RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 LOC102725191A0A1B0GVB3 256 aa9.82□□□□□ -0.84
HMGCS1-202ENST00000433297 C20orf202A1L168 122 aa9.82□□□□□ -0.84
HMGCS1-202ENST00000433297 CRISP2P16562 243 aa9.82□□□□□ -0.84
HMGCS1-202ENST00000433297 RPL15P61313 204 aaKnown RBP9.82□□□□□ -0.84
HMGCS1-202ENST00000433297 MRPS21P82921 87 aaKnown RBP9.82□□□□□ -0.84
HMGCS1-202ENST00000433297 DAZAP2Q15038 168 aaPredicted RBP9.82□□□□□ -0.84
HMGCS1-202ENST00000433297 RNF151Q2KHN1 245 aa9.82□□□□□ -0.84
HMGCS1-202ENST00000433297 SLC25A53Q5H9E4 307 aa9.82□□□□□ -0.84
HMGCS1-202ENST00000433297 PLXDC1Q8IUK5 500 aa9.82□□□□□ -0.84
HMGCS1-202ENST00000433297 ABCA7Q8IZY2 2146 aa9.82□□□□□ -0.84
HMGCS1-202ENST00000433297 ZNF114Q8NC26 417 aa9.82□□□□□ -0.84
HMGCS1-202ENST00000433297 CLN8Q9UBY8 286 aa9.82□□□□□ -0.84
HMGCS1-202ENST00000433297 OR2W1Q9Y3N9 320 aa9.82□□□□□ -0.84
HMGCS1-202ENST00000433297 ATP23Q9Y6H3 246 aa9.82□□□□□ -0.84
HMGCS1-202ENST00000433297 KRASP01116 189 aa9.81□□□□□ -0.84
HMGCS1-202ENST00000433297 IGKV1-5P01602 117 aa9.81□□□□□ -0.84
HMGCS1-202ENST00000433297 UMODP07911 640 aa9.81□□□□□ -0.84
HMGCS1-202ENST00000433297 KITLGP21583 273 aa9.81□□□□□ -0.84
HMGCS1-202ENST00000433297 SOX8P57073 446 aa9.81□□□□□ -0.84
HMGCS1-202ENST00000433297 ZNF90Q03938 601 aa9.81□□□□□ -0.84
HMGCS1-202ENST00000433297 TFF3Q07654 80 aa9.81□□□□□ -0.84
HMGCS1-202ENST00000433297 RHBDD2Q6NTF9 364 aa9.81□□□□□ -0.84
HMGCS1-202ENST00000433297 CENPVQ7Z7K6 275 aaPredicted RBP9.81□□□□□ -0.84
HMGCS1-202ENST00000433297 LINC01551Q86U37 167 aa9.81□□□□□ -0.84
HMGCS1-202ENST00000433297 PSMF1Q92530 271 aa9.81□□□□□ -0.84
HMGCS1-202ENST00000433297 TXN2Q99757 166 aa9.81□□□□□ -0.84
HMGCS1-202ENST00000433297 MDFIC2A0A1B0GVS7 189 aa9.81□□□□□ -0.84
HMGCS1-202ENST00000433297 F2Z2F3 143 aa9.81□□□□□ -0.84
HMGCS1-202ENST00000433297 TYMSP04818 313 aa9.81□□□□□ -0.84
HMGCS1-202ENST00000433297 IL6RP08887 468 aaPredicted RBP9.81□□□□□ -0.84
HMGCS1-202ENST00000433297 LCN2P80188 198 aa9.81□□□□□ -0.84
HMGCS1-202ENST00000433297 MSMO1Q15800 293 aa9.81□□□□□ -0.84
HMGCS1-202ENST00000433297 TPTE2P1Q5T6R2 138 aa9.81□□□□□ -0.84
HMGCS1-202ENST00000433297 NUFIP2Q7Z417 695 aaKnown RBP9.81□□□□□ -0.84
HMGCS1-202ENST00000433297 MCEMP1Q8IX19 187 aa9.81□□□□□ -0.84
HMGCS1-202ENST00000433297 OR56B2PQ8NGI1 322 aa9.81□□□□□ -0.84
HMGCS1-202ENST00000433297 OR5P3Q8WZ94 311 aa9.81□□□□□ -0.84
HMGCS1-202ENST00000433297 ZNF501Q96CX3 271 aaPredicted RBP9.81□□□□□ -0.84
HMGCS1-202ENST00000433297 IGHV1OR21-1A0A087WYE8 117 aa9.81□□□□□ -0.84
HMGCS1-202ENST00000433297 TRAPPC2LH3BP13 241 aa9.81□□□□□ -0.84
HMGCS1-202ENST00000433297 TRAV38-1A0A0B4J264 116 aa9.8□□□□□ -0.84
HMGCS1-202ENST00000433297 hCG_38984A0A1B0GV85 526 aa9.8□□□□□ -0.84
HMGCS1-202ENST00000433297 SIRPB1O00241 398 aa9.8□□□□□ -0.84
HMGCS1-202ENST00000433297 CELA2AP08217 269 aa9.8□□□□□ -0.84
HMGCS1-202ENST00000433297 CTXN2P0C2S0 81 aa9.8□□□□□ -0.84
HMGCS1-202ENST00000433297 COX5AP20674 150 aa9.8□□□□□ -0.84
HMGCS1-202ENST00000433297 TGFBR3Q03167 851 aa9.8□□□□□ -0.84
HMGCS1-202ENST00000433297 GCSAMLQ5JQS6 135 aa9.8□□□□□ -0.84
HMGCS1-202ENST00000433297 MKXQ8IYA7 352 aa9.8□□□□□ -0.84
HMGCS1-202ENST00000433297 ARL6IP6Q8N6S5 226 aa9.8□□□□□ -0.84
HMGCS1-202ENST00000433297 RNASE8Q8TDE3 154 aaKnown RBP9.8□□□□□ -0.84
HMGCS1-202ENST00000433297 SPACA9Q96E40 222 aaPredicted RBP9.8□□□□□ -0.84
HMGCS1-202ENST00000433297 OR6C1Q96RD1 312 aa9.8□□□□□ -0.84
HMGCS1-202ENST00000433297 TIAF1O95411 115 aa9.8□□□□□ -0.84
HMGCS1-202ENST00000433297 GNB1P62873 340 aa9.8□□□□□ -0.84
HMGCS1-202ENST00000433297 CEACAM16Q2WEN9 425 aa9.8□□□□□ -0.84
HMGCS1-202ENST00000433297 PCSK4Q6UW60 755 aa9.8□□□□□ -0.84
HMGCS1-202ENST00000433297 ZIC4Q8N9L1 334 aa9.8□□□□□ -0.84
HMGCS1-202ENST00000433297 SLC35E1Q96K37 410 aa9.8□□□□□ -0.84
HMGCS1-202ENST00000433297 ZFP30Q9Y2G7 519 aa9.8□□□□□ -0.84
HMGCS1-202ENST00000433297 IGHV3-64DA0A0J9YX35 117 aa9.8□□□□□ -0.84
HMGCS1-202ENST00000433297 F6UZH7 168 aa9.8□□□□□ -0.84
HMGCS1-202ENST00000433297 SLC17A3O00476 420 aa9.8□□□□□ -0.84
HMGCS1-202ENST00000433297 SYNGR1O43759 233 aa9.8□□□□□ -0.84
HMGCS1-202ENST00000433297 DUX1O43812 170 aa9.8□□□□□ -0.84
HMGCS1-202ENST00000433297 CRYABP02511 175 aaKnown RBP9.8□□□□□ -0.84
HMGCS1-202ENST00000433297 IGFBP7Q16270 282 aa9.8□□□□□ -0.84
HMGCS1-202ENST00000433297 TMEM42Q69YG0 159 aa9.8□□□□□ -0.84
HMGCS1-202ENST00000433297 C20orf144Q9BQM9 153 aa9.8□□□□□ -0.84
HMGCS1-202ENST00000433297 CRISPLD2Q9H0B8 497 aa9.8□□□□□ -0.84
HMGCS1-202ENST00000433297 ELOVL5Q9NYP7 299 aa9.8□□□□□ -0.84
HMGCS1-202ENST00000433297 IL36GQ9NZH8 169 aa9.8□□□□□ -0.84
HMGCS1-202ENST00000433297 MTCH1Q9NZJ7 389 aa9.8□□□□□ -0.84
HMGCS1-202ENST00000433297 CRIM1Q9NZV1 1036 aa9.8□□□□□ -0.84
HMGCS1-202ENST00000433297 FER1L5A0AVI2 2057 aa9.79□□□□□ -0.84
HMGCS1-202ENST00000433297 A0A0J9YW62 118 aa9.79□□□□□ -0.84
HMGCS1-202ENST00000433297 FCN1O00602 326 aa9.79□□□□□ -0.84
HMGCS1-202ENST00000433297 RBFOX2O43251 390 aaKnown RBP eCLIP9.79□□□□□ -0.845e-28■■■■■ 35
HMGCS1-202ENST00000433297 NTF4P34130 210 aa9.79□□□□□ -0.84
HMGCS1-202ENST00000433297 CLDN15P56746 228 aa9.79□□□□□ -0.84
HMGCS1-202ENST00000433297 PRDX4Q13162 271 aa9.79□□□□□ -0.84
HMGCS1-202ENST00000433297 COTL1Q14019 142 aa9.79□□□□□ -0.84
HMGCS1-202ENST00000433297 Q6ZN92 141 aa9.79□□□□□ -0.84
HMGCS1-202ENST00000433297 Q6ZSR3 168 aa9.79□□□□□ -0.84
HMGCS1-202ENST00000433297 FGFRL1Q8N441 504 aa9.79□□□□□ -0.84
HMGCS1-202ENST00000433297 SIGLECL1Q8N7X8 197 aa9.79□□□□□ -0.84
HMGCS1-202ENST00000433297 MTIF3Q9H2K0 278 aaKnown RBP9.79□□□□□ -0.84
HMGCS1-202ENST00000433297 MMP17Q9ULZ9 603 aa9.79□□□□□ -0.84
HMGCS1-202ENST00000433297 R4GN57 208 aa9.79□□□□□ -0.84
HMGCS1-202ENST00000433297 CELSR3Q9NYQ7 3312 aa9.79□□□□□ -0.84
HMGCS1-202ENST00000433297 IER3P46695 156 aa9.79□□□□□ -0.84
HMGCS1-202ENST00000433297 CCR5P51681 352 aa9.79□□□□□ -0.84
HMGCS1-202ENST00000433297 EDDM3BP56851 147 aa9.79□□□□□ -0.84
HMGCS1-202ENST00000433297 RANP62826 216 aaKnown RBP9.79□□□□□ -0.84
HMGCS1-202ENST00000433297 SUMO1P63165 101 aaKnown RBP9.79□□□□□ -0.84
HMGCS1-202ENST00000433297 ZNF816Q0VGE8 651 aaPredicted RBP9.79□□□□□ -0.84
HMGCS1-202ENST00000433297 STPG4Q8N801 248 aa9.79□□□□□ -0.84
HMGCS1-202ENST00000433297 OR10P1Q8NGE3 313 aa9.79□□□□□ -0.84
HMGCS1-202ENST00000433297 OR1L1Q8NH94 360 aa9.79□□□□□ -0.84
HMGCS1-202ENST00000433297 SFRP2Q96HF1 295 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms