2O00624 439 aa11.14□□□□□ -0.63
LINC01006-204ENST00000435354 RRHO14718 337 aa11.14□□□□□ -0.63
LINC01006-204ENST00000435354 OR8U8P0C7N1 319 aa11.14□□□□□ -0.63
LINC01006-204ENST00000435354 EGR2P11161 476 aaPredicted RBP11.14□□□□□ -0.63
LINC01006-204ENST00000435354 SNRPBP14678 240 aaKnown RBP11.14□□□□□ -0.63
LINC01006-204ENST00000435354 RAB9AP51151 201 aa11.14□□□□□ -0.63
LINC01006-204ENST00000435354 CRIP2P52943 208 aaPredicted RBP11.14□□□□□ -0.63
LINC01006-204ENST00000435354 AQP4P55087 323 aa11.14□□□□□ -0.63
LINC01006-204ENST00000435354 RPS25P62851 125 aaKnown RBP11.14□□□□□ -0.63
LINC01006-204ENST00000435354 CX3CL1P78423 397 aa11.14□□□□□ -0.63
LINC01006-204ENST00000435354 ZNF616Q08AN1 781 aa11.14□□□□□ -0.63
LINC01006-204ENST00000435354 TPBGQ13641 420 aa11.14□□□□□ -0.63
LINC01006-204ENST00000435354 NRG4Q8WWG1 115 aa11.14□□□□□ -0.63
LINC01006-204ENST00000435354 UFD1Q92890 307 aa11.14□□□□□ -0.63
LINC01006-204ENST00000435354 WWC2-AS2Q96NR7 200 aa11.14□□□□□ -0.63
LINC01006-204ENST00000435354 DUSP21Q9H596 190 aa11.14□□□□□ -0.63
LINC01006-204ENST00000435354 SCN3BQ9NY72 215 aa11.14□□□□□ -0.63
LINC01006-204ENST00000435354 KIAA1456Q9P272 454 aa11.14□□□□□ -0.63
LINC01006-204ENST00000435354 OR5H14A6NHG9 310 aa11.13□□□□□ -0.63
LINC01006-204ENST00000435354 FCN1O00602 326 aa11.13□□□□□ -0.63
LINC01006-204ENST00000435354 ITGB1BP1O14713 200 aa11.13□□□□□ -0.63
LINC01006-204ENST00000435354 PROP1O75360 226 aa11.13□□□□□ -0.63
LINC01006-204ENST00000435354 TMEM50BP56557 158 aa11.13□□□□□ -0.63
LINC01006-204ENST00000435354 ECSCRQ19T08 205 aa11.13□□□□□ -0.63
LINC01006-204ENST00000435354 ZNF660Q6AZW8 331 aaPredicted RBP11.13□□□□□ -0.63
LINC01006-204ENST00000435354 OR5AN1Q8NGI8 311 aa11.13□□□□□ -0.63
LINC01006-204ENST00000435354 CASTOR1Q8WTX7 329 aa11.13□□□□□ -0.63
LINC01006-204ENST00000435354 C11orf54Q9H0W9 315 aaPredicted RBP11.13□□□□□ -0.63
LINC01006-204ENST00000435354 ALX4Q9H161 411 aaPredicted RBP11.13□□□□□ -0.63
LINC01006-204ENST00000435354 RIMS4Q9H426 269 aaPredicted RBP11.13□□□□□ -0.63
LINC01006-204ENST00000435354 Q9N2K0 584 aa11.13□□□□□ -0.63
LINC01006-204ENST00000435354 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.13□□□□□ -0.63
LINC01006-204ENST00000435354 GAB2Q9UQC2 676 aa11.13□□□□□ -0.63
LINC01006-204ENST00000435354 STAB2Q8WWQ8 2551 aa11.12□□□□□ -0.63
LINC01006-204ENST00000435354 IGKV1-6A0A0C4DH72 117 aa11.12□□□□□ -0.63
LINC01006-204ENST00000435354 A0A1W2PN81 502 aa11.12□□□□□ -0.63
LINC01006-204ENST00000435354 SCTP09683 121 aa11.12□□□□□ -0.63
LINC01006-204ENST00000435354 ARSBP15848 533 aa11.12□□□□□ -0.63
LINC01006-204ENST00000435354 MC5RP33032 325 aa11.12□□□□□ -0.63
LINC01006-204ENST00000435354 CHRNA7P36544 502 aa11.12□□□□□ -0.63
LINC01006-204ENST00000435354 CEACAM6P40199 344 aa11.12□□□□□ -0.63
LINC01006-204ENST00000435354 LINC00205P59089 165 aa11.12□□□□□ -0.63
LINC01006-204ENST00000435354 HLA-DRB3P79483 266 aa11.12□□□□□ -0.63
LINC01006-204ENST00000435354 DRAXINQ8NBI3 349 aaPredicted RBP11.12□□□□□ -0.63
LINC01006-204ENST00000435354 DCUN1D4Q92564 292 aa11.12□□□□□ -0.63
LINC01006-204ENST00000435354 ARHGAP5-AS1Q96IT6 56 aa11.12□□□□□ -0.63
LINC01006-204ENST00000435354 URM1Q9BTM9 101 aaKnown RBP11.12□□□□□ -0.63
LINC01006-204ENST00000435354 PLGRKTQ9HBL7 147 aa11.12□□□□□ -0.63
LINC01006-204ENST00000435354 C12orf4Q9NQ89 552 aa11.12□□□□□ -0.63
LINC01006-204ENST00000435354 HSF4Q9ULV5 492 aa11.12□□□□□ -0.63
LINC01006-204ENST00000435354 FOXA2Q9Y261 457 aaPredicted RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms