RNA–Protein interactions for RNA: ENST00000433762.1

COL6A3-207, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL6A3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-207ENST00000433762 SEC14L6B5MCN3 397 aa11.5□□□□□ -0.57
COL6A3-207ENST00000433762 TMEM250H0YL14 139 aa11.5□□□□□ -0.57
COL6A3-207ENST00000433762 IAPPP10997 89 aa11.5□□□□□ -0.57
COL6A3-207ENST00000433762 CBR1P16152 277 aa11.5□□□□□ -0.57
COL6A3-207ENST00000433762 ZNF66Q6ZN08 573 aa11.5□□□□□ -0.57
COL6A3-207ENST00000433762 OR4C12Q96R67 309 aa11.5□□□□□ -0.57
COL6A3-207ENST00000433762 OR2J1Q9GZK6 312 aa11.5□□□□□ -0.57
COL6A3-207ENST00000433762 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.5□□□□□ -0.57
COL6A3-207ENST00000433762 CLCF1Q9UBD9 225 aa11.5□□□□□ -0.57
COL6A3-207ENST00000433762 MAP1LC3B2A6NCE7 125 aa11.5□□□□□ -0.57
COL6A3-207ENST00000433762 PRR33A8MZF0 331 aa11.5□□□□□ -0.57
COL6A3-207ENST00000433762 RAB29O14966 203 aa11.5□□□□□ -0.57
COL6A3-207ENST00000433762 WDR1O75083 606 aa11.5□□□□□ -0.57
COL6A3-207ENST00000433762 IGHG3P01860 377 aa11.5□□□□□ -0.57
COL6A3-207ENST00000433762 ERVFRD-1P60508 538 aa11.5□□□□□ -0.57
COL6A3-207ENST00000433762 RAB11AP62491 216 aa11.5□□□□□ -0.57
COL6A3-207ENST00000433762 GUSBP1Q15486 140 aa11.5□□□□□ -0.57
COL6A3-207ENST00000433762 C3AR1Q16581 482 aa11.5□□□□□ -0.57
COL6A3-207ENST00000433762 VWC2Q2TAL6 325 aa11.5□□□□□ -0.57
COL6A3-207ENST00000433762 P4HA3Q7Z4N8 544 aa11.5□□□□□ -0.57
COL6A3-207ENST00000433762 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.5□□□□□ -0.57
COL6A3-207ENST00000433762 MAP1LC3BQ9GZQ8 125 aa11.5□□□□□ -0.57
COL6A3-207ENST00000433762 ZNF665Q9H7R5 613 aa11.5□□□□□ -0.57
COL6A3-207ENST00000433762 ZNF727A8MUV8 499 aa11.49□□□□□ -0.57
COL6A3-207ENST00000433762 TNFSF15O95150 251 aa11.49□□□□□ -0.57
COL6A3-207ENST00000433762 CLDN14O95500 239 aa11.49□□□□□ -0.57
COL6A3-207ENST00000433762 NUBP1P53384 320 aa11.49□□□□□ -0.57
COL6A3-207ENST00000433762 ZNF674Q2M3X9 581 aa11.49□□□□□ -0.57
COL6A3-207ENST00000433762 SLC25A40Q8TBP6 338 aa11.49□□□□□ -0.57
COL6A3-207ENST00000433762 LURAP1Q96LR2 239 aa11.49□□□□□ -0.57
COL6A3-207ENST00000433762 TAAR6Q96RI8 345 aa11.49□□□□□ -0.57
COL6A3-207ENST00000433762 RBKSQ9H477 322 aa11.49□□□□□ -0.57
COL6A3-207ENST00000433762 MANBALQ9NQG1 85 aa11.49□□□□□ -0.57
COL6A3-207ENST00000433762 CTXND1A0A1B0GTU2 59 aa11.49□□□□□ -0.57
COL6A3-207ENST00000433762 A0A1B0GWJ7 208 aa11.49□□□□□ -0.57
COL6A3-207ENST00000433762 LRRC30A6NM36 301 aa11.49□□□□□ -0.57
COL6A3-207ENST00000433762 FAM90A9PA6NNJ1 464 aa11.49□□□□□ -0.57
COL6A3-207ENST00000433762 CDIPTO14735 213 aa11.49□□□□□ -0.57
COL6A3-207ENST00000433762 CXCL1P09341 107 aa11.49□□□□□ -0.57
COL6A3-207ENST00000433762 SPATA46Q5T0L3 261 aa11.49□□□□□ -0.57
COL6A3-207ENST00000433762 CYP2G1PQ6ZSU1 146 aa11.49□□□□□ -0.57
COL6A3-207ENST00000433762 Q6ZT83 130 aa11.49□□□□□ -0.57
COL6A3-207ENST00000433762 LURAP1LQ8IV03 231 aa11.49□□□□□ -0.57
COL6A3-207ENST00000433762 CXXC4Q9H2H0 198 aa11.49□□□□□ -0.57
COL6A3-207ENST00000433762 DOK5Q9P104 306 aa11.49□□□□□ -0.57
COL6A3-207ENST00000433762 NAT8Q9UHE5 227 aa11.49□□□□□ -0.57
COL6A3-207ENST00000433762 MED13Q9UHV7 2174 aa11.48□□□□□ -0.57
COL6A3-207ENST00000433762 ZNHIT1O43257 154 aa11.48□□□□□ -0.57
COL6A3-207ENST00000433762 FBP1P09467 338 aa11.48□□□□□ -0.57
COL6A3-207ENST00000433762 KITLGP21583 273 aa11.48□□□□□ -0.57
COL6A3-207ENST00000433762 IGHV1-2P23083 117 aa11.48□□□□□ -0.57
COL6A3-207ENST00000433762 CD82P27701 267 aa11.48□□□□□ -0.57
COL6A3-207ENST00000433762 MZT1Q08AG7 82 aa11.48□□□□□ -0.57
COL6A3-207ENST00000433762 IZUMO4Q1ZYL8 232 aa11.48□□□□□ -0.57
COL6A3-207ENST00000433762 TMEM249Q2WGJ8 235 aa11.48□□□□□ -0.57
COL6A3-207ENST00000433762 AARDQ4LEZ3 155 aa11.48□□□□□ -0.57
COL6A3-207ENST00000433762 SPANXN5Q5MJ07 72 aa11.48□□□□□ -0.57
COL6A3-207ENST00000433762 WDR25Q64LD2 544 aaPredicted RBP11.48□□□□□ -0.57
COL6A3-207ENST00000433762 GAR1Q9NY12 217 aaKnown RBP11.48□□□□□ -0.57
COL6A3-207ENST00000433762 IL17BQ9UHF5 180 aa11.48□□□□□ -0.57
COL6A3-207ENST00000433762 ZFP92A6NM28 416 aa11.48□□□□□ -0.57
COL6A3-207ENST00000433762 WISP2O76076 250 aa11.48□□□□□ -0.57
COL6A3-207ENST00000433762 IGKV3-15P01624 115 aa11.48□□□□□ -0.57
COL6A3-207ENST00000433762 COX5AP20674 150 aa11.48□□□□□ -0.57
COL6A3-207ENST00000433762 S100A2P29034 98 aa11.48□□□□□ -0.57
COL6A3-207ENST00000433762 IL2RGP31785 369 aa11.48□□□□□ -0.57
COL6A3-207ENST00000433762 CEBPGP53567 150 aa11.48□□□□□ -0.57
COL6A3-207ENST00000433762 PSG7Q13046 419 aa11.48□□□□□ -0.57
COL6A3-207ENST00000433762 LCN15Q6UWW0 184 aa11.48□□□□□ -0.57
COL6A3-207ENST00000433762 NINJ1Q92982 152 aa11.48□□□□□ -0.57
COL6A3-207ENST00000433762 FAM210BQ96KR6 192 aa11.48□□□□□ -0.57
COL6A3-207ENST00000433762 HSD17B10Q99714 261 aaKnown RBP11.48□□□□□ -0.57
COL6A3-207ENST00000433762 DEFB127Q9H1M4 99 aa11.48□□□□□ -0.57
COL6A3-207ENST00000433762 OR51B6Q9H340 312 aa11.48□□□□□ -0.57
COL6A3-207ENST00000433762 VSIRQ9H7M9 311 aa11.48□□□□□ -0.57
COL6A3-207ENST00000433762 SLC39A9Q9NUM3 307 aa11.48□□□□□ -0.57
COL6A3-207ENST00000433762 DMRT1Q9Y5R6 373 aa11.48□□□□□ -0.57
COL6A3-207ENST00000433762 ZNF318Q5VUA4 2279 aa11.48□□□□□ -0.57
COL6A3-207ENST00000433762 C12orf77C9JDV5 145 aa11.47□□□□□ -0.57
COL6A3-207ENST00000433762 HIST1H2BKO60814 126 aa11.47□□□□□ -0.57
COL6A3-207ENST00000433762 IGHV2-70P01814 119 aa11.47□□□□□ -0.57
COL6A3-207ENST00000433762 HIST1H2BJP06899 126 aa11.47□□□□□ -0.57
COL6A3-207ENST00000433762 ZNF16P17020 682 aaPredicted RBP11.47□□□□□ -0.57
COL6A3-207ENST00000433762 HIST1H2BOP23527 126 aa11.47□□□□□ -0.57
COL6A3-207ENST00000433762 HIST1H2BBP33778 126 aa11.47□□□□□ -0.57
COL6A3-207ENST00000433762 IDH3GP51553 393 aaPredicted RBP11.47□□□□□ -0.57
COL6A3-207ENST00000433762 HIST1H2BDP58876 126 aa11.47□□□□□ -0.57
COL6A3-207ENST00000433762 HIST1H2BCP62807 126 aa11.47□□□□□ -0.57
COL6A3-207ENST00000433762 MEF2BQ02080 365 aaPredicted RBP11.47□□□□□ -0.57
COL6A3-207ENST00000433762 HIST2H2BEQ16778 126 aa11.47□□□□□ -0.57
COL6A3-207ENST00000433762 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.47□□□□□ -0.57
COL6A3-207ENST00000433762 HIST1H2BHQ93079 126 aa11.47□□□□□ -0.57
COL6A3-207ENST00000433762 HIST1H2BNQ99877 126 aa11.47□□□□□ -0.57
COL6A3-207ENST00000433762 HIST1H2BMQ99879 126 aa11.47□□□□□ -0.57
COL6A3-207ENST00000433762 COL25A1Q9BXS0 654 aaPredicted RBP11.47□□□□□ -0.57
COL6A3-207ENST00000433762 OBP2BQ9NPH6 170 aa11.47□□□□□ -0.57
COL6A3-207ENST00000433762 MIOXQ9UGB7 285 aa11.47□□□□□ -0.57
COL6A3-207ENST00000433762 PMS2P5A8MQ11 134 aa11.47□□□□□ -0.57
COL6A3-207ENST00000433762 CYB5BO43169 146 aa11.47□□□□□ -0.57
COL6A3-207ENST00000433762 ZNF737O75373 536 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms