RNA–Protein interactions for RNA: ENST00000434435.1

SMARCAL1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-208ENST00000434435 A0A1W2PRD5 423 aa18.88■□□□□ 0.61
SMARCAL1-208ENST00000434435 A0A1W2PRF3 423 aa18.88■□□□□ 0.61
SMARCAL1-208ENST00000434435 A0A1W2PRM7 423 aa18.88■□□□□ 0.61
SMARCAL1-208ENST00000434435 PGAM2P15259 253 aa18.88■□□□□ 0.61
SMARCAL1-208ENST00000434435 C1orf229Q6ZS94 237 aaPredicted RBP18.88■□□□□ 0.61
SMARCAL1-208ENST00000434435 LYG1Q8N1E2 194 aa18.88■□□□□ 0.61
SMARCAL1-208ENST00000434435 TEX29Q8N6K0 151 aa18.88■□□□□ 0.61
SMARCAL1-208ENST00000434435 OR13C8Q8NGS7 320 aa18.88■□□□□ 0.61
SMARCAL1-208ENST00000434435 ABHD14BQ96IU4 210 aa18.88■□□□□ 0.61
SMARCAL1-208ENST00000434435 AGMATQ9BSE5 352 aa18.88■□□□□ 0.61
SMARCAL1-208ENST00000434435 GHITMQ9H3K2 345 aa18.88■□□□□ 0.61
SMARCAL1-208ENST00000434435 PIPOXQ9P0Z9 390 aa18.88■□□□□ 0.61
SMARCAL1-208ENST00000434435 ZNF221Q9UK13 617 aa18.88■□□□□ 0.61
SMARCAL1-208ENST00000434435 TLN2Q9Y4G6 2542 aa18.88■□□□□ 0.61
SMARCAL1-208ENST00000434435 IGHV1-69DA0A0B4J2H0 117 aa18.87■□□□□ 0.61
SMARCAL1-208ENST00000434435 A8MV72 311 aaPredicted RBP18.87■□□□□ 0.61
SMARCAL1-208ENST00000434435 SLC22A5O76082 557 aa18.87■□□□□ 0.61
SMARCAL1-208ENST00000434435 IGHV1-69P01742 117 aa18.87■□□□□ 0.61
SMARCAL1-208ENST00000434435 GPR12P47775 334 aa18.87■□□□□ 0.61
SMARCAL1-208ENST00000434435 CCR6P51684 374 aa18.87■□□□□ 0.61
SMARCAL1-208ENST00000434435 UCP3P55916 312 aa18.87■□□□□ 0.61
SMARCAL1-208ENST00000434435 LGALS4P56470 323 aa18.87■□□□□ 0.61
SMARCAL1-208ENST00000434435 RBMS2Q15434 407 aaKnown RBP18.87■□□□□ 0.61
SMARCAL1-208ENST00000434435 LPCAT3Q6P1A2 487 aa18.87■□□□□ 0.61
SMARCAL1-208ENST00000434435 LDLRAD3Q86YD5 345 aa18.87■□□□□ 0.61
SMARCAL1-208ENST00000434435 OR4P4Q8NGL7 312 aa18.87■□□□□ 0.61
SMARCAL1-208ENST00000434435 CREB3L1Q96BA8 519 aa18.87■□□□□ 0.61
SMARCAL1-208ENST00000434435 SLC25A21Q9BQT8 299 aaPredicted RBP18.87■□□□□ 0.61
SMARCAL1-208ENST00000434435 DPAGT1Q9H3H5 408 aa18.87■□□□□ 0.61
SMARCAL1-208ENST00000434435 RNF150Q9ULK6 438 aa18.87■□□□□ 0.61
SMARCAL1-208ENST00000434435 FAM240BA0A1B0GVZ2 78 aa18.86■□□□□ 0.61
SMARCAL1-208ENST00000434435 RAB29O14966 203 aa18.86■□□□□ 0.61
SMARCAL1-208ENST00000434435 NPFFO15130 113 aa18.86■□□□□ 0.61
SMARCAL1-208ENST00000434435 IGHV4-38-2P0DP08 117 aa18.86■□□□□ 0.61
SMARCAL1-208ENST00000434435 HTR1DP28221 377 aa18.86■□□□□ 0.61
SMARCAL1-208ENST00000434435 SLC6A1P30531 599 aa18.86■□□□□ 0.61
SMARCAL1-208ENST00000434435 MIDNQ504T8 468 aa18.86■□□□□ 0.61
SMARCAL1-208ENST00000434435 ZNF645Q8N7E2 425 aa18.86■□□□□ 0.61
SMARCAL1-208ENST00000434435 NANPQ8TBE9 248 aa18.86■□□□□ 0.61
SMARCAL1-208ENST00000434435 ENKURQ8TC29 256 aa18.86■□□□□ 0.61
SMARCAL1-208ENST00000434435 MARCH1Q8TCQ1 289 aa18.86■□□□□ 0.61
SMARCAL1-208ENST00000434435 MRGPRFQ96AM1 343 aa18.86■□□□□ 0.61
SMARCAL1-208ENST00000434435 TBL2Q9Y4P3 447 aaKnown RBP18.86■□□□□ 0.61
SMARCAL1-208ENST00000434435 IGHV3OR16-10A0A075B7F0 116 aa18.85■□□□□ 0.61
SMARCAL1-208ENST00000434435 BUB1B-PAK6H3BSN5 160 aa18.85■□□□□ 0.61
SMARCAL1-208ENST00000434435 LY6G6DO95868 133 aa18.85■□□□□ 0.61
SMARCAL1-208ENST00000434435 ZNF137PP52743 207 aa18.85■□□□□ 0.61
SMARCAL1-208ENST00000434435 SURF2Q15527 256 aaPredicted RBP18.85■□□□□ 0.61
SMARCAL1-208ENST00000434435 KLF17Q5JT82 389 aaPredicted RBP18.85■□□□□ 0.61
SMARCAL1-208ENST00000434435 MINOS1Q5TGZ0 78 aa18.85■□□□□ 0.61
SMARCAL1-208ENST00000434435 ODF3L1Q8IXM7 274 aa18.85■□□□□ 0.61
SMARCAL1-208ENST00000434435 SLC38A6Q8IZM9 456 aa18.85■□□□□ 0.61
SMARCAL1-208ENST00000434435 ZNF436-AS1Q8NC38 126 aaPredicted RBP18.85■□□□□ 0.61
SMARCAL1-208ENST00000434435 ZFAND2BQ8WV99 257 aa18.85■□□□□ 0.61
SMARCAL1-208ENST00000434435 SCGB3A2Q96PL1 93 aa18.85■□□□□ 0.61
SMARCAL1-208ENST00000434435 SMR3AQ99954 134 aa18.85■□□□□ 0.61
SMARCAL1-208ENST00000434435 MINOS1-NBL1R4GNA1 71 aa18.85■□□□□ 0.61
SMARCAL1-208ENST00000434435 SAA2-SAA4A0A096LPE2 208 aa18.84■□□□□ 0.61
SMARCAL1-208ENST00000434435 HSD17B6O14756 317 aa18.84■□□□□ 0.61
SMARCAL1-208ENST00000434435 NDUFB6O95139 128 aa18.84■□□□□ 0.61
SMARCAL1-208ENST00000434435 FSHBP01225 129 aa18.84■□□□□ 0.61
SMARCAL1-208ENST00000434435 SAA2P0DJI9 122 aaPredicted RBP18.84■□□□□ 0.61
SMARCAL1-208ENST00000434435 CEACAM3P40198 252 aa18.84■□□□□ 0.61
SMARCAL1-208ENST00000434435 BAMBIQ13145 260 aa18.84■□□□□ 0.61
SMARCAL1-208ENST00000434435 MSMO1Q15800 293 aa18.84■□□□□ 0.61
SMARCAL1-208ENST00000434435 RUSC1-AS1Q66K80 236 aa18.84■□□□□ 0.61
SMARCAL1-208ENST00000434435 FAM71F2Q6NXP2 309 aa18.84■□□□□ 0.61
SMARCAL1-208ENST00000434435 ZDHHC22Q8N966 263 aa18.84■□□□□ 0.61
SMARCAL1-208ENST00000434435 ZFAND1Q8TCF1 268 aa18.84■□□□□ 0.61
SMARCAL1-208ENST00000434435 S1PR3Q99500 378 aa18.84■□□□□ 0.61
SMARCAL1-208ENST00000434435 RSRP1Q9BUV0 290 aa18.84■□□□□ 0.61
SMARCAL1-208ENST00000434435 CCL28Q9NRJ3 127 aa18.84■□□□□ 0.61
SMARCAL1-208ENST00000434435 COPZ2Q9P299 210 aa18.84■□□□□ 0.61
SMARCAL1-208ENST00000434435 DPM3Q9P2X0 92 aa18.84■□□□□ 0.61
SMARCAL1-208ENST00000434435 GAB2Q9UQC2 676 aa18.84■□□□□ 0.61
SMARCAL1-208ENST00000434435 LEUTXA8MZ59 168 aa18.83■□□□□ 0.6
SMARCAL1-208ENST00000434435 PTTG1O95997 202 aa18.83■□□□□ 0.6
SMARCAL1-208ENST00000434435 HNF1AP20823 631 aa18.83■□□□□ 0.6
SMARCAL1-208ENST00000434435 GNRHRP30968 328 aa18.83■□□□□ 0.6
SMARCAL1-208ENST00000434435 SAA4P35542 130 aa18.83■□□□□ 0.6
SMARCAL1-208ENST00000434435 CLEC9AQ6UXN8 241 aa18.83■□□□□ 0.6
SMARCAL1-208ENST00000434435 DRAM1Q8N682 238 aa18.83■□□□□ 0.6
SMARCAL1-208ENST00000434435 ZBTB34Q8NCN2 500 aa18.83■□□□□ 0.6
SMARCAL1-208ENST00000434435 ZNF486Q96H40 463 aaPredicted RBP18.83■□□□□ 0.6
SMARCAL1-208ENST00000434435 AKR1E2Q96JD6 320 aa18.83■□□□□ 0.6
SMARCAL1-208ENST00000434435 TMEM160Q9NX00 188 aa18.83■□□□□ 0.6
SMARCAL1-208ENST00000434435 SDHAF2Q9NX18 166 aa18.83■□□□□ 0.6
SMARCAL1-208ENST00000434435 C14orf166Q9Y224 244 aaKnown RBP18.83■□□□□ 0.6
SMARCAL1-208ENST00000434435 GPR31O00270 319 aa18.82■□□□□ 0.6
SMARCAL1-208ENST00000434435 BPIFB3P59826 476 aa18.82■□□□□ 0.6
SMARCAL1-208ENST00000434435 PLA1AQ53H76 456 aa18.82■□□□□ 0.6
SMARCAL1-208ENST00000434435 RPL39P5Q59GN2 51 aa18.82■□□□□ 0.6
SMARCAL1-208ENST00000434435 FAM120AOSQ5T036 256 aa18.82■□□□□ 0.6
SMARCAL1-208ENST00000434435 BRD3OSQ6XYD6 125 aa18.82■□□□□ 0.6
SMARCAL1-208ENST00000434435 ZNF833PQ6ZTB9 187 aa18.82■□□□□ 0.6
SMARCAL1-208ENST00000434435 LHFPL4Q7Z7J7 247 aa18.82■□□□□ 0.6
SMARCAL1-208ENST00000434435 RPEQ96AT9 228 aa18.82■□□□□ 0.6
SMARCAL1-208ENST00000434435 NUP50Q9UKX7 468 aa18.82■□□□□ 0.6
SMARCAL1-208ENST00000434435 VSIG4Q9Y279 399 aa18.82■□□□□ 0.6
SMARCAL1-208ENST00000434435 HIVEP1P15822 2718 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms