RNA–Protein interactions for RNA: ENST00000430711.5

COL28A1-202, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 5

Gene COL28A1, Length 2,323 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-202ENST00000430711 OR1L1Q8NH94 360 aa6.04□□□□□ -1.44
COL28A1-202ENST00000430711 KCNE4Q8WWG9 221 aa6.04□□□□□ -1.44
COL28A1-202ENST00000430711 SGCZQ96LD1 299 aa6.04□□□□□ -1.44
COL28A1-202ENST00000430711 TTTY12Q9BZ98 90 aa6.04□□□□□ -1.44
COL28A1-202ENST00000430711 PLK3Q9H4B4 646 aa6.04□□□□□ -1.44
COL28A1-202ENST00000430711 SLC25A22Q9H936 323 aa6.04□□□□□ -1.44
COL28A1-202ENST00000430711 CLN8Q9UBY8 286 aa6.04□□□□□ -1.44
COL28A1-202ENST00000430711 KCNS2Q9ULS6 477 aa6.04□□□□□ -1.44
COL28A1-202ENST00000430711 FZR1Q9UM11 496 aa6.04□□□□□ -1.44
COL28A1-202ENST00000430711 LOXL2Q9Y4K0 774 aa6.04□□□□□ -1.44
COL28A1-202ENST00000430711 GCN1Q92616 2671 aaKnown RBP6.04□□□□□ -1.44
COL28A1-202ENST00000430711 CADP27708 2225 aa6.04□□□□□ -1.44
COL28A1-202ENST00000430711 IGHV3-43A0A0B4J1X8 118 aa6.04□□□□□ -1.44
COL28A1-202ENST00000430711 PGPEP1LA6NFU8 196 aa6.04□□□□□ -1.44
COL28A1-202ENST00000430711 CDIPTO14735 213 aa6.04□□□□□ -1.44
COL28A1-202ENST00000430711 SOX15O60248 233 aa6.04□□□□□ -1.44
COL28A1-202ENST00000430711 OR2H2O95918 312 aa6.04□□□□□ -1.44
COL28A1-202ENST00000430711 S100A9P06702 114 aaKnown RBP6.04□□□□□ -1.44
COL28A1-202ENST00000430711 IGHV3-43DP0DP04 118 aa6.04□□□□□ -1.44
COL28A1-202ENST00000430711 CEACAM1P13688 526 aa6.04□□□□□ -1.44
COL28A1-202ENST00000430711 NPPCP23582 126 aa6.04□□□□□ -1.44
COL28A1-202ENST00000430711 G6PCP35575 357 aa6.04□□□□□ -1.44
COL28A1-202ENST00000430711 ZNF816Q0VGE8 651 aaPredicted RBP6.04□□□□□ -1.44
COL28A1-202ENST00000430711 SRSF6Q13247 344 aaKnown RBP6.04□□□□□ -1.44
COL28A1-202ENST00000430711 P2RY6Q15077 328 aa6.04□□□□□ -1.44
COL28A1-202ENST00000430711 MDP1Q86V88 176 aa6.04□□□□□ -1.44
COL28A1-202ENST00000430711 FAM58AQ8N1B3 248 aa6.04□□□□□ -1.44
COL28A1-202ENST00000430711 DRAM1Q8N682 238 aa6.04□□□□□ -1.44
COL28A1-202ENST00000430711 OR10V1Q8NGI7 309 aa6.04□□□□□ -1.44
COL28A1-202ENST00000430711 TVP23CQ96ET8 276 aa6.04□□□□□ -1.44
COL28A1-202ENST00000430711 ICE1Q9Y2F5 2266 aa6.04□□□□□ -1.44
COL28A1-202ENST00000430711 FLNBO75369 2602 aaKnown RBP6.04□□□□□ -1.44
COL28A1-202ENST00000430711 HCFC1P51610 2035 aa6.04□□□□□ -1.44
COL28A1-202ENST00000430711 IGKV3D-15A0A087WSY6 115 aa6.03□□□□□ -1.44
COL28A1-202ENST00000430711 CEBPZOSA8MTT3 80 aa6.03□□□□□ -1.44
COL28A1-202ENST00000430711 DNPH1O43598 174 aa6.03□□□□□ -1.44
COL28A1-202ENST00000430711 HSPB1P04792 205 aaKnown RBP6.03□□□□□ -1.44
COL28A1-202ENST00000430711 SP9P0CG40 484 aa6.03□□□□□ -1.44
COL28A1-202ENST00000430711 BCL2P10415 239 aa6.03□□□□□ -1.44
COL28A1-202ENST00000430711 PCBD1P61457 104 aa6.03□□□□□ -1.44
COL28A1-202ENST00000430711 FIP1L1Q6UN15 594 aaKnown RBP6.03□□□□□ -1.44
COL28A1-202ENST00000430711 WDR5BQ86VZ2 330 aa6.03□□□□□ -1.44
COL28A1-202ENST00000430711 GCNT2Q8N0V5 402 aa6.03□□□□□ -1.44
COL28A1-202ENST00000430711 OR52L2PQ8NGH6 319 aa6.03□□□□□ -1.44
COL28A1-202ENST00000430711 OR10J5Q8NHC4 309 aa6.03□□□□□ -1.44
COL28A1-202ENST00000430711 TCTEX1D2Q8WW35 142 aa6.03□□□□□ -1.44
COL28A1-202ENST00000430711 OR2J1Q9GZK6 312 aa6.03□□□□□ -1.44
COL28A1-202ENST00000430711 DEFB127Q9H1M4 99 aa6.03□□□□□ -1.44
COL28A1-202ENST00000430711 OR51I2Q9H344 312 aa6.03□□□□□ -1.44
COL28A1-202ENST00000430711 GP6Q9HCN6 339 aa6.03□□□□□ -1.44
COL28A1-202ENST00000430711 UFSP2Q9NUQ7 469 aa6.03□□□□□ -1.44
COL28A1-202ENST00000430711 PSENENQ9NZ42 101 aa6.03□□□□□ -1.44
COL28A1-202ENST00000430711 A0A1B0GU03 582 aa6.03□□□□□ -1.44
COL28A1-202ENST00000430711 C17orf98A8MV24 154 aa6.03□□□□□ -1.44
COL28A1-202ENST00000430711 DEFB108AA8MXU0 73 aa6.03□□□□□ -1.44
COL28A1-202ENST00000430711 C1QTNF9BB2RNN3 333 aa6.03□□□□□ -1.44
COL28A1-202ENST00000430711 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.03□□□□□ -1.44
COL28A1-202ENST00000430711 SYNGR2O43760 224 aa6.03□□□□□ -1.44
COL28A1-202ENST00000430711 S1PR2O95136 353 aa6.03□□□□□ -1.44
COL28A1-202ENST00000430711 KRASP01116 189 aa6.03□□□□□ -1.44
COL28A1-202ENST00000430711 IFNA17P01571 189 aa6.03□□□□□ -1.44
COL28A1-202ENST00000430711 SERPINE2P07093 398 aa6.03□□□□□ -1.44
COL28A1-202ENST00000430711 RNF224P0DH78 156 aa6.03□□□□□ -1.44
COL28A1-202ENST00000430711 MPV17P39210 176 aa6.03□□□□□ -1.44
COL28A1-202ENST00000430711 IL24Q13007 206 aa6.03□□□□□ -1.44
COL28A1-202ENST00000430711 CLN3Q13286 438 aa6.03□□□□□ -1.44
COL28A1-202ENST00000430711 OR1C1Q15619 314 aa6.03□□□□□ -1.44
COL28A1-202ENST00000430711 SPRNQ5BIV9 151 aa6.03□□□□□ -1.44
COL28A1-202ENST00000430711 SCCPDHQ8NBX0 429 aa6.03□□□□□ -1.44
COL28A1-202ENST00000430711 LFNGQ8NES3 379 aa6.03□□□□□ -1.44
COL28A1-202ENST00000430711 OR51G1Q8NGK1 321 aa6.03□□□□□ -1.44
COL28A1-202ENST00000430711 RNASE11Q8TAA1 199 aaKnown RBP6.03□□□□□ -1.44
COL28A1-202ENST00000430711 TMEM45BQ96B21 275 aa6.03□□□□□ -1.44
COL28A1-202ENST00000430711 RPUSD4Q96CM3 377 aaKnown RBP6.03□□□□□ -1.44
COL28A1-202ENST00000430711 FAM210BQ96KR6 192 aa6.03□□□□□ -1.44
COL28A1-202ENST00000430711 NIPSNAP3BQ9BS92 247 aa6.03□□□□□ -1.44
COL28A1-202ENST00000430711 TMEM204Q9BSN7 226 aa6.03□□□□□ -1.44
COL28A1-202ENST00000430711 CABLES2Q9BTV7 478 aa6.03□□□□□ -1.44
COL28A1-202ENST00000430711 SLC25A31Q9H0C2 315 aa6.03□□□□□ -1.44
COL28A1-202ENST00000430711 SPRR3Q9UBC9 169 aa6.03□□□□□ -1.44
COL28A1-202ENST00000430711 ZG16O60844 167 aa6.02□□□□□ -1.45
COL28A1-202ENST00000430711 SERPINA7P05543 415 aa6.02□□□□□ -1.45
COL28A1-202ENST00000430711 SSTR5P35346 364 aa6.02□□□□□ -1.45
COL28A1-202ENST00000430711 APLNRP35414 380 aa6.02□□□□□ -1.45
COL28A1-202ENST00000430711 MDH2P40926 338 aaKnown RBP6.02□□□□□ -1.45
COL28A1-202ENST00000430711 SLC25A24Q6NUK1 477 aa6.02□□□□□ -1.45
COL28A1-202ENST00000430711 C16orf82Q7Z2V1 217 aa6.02□□□□□ -1.45
COL28A1-202ENST00000430711 LRP11Q86VZ4 500 aa6.02□□□□□ -1.45
COL28A1-202ENST00000430711 MKXQ8IYA7 352 aa6.02□□□□□ -1.45
COL28A1-202ENST00000430711 FAM185AQ8N0U4 392 aa6.02□□□□□ -1.45
COL28A1-202ENST00000430711 Q8N7P7 452 aa6.02□□□□□ -1.45
COL28A1-202ENST00000430711 ZNF114Q8NC26 417 aa6.02□□□□□ -1.45
COL28A1-202ENST00000430711 OR4X1Q8NH49 305 aa6.02□□□□□ -1.45
COL28A1-202ENST00000430711 GTF3AQ92664 365 aaKnown RBP6.02□□□□□ -1.45
COL28A1-202ENST00000430711 APOBEC3DQ96AK3 386 aaPredicted RBP6.02□□□□□ -1.45
COL28A1-202ENST00000430711 DERL1Q9BUN8 251 aa6.02□□□□□ -1.45
COL28A1-202ENST00000430711 SDF2L1Q9HCN8 221 aa6.02□□□□□ -1.45
COL28A1-202ENST00000430711 A0A087WWC5 75 aa6.02□□□□□ -1.45
COL28A1-202ENST00000430711 A0A1B0GV90 55 aa6.02□□□□□ -1.45
COL28A1-202ENST00000430711 MAP1LC3B2A6NCE7 125 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms