RNA–Protein interactions for RNA: ENST00000431736.6

UBE4A-202, Transcript of ubiquitination factor E4A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBE4A, Length 6,061 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-202ENST00000431736 SLC35E1Q96K37 410 aa3.72□□□□□ -1.81
UBE4A-202ENST00000431736 SULT4A1Q9BR01 284 aa3.72□□□□□ -1.81
UBE4A-202ENST00000431736 NICN1Q9BSH3 213 aa3.72□□□□□ -1.81
UBE4A-202ENST00000431736 FBXL15Q9H469 300 aa3.72□□□□□ -1.81
UBE4A-202ENST00000431736 PLEKHA3Q9HB20 300 aa3.72□□□□□ -1.81
UBE4A-202ENST00000431736 A6NDX4 124 aa3.71□□□□□ -1.81
UBE4A-202ENST00000431736 GGCTO75223 188 aaKnown RBP3.71□□□□□ -1.81
UBE4A-202ENST00000431736 PPP1CCP36873 323 aaKnown RBP3.71□□□□□ -1.81
UBE4A-202ENST00000431736 WFDC3Q8IUB2 231 aa3.71□□□□□ -1.81
UBE4A-202ENST00000431736 BVESQ8NE79 360 aa3.71□□□□□ -1.81
UBE4A-202ENST00000431736 C17orf50Q8WW18 174 aa3.71□□□□□ -1.81
UBE4A-202ENST00000431736 LGALS12Q96DT0 336 aa3.71□□□□□ -1.81
UBE4A-202ENST00000431736 EAF1Q96JC9 268 aaPredicted RBP3.71□□□□□ -1.81
UBE4A-202ENST00000431736 TEP1Q99973 2627 aaKnown RBP3.71□□□□□ -1.81
UBE4A-202ENST00000431736 L7N2F9 121 aa3.71□□□□□ -1.82
UBE4A-202ENST00000431736 LYPD3O95274 346 aa3.71□□□□□ -1.82
UBE4A-202ENST00000431736 SDC2P34741 201 aa3.71□□□□□ -1.82
UBE4A-202ENST00000431736 ARL3P36405 182 aa3.71□□□□□ -1.82
UBE4A-202ENST00000431736 RAB11AP62491 216 aa3.71□□□□□ -1.82
UBE4A-202ENST00000431736 VAMP2P63027 116 aa3.71□□□□□ -1.82
UBE4A-202ENST00000431736 EXOSC2Q13868 293 aaKnown RBP3.71□□□□□ -1.82
UBE4A-202ENST00000431736 CDK5R1Q15078 307 aa3.71□□□□□ -1.82
UBE4A-202ENST00000431736 HES5Q5TA89 166 aa3.71□□□□□ -1.82
UBE4A-202ENST00000431736 KCNIP4Q6PIL6 250 aa3.71□□□□□ -1.82
UBE4A-202ENST00000431736 CD177Q8N6Q3 437 aa3.71□□□□□ -1.82
UBE4A-202ENST00000431736 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.71□□□□□ -1.82
UBE4A-202ENST00000431736 LEAP2Q969E1 77 aa3.71□□□□□ -1.82
UBE4A-202ENST00000431736 PINX1Q96BK5 328 aaKnown RBP3.71□□□□□ -1.82
UBE4A-202ENST00000431736 ZNF75AQ96N20 296 aa3.71□□□□□ -1.82
UBE4A-202ENST00000431736 PRR25Q96S07 402 aa3.71□□□□□ -1.82
UBE4A-202ENST00000431736 SPATA2Q9UM82 520 aa3.71□□□□□ -1.82
UBE4A-202ENST00000431736 SMCO3A2RU48 225 aa3.71□□□□□ -1.82
UBE4A-202ENST00000431736 GEMIN2O14893 280 aaKnown RBP3.71□□□□□ -1.82
UBE4A-202ENST00000431736 OR2A4O95047 310 aa3.71□□□□□ -1.82
UBE4A-202ENST00000431736 SCTP09683 121 aa3.71□□□□□ -1.82
UBE4A-202ENST00000431736 CRYBA2P53672 197 aa3.71□□□□□ -1.82
UBE4A-202ENST00000431736 CD81P60033 236 aa3.71□□□□□ -1.82
UBE4A-202ENST00000431736 TMEM179BQ7Z7N9 219 aa3.71□□□□□ -1.82
UBE4A-202ENST00000431736 COL27A1Q8IZC6 1860 aaPredicted RBP3.71□□□□□ -1.82
UBE4A-202ENST00000431736 ZFAND1Q8TCF1 268 aa3.71□□□□□ -1.82
UBE4A-202ENST00000431736 MARC2Q969Z3 335 aa3.71□□□□□ -1.82
UBE4A-202ENST00000431736 OR2A7Q96R45 310 aa3.71□□□□□ -1.82
UBE4A-202ENST00000431736 NDUFA13Q9P0J0 144 aa3.71□□□□□ -1.82
UBE4A-202ENST00000431736 SHISA3A0PJX4 238 aa3.71□□□□□ -1.82
UBE4A-202ENST00000431736 AVPP01185 164 aa3.71□□□□□ -1.82
UBE4A-202ENST00000431736 CT45A6P0DMU7 189 aa3.71□□□□□ -1.82
UBE4A-202ENST00000431736 CT45A5P0DMU8 189 aa3.71□□□□□ -1.82
UBE4A-202ENST00000431736 CT45A7P0DMV0 189 aa3.71□□□□□ -1.82
UBE4A-202ENST00000431736 TFPI2P48307 235 aa3.71□□□□□ -1.82
UBE4A-202ENST00000431736 GZMMP51124 257 aa3.71□□□□□ -1.82
UBE4A-202ENST00000431736 MXD1Q05195 221 aa3.71□□□□□ -1.82
UBE4A-202ENST00000431736 CT45A1Q5HYN5 189 aa3.71□□□□□ -1.82
UBE4A-202ENST00000431736 OR2B11Q5JQS5 317 aa3.71□□□□□ -1.82
UBE4A-202ENST00000431736 STHQ8IWL8 128 aa3.71□□□□□ -1.82
UBE4A-202ENST00000431736 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.71□□□□□ -1.82
UBE4A-202ENST00000431736 CT45A3Q8NHU0 189 aa3.71□□□□□ -1.82
UBE4A-202ENST00000431736 SMIM19Q96E16 107 aa3.71□□□□□ -1.82
UBE4A-202ENST00000431736 MISP3Q96FF7 219 aa3.71□□□□□ -1.82
UBE4A-202ENST00000431736 HSD17B10Q99714 261 aaKnown RBP3.71□□□□□ -1.82
UBE4A-202ENST00000431736 DIMT1Q9UNQ2 313 aaKnown RBP3.71□□□□□ -1.82
UBE4A-202ENST00000431736 AK6Q9Y3D8 172 aaKnown RBP3.71□□□□□ -1.82
UBE4A-202ENST00000431736 PCSK5Q92824 1860 aa3.71□□□□□ -1.82
UBE4A-202ENST00000431736 EML6Q6ZMW3 1958 aa3.71□□□□□ -1.82
UBE4A-202ENST00000431736 TRDCB7Z8K6 153 aa3.71□□□□□ -1.82
UBE4A-202ENST00000431736 RRHO14718 337 aa3.71□□□□□ -1.82
UBE4A-202ENST00000431736 MAGEB4O15481 346 aaPredicted RBP3.71□□□□□ -1.82
UBE4A-202ENST00000431736 ACKR3P25106 362 aa3.71□□□□□ -1.82
UBE4A-202ENST00000431736 DYNLT3P51808 116 aa3.71□□□□□ -1.82
UBE4A-202ENST00000431736 EBLN2Q6P2I7 272 aa3.71□□□□□ -1.82
UBE4A-202ENST00000431736 C4orf3Q8WVX3 66 aa3.71□□□□□ -1.82
UBE4A-202ENST00000431736 OR14A2Q96R54 314 aa3.71□□□□□ -1.82
UBE4A-202ENST00000431736 PEF1Q9UBV8 284 aaKnown RBP3.71□□□□□ -1.82
UBE4A-202ENST00000431736 TCRBV3S1A0A5B6 114 aa3.7□□□□□ -1.82
UBE4A-202ENST00000431736 SLC33A1O00400 549 aaPredicted RBP3.7□□□□□ -1.82
UBE4A-202ENST00000431736 PVALBP20472 110 aaPredicted RBP3.7□□□□□ -1.82
UBE4A-202ENST00000431736 RBMXP38159 391 aaKnown RBP3.7□□□□□ -1.82
UBE4A-202ENST00000431736 HTD2P86397 168 aa3.7□□□□□ -1.82
UBE4A-202ENST00000431736 IL18Q14116 193 aa3.7□□□□□ -1.82
UBE4A-202ENST00000431736 CLINT1Q14677 625 aa3.7□□□□□ -1.82
UBE4A-202ENST00000431736 CDNFQ49AH0 187 aa3.7□□□□□ -1.82
UBE4A-202ENST00000431736 TMEM69Q5SWH9 247 aa3.7□□□□□ -1.82
UBE4A-202ENST00000431736 ZFAND6Q6FIF0 208 aa3.7□□□□□ -1.82
UBE4A-202ENST00000431736 OR4A4PQ8NGN8 299 aa3.7□□□□□ -1.82
UBE4A-202ENST00000431736 SVIPQ8NHG7 77 aa3.7□□□□□ -1.82
UBE4A-202ENST00000431736 FAM3DQ96BQ1 224 aa3.7□□□□□ -1.82
UBE4A-202ENST00000431736 METTL26Q96S19 204 aa3.7□□□□□ -1.82
UBE4A-202ENST00000431736 HEYLQ9NQ87 328 aaPredicted RBP3.7□□□□□ -1.82
UBE4A-202ENST00000431736 EHFQ9NZC4 300 aa3.7□□□□□ -1.82
UBE4A-202ENST00000431736 FBXL17Q9UF56 701 aa3.7□□□□□ -1.82
UBE4A-202ENST00000431736 KIAA1549Q9HCM3 1950 aa3.7□□□□□ -1.82
UBE4A-202ENST00000431736 TRAV18A0A075B6X5 111 aa3.7□□□□□ -1.82
UBE4A-202ENST00000431736 FAM223BA6NKX1 122 aa3.7□□□□□ -1.82
UBE4A-202ENST00000431736 OR11H12B2RN74 326 aa3.7□□□□□ -1.82
UBE4A-202ENST00000431736 IFNA10P01566 189 aa3.7□□□□□ -1.82
UBE4A-202ENST00000431736 FGF2P09038 288 aa3.7□□□□□ -1.82
UBE4A-202ENST00000431736 C5orf64Q2M2E5 130 aa3.7□□□□□ -1.82
UBE4A-202ENST00000431736 PIGYQ3MUY2 71 aa3.7□□□□□ -1.82
UBE4A-202ENST00000431736 FAM223AQ8IWN6 122 aa3.7□□□□□ -1.82
UBE4A-202ENST00000431736 OR1L8Q8NGR8 309 aa3.7□□□□□ -1.82
UBE4A-202ENST00000431736 WFDC6Q9BQY6 131 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms