RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 NPVFQ9HCQ7 196 aa3.23□□□□□ -1.89
SHPRH-205ENST00000433355 DNASE2O00115 360 aaPredicted RBP3.23□□□□□ -1.89
SHPRH-205ENST00000433355 EFSO43281 561 aa3.23□□□□□ -1.89
SHPRH-205ENST00000433355 YPEL1O60688 119 aa3.23□□□□□ -1.89
SHPRH-205ENST00000433355 IGKV3-15P01624 115 aa3.23□□□□□ -1.89
SHPRH-205ENST00000433355 MST1P26927 711 aa3.23□□□□□ -1.89
SHPRH-205ENST00000433355 PRSS12P56730 875 aa3.23□□□□□ -1.89
SHPRH-205ENST00000433355 OR10G9Q8NGN4 311 aa3.23□□□□□ -1.89
SHPRH-205ENST00000433355 CCL4L1Q8NHW4 92 aa3.23□□□□□ -1.89
SHPRH-205ENST00000433355 YPEL2Q96QA6 119 aa3.23□□□□□ -1.89
SHPRH-205ENST00000433355 CHIAQ9BZP6 476 aa3.23□□□□□ -1.89
SHPRH-205ENST00000433355 CD79AP11912 226 aa3.23□□□□□ -1.89
SHPRH-205ENST00000433355 AREGP15514 252 aa3.23□□□□□ -1.89
SHPRH-205ENST00000433355 GABRA2P47869 451 aa3.23□□□□□ -1.89
SHPRH-205ENST00000433355 PDZD11Q5EBL8 140 aa3.23□□□□□ -1.89
SHPRH-205ENST00000433355 SFT2D1Q8WV19 159 aa3.23□□□□□ -1.89
SHPRH-205ENST00000433355 NPAS1Q99742 590 aa3.23□□□□□ -1.89
SHPRH-205ENST00000433355 ADAT1Q9BUB4 502 aaKnown RBP3.23□□□□□ -1.89
SHPRH-205ENST00000433355 MSL2Q9HCI7 577 aa3.23□□□□□ -1.89
SHPRH-205ENST00000433355 C5orf49A4QMS7 147 aa3.23□□□□□ -1.89
SHPRH-205ENST00000433355 MS4A18H0YCH9 400 aa3.23□□□□□ -1.89
SHPRH-205ENST00000433355 H7C1C5 153 aa3.23□□□□□ -1.89
SHPRH-205ENST00000433355 GNG4P50150 75 aa3.23□□□□□ -1.89
SHPRH-205ENST00000433355 H2BFSP57053 126 aa3.23□□□□□ -1.89
SHPRH-205ENST00000433355 UBE2G1P62253 170 aa3.23□□□□□ -1.89
SHPRH-205ENST00000433355 MS4A18Q3C1V0 323 aa3.23□□□□□ -1.89
SHPRH-205ENST00000433355 SLC25A48Q6ZT89 311 aaKnown RBP3.23□□□□□ -1.89
SHPRH-205ENST00000433355 NR2C2APQ86WQ0 139 aa3.23□□□□□ -1.89
SHPRH-205ENST00000433355 ZNF761Q86XN6 746 aaPredicted RBP3.23□□□□□ -1.89
SHPRH-205ENST00000433355 CMTM2Q8TAZ6 248 aa3.23□□□□□ -1.89
SHPRH-205ENST00000433355 TPSD1Q9BZJ3 242 aa3.23□□□□□ -1.89
SHPRH-205ENST00000433355 A0A1W2PRE2 83 aa3.23□□□□□ -1.89
SHPRH-205ENST00000433355 A8MUA0 341 aa3.23□□□□□ -1.89
SHPRH-205ENST00000433355 SMAD9O15198 467 aaKnown RBP3.23□□□□□ -1.89
SHPRH-205ENST00000433355 KBTBD11O94819 623 aa3.23□□□□□ -1.89
SHPRH-205ENST00000433355 THY1P04216 161 aa3.23□□□□□ -1.89
SHPRH-205ENST00000433355 OR10J4P0C629 311 aa3.23□□□□□ -1.89
SHPRH-205ENST00000433355 GATA3P23771 443 aa3.23□□□□□ -1.89
SHPRH-205ENST00000433355 GPM6AP51674 278 aa3.23□□□□□ -1.89
SHPRH-205ENST00000433355 ATXN7L3Q14CW9 347 aaPredicted RBP3.23□□□□□ -1.89
SHPRH-205ENST00000433355 TMEM241Q24JQ0 296 aa3.23□□□□□ -1.89
SHPRH-205ENST00000433355 SMUG1Q53HV7 270 aa3.23□□□□□ -1.89
SHPRH-205ENST00000433355 NCMAPQ5T1S8 102 aa3.23□□□□□ -1.89
SHPRH-205ENST00000433355 SIGLECL1Q8N7X8 197 aa3.23□□□□□ -1.89
SHPRH-205ENST00000433355 MBD3L1Q8WWY6 194 aa3.23□□□□□ -1.89
SHPRH-205ENST00000433355 DYNLRB1Q9NP97 96 aa3.23□□□□□ -1.89
SHPRH-205ENST00000433355 DAOP14920 347 aa3.23□□□□□ -1.89
SHPRH-205ENST00000433355 RPL7P18124 248 aaKnown RBP3.23□□□□□ -1.89
SHPRH-205ENST00000433355 CT55Q8WUE5 264 aa3.23□□□□□ -1.89
SHPRH-205ENST00000433355 DAZAP1Q96EP5 407 aaKnown RBP3.23□□□□□ -1.89
SHPRH-205ENST00000433355 FLVCR2Q9UPI3 526 aa3.23□□□□□ -1.89
SHPRH-205ENST00000433355 LSM5Q9Y4Y9 91 aaKnown RBP3.23□□□□□ -1.89
SHPRH-205ENST00000433355 TRBV7-9A0A0J9YWB2 115 aa3.23□□□□□ -1.89
SHPRH-205ENST00000433355 ODAMA1E959 279 aa3.23□□□□□ -1.89
SHPRH-205ENST00000433355 CXCL13O43927 109 aa3.23□□□□□ -1.89
SHPRH-205ENST00000433355 DKK1O94907 266 aa3.23□□□□□ -1.89
SHPRH-205ENST00000433355 CLPSP04118 112 aa3.23□□□□□ -1.89
SHPRH-205ENST00000433355 HOXB3P14651 431 aaPredicted RBP3.23□□□□□ -1.89
SHPRH-205ENST00000433355 FMODQ06828 376 aa3.23□□□□□ -1.89
SHPRH-205ENST00000433355 ALKAL2Q6UX46 152 aa3.23□□□□□ -1.89
SHPRH-205ENST00000433355 C5orf17Q8NAS9 161 aa3.23□□□□□ -1.89
SHPRH-205ENST00000433355 ATOH1Q92858 354 aaPredicted RBP3.23□□□□□ -1.89
SHPRH-205ENST00000433355 AAMDCQ9H7C9 122 aa3.23□□□□□ -1.89
SHPRH-205ENST00000433355 RHBDD3Q9Y3P4 386 aa3.23□□□□□ -1.89
SHPRH-205ENST00000433355 ZNF16P17020 682 aaPredicted RBP3.23□□□□□ -1.89
SHPRH-205ENST00000433355 LAMTOR1Q6IAA8 161 aa3.23□□□□□ -1.89
SHPRH-205ENST00000433355 LYPD6Q86Y78 171 aa3.23□□□□□ -1.89
SHPRH-205ENST00000433355 LINC00311Q8N616 119 aa3.23□□□□□ -1.89
SHPRH-205ENST00000433355 OR9G1Q8NH87 305 aa3.23□□□□□ -1.89
SHPRH-205ENST00000433355 ABHD14AQ9BUJ0 271 aa3.23□□□□□ -1.89
SHPRH-205ENST00000433355 SAP30LQ9HAJ7 183 aa3.23□□□□□ -1.89
SHPRH-205ENST00000433355 MBD3L4A6NDZ8 208 aaPredicted RBP3.22□□□□□ -1.89
SHPRH-205ENST00000433355 MBD3L3A6NE82 208 aaPredicted RBP3.22□□□□□ -1.89
SHPRH-205ENST00000433355 MBD3L5A6NJ08 208 aaPredicted RBP3.22□□□□□ -1.89
SHPRH-205ENST00000433355 SELLP14151 372 aa3.22□□□□□ -1.89
SHPRH-205ENST00000433355 FOXL1Q12952 345 aa3.22□□□□□ -1.89
SHPRH-205ENST00000433355 C20orf204Q6ZNR8 217 aa3.22□□□□□ -1.89
SHPRH-205ENST00000433355 MBD3L2Q8NHZ7 208 aaPredicted RBP3.22□□□□□ -1.89
SHPRH-205ENST00000433355 RPS10P5Q9NQ39 176 aa3.22□□□□□ -1.89
SHPRH-205ENST00000433355 ZNF331Q9NQX6 463 aaPredicted RBP3.22□□□□□ -1.89
SHPRH-205ENST00000433355 ANKRD10Q9NXR5 420 aa3.22□□□□□ -1.89
SHPRH-205ENST00000433355 CACNG5Q9UF02 275 aa3.22□□□□□ -1.89
SHPRH-205ENST00000433355 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.22□□□□□ -1.89
SHPRH-205ENST00000433355 ZNF727A8MUV8 499 aa3.22□□□□□ -1.89
SHPRH-205ENST00000433355 PIN1P1O15428 100 aa3.22□□□□□ -1.89
SHPRH-205ENST00000433355 SP1P08047 785 aa3.22□□□□□ -1.89
SHPRH-205ENST00000433355 IGFBP6P24592 240 aaPredicted RBP3.22□□□□□ -1.89
SHPRH-205ENST00000433355 CDC34P49427 236 aaPredicted RBP3.22□□□□□ -1.89
SHPRH-205ENST00000433355 CAV3P56539 151 aa3.22□□□□□ -1.89
SHPRH-205ENST00000433355 DSCR9P59020 149 aa3.22□□□□□ -1.89
SHPRH-205ENST00000433355 UNC119Q13432 240 aa3.22□□□□□ -1.89
SHPRH-205ENST00000433355 PMCHL1Q16048 86 aa3.22□□□□□ -1.89
SHPRH-205ENST00000433355 TMEFF1Q8IYR6 380 aa3.22□□□□□ -1.89
SHPRH-205ENST00000433355 FAM213BQ8TBF2 198 aa3.22□□□□□ -1.89
SHPRH-205ENST00000433355 RHOVQ96L33 236 aa3.22□□□□□ -1.89
SHPRH-205ENST00000433355 A0A0B4J203 849 aa3.22□□□□□ -1.89
SHPRH-205ENST00000433355 C16orf97H3BN30 126 aa3.22□□□□□ -1.89
SHPRH-205ENST00000433355 NPBWR2P48146 333 aa3.22□□□□□ -1.89
SHPRH-205ENST00000433355 FZD5Q13467 585 aa3.22□□□□□ -1.89
SHPRH-205ENST00000433355 C1orf61Q13536 156 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms