RNA–Protein interactions for RNA: ENST00000430335.1

CSNK1E-207, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5

Gene CSNK1E, Length 996 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-207ENST00000430335 DHRS7BQ6IAN0 325 aaPredicted RBP16.11■□□□□ 0.17
CSNK1E-207ENST00000430335 ZNF833PQ6ZTB9 187 aa16.11■□□□□ 0.17
CSNK1E-207ENST00000430335 DRAM1Q8N682 238 aa16.11■□□□□ 0.17
CSNK1E-207ENST00000430335 GVQW1Q8N7I0 195 aa16.11■□□□□ 0.17
CSNK1E-207ENST00000430335 BEST4Q8NFU0 473 aa16.11■□□□□ 0.17
CSNK1E-207ENST00000430335 GCDHQ92947 438 aaPredicted RBP16.11■□□□□ 0.17
CSNK1E-207ENST00000430335 NDUFA13Q9P0J0 144 aa16.11■□□□□ 0.17
CSNK1E-207ENST00000430335 ADAM30Q9UKF2 790 aa16.11■□□□□ 0.17
CSNK1E-207ENST00000430335 ANAPC10Q9UM13 185 aa16.11■□□□□ 0.17
CSNK1E-207ENST00000430335 MRPS7Q9Y2R9 242 aaKnown RBP16.11■□□□□ 0.17
CSNK1E-207ENST00000430335 SAA2-SAA4A0A096LPE2 208 aa16.1■□□□□ 0.17
CSNK1E-207ENST00000430335 RGS5O15539 181 aa16.1■□□□□ 0.17
CSNK1E-207ENST00000430335 FAM106CPP0CH98 169 aa16.1■□□□□ 0.17
CSNK1E-207ENST00000430335 SAA2P0DJI9 122 aaPredicted RBP16.1■□□□□ 0.17
CSNK1E-207ENST00000430335 COMPP49747 757 aaPredicted RBP16.1■□□□□ 0.17
CSNK1E-207ENST00000430335 C16orf82Q7Z2V1 217 aa16.1■□□□□ 0.17
CSNK1E-207ENST00000430335 H1FOOQ8IZA3 346 aaPredicted RBP16.1■□□□□ 0.17
CSNK1E-207ENST00000430335 OR56B4Q8NH76 319 aa16.1■□□□□ 0.17
CSNK1E-207ENST00000430335 CAPSLQ8WWF8 208 aa16.1■□□□□ 0.17
CSNK1E-207ENST00000430335 GINS4Q9BRT9 223 aa16.1■□□□□ 0.17
CSNK1E-207ENST00000430335 NXF2Q9GZY0 626 aaKnown RBP16.1■□□□□ 0.17
CSNK1E-207ENST00000430335 SCPEP1Q9HB40 452 aa16.1■□□□□ 0.17
CSNK1E-207ENST00000430335 EXTL2Q9UBQ6 330 aa16.1■□□□□ 0.17
CSNK1E-207ENST00000430335 SULT1C2O00338 296 aa16.09■□□□□ 0.17
CSNK1E-207ENST00000430335 CHST1O43916 411 aa16.09■□□□□ 0.17
CSNK1E-207ENST00000430335 CD24P25063 80 aa16.09■□□□□ 0.17
CSNK1E-207ENST00000430335 RELBQ01201 579 aa16.09■□□□□ 0.17
CSNK1E-207ENST00000430335 FOXL1Q12952 345 aa16.09■□□□□ 0.17
CSNK1E-207ENST00000430335 MOB3BQ86TA1 216 aa16.09■□□□□ 0.17
CSNK1E-207ENST00000430335 TMEM219Q86XT9 240 aa16.09■□□□□ 0.17
CSNK1E-207ENST00000430335 LAX1Q8IWV1 398 aa16.09■□□□□ 0.17
CSNK1E-207ENST00000430335 GPX8Q8TED1 209 aa16.09■□□□□ 0.17
CSNK1E-207ENST00000430335 ZNF251Q9BRH9 671 aa16.09■□□□□ 0.17
CSNK1E-207ENST00000430335 TSPAN9O75954 239 aa16.08■□□□□ 0.16
CSNK1E-207ENST00000430335 SNRNP70P08621 437 aaKnown RBP16.08■□□□□ 0.16
CSNK1E-207ENST00000430335 NAT1P18440 290 aa16.08■□□□□ 0.16
CSNK1E-207ENST00000430335 CD1BP29016 333 aa16.08■□□□□ 0.16
CSNK1E-207ENST00000430335 OR3A3P47888 321 aa16.08■□□□□ 0.16
CSNK1E-207ENST00000430335 EBI3Q14213 229 aa16.08■□□□□ 0.16
CSNK1E-207ENST00000430335 SNX29P2Q8IUI4 249 aa16.08■□□□□ 0.16
CSNK1E-207ENST00000430335 C15orf40Q8WUR7 153 aa16.08■□□□□ 0.16
CSNK1E-207ENST00000430335 SNAPC3Q92966 411 aa16.08■□□□□ 0.16
CSNK1E-207ENST00000430335 DGCR14Q96DF8 476 aaKnown RBP16.08■□□□□ 0.16
CSNK1E-207ENST00000430335 ABHD14BQ96IU4 210 aa16.08■□□□□ 0.16
CSNK1E-207ENST00000430335 S1PR3Q99500 378 aa16.08■□□□□ 0.16
CSNK1E-207ENST00000430335 RANBP3Q9H6Z4 567 aaPredicted RBP16.08■□□□□ 0.16
CSNK1E-207ENST00000430335 IFT46Q9NQC8 304 aa16.08■□□□□ 0.16
CSNK1E-207ENST00000430335 MEIS3P1A6NDR6 274 aa16.07■□□□□ 0.16
CSNK1E-207ENST00000430335 OR2F2O95006 317 aa16.07■□□□□ 0.16
CSNK1E-207ENST00000430335 RAG2P55895 527 aa16.07■□□□□ 0.16
CSNK1E-207ENST00000430335 ARPC4P59998 168 aa16.07■□□□□ 0.16
CSNK1E-207ENST00000430335 Q6ZSV7 163 aa16.07■□□□□ 0.16
CSNK1E-207ENST00000430335 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.07■□□□□ 0.16
CSNK1E-207ENST00000430335 OR4F5Q8NH21 305 aa16.07■□□□□ 0.16
CSNK1E-207ENST00000430335 MCFD2Q8NI22 146 aa16.07■□□□□ 0.16
CSNK1E-207ENST00000430335 AKR1E2Q96JD6 320 aa16.07■□□□□ 0.16
CSNK1E-207ENST00000430335 RBM14Q96PK6 669 aaKnown RBP16.07■□□□□ 0.16
CSNK1E-207ENST00000430335 NPFFR1Q9GZQ6 430 aa16.07■□□□□ 0.16
CSNK1E-207ENST00000430335 C6orf62Q9GZU0 229 aaPredicted RBP16.07■□□□□ 0.16
CSNK1E-207ENST00000430335 ZNF221Q9UK13 617 aa16.07■□□□□ 0.16
CSNK1E-207ENST00000430335 GAB2Q9UQC2 676 aa16.07■□□□□ 0.16
CSNK1E-207ENST00000430335 MMP24Q9Y5R2 645 aa16.07■□□□□ 0.16
CSNK1E-207ENST00000430335 DNHD1Q96M86 4753 aa16.07■□□□□ 0.16
CSNK1E-207ENST00000430335 A0A1B0GUS0 222 aa16.06■□□□□ 0.16
CSNK1E-207ENST00000430335 DPPA5A6NC42 116 aa16.06■□□□□ 0.16
CSNK1E-207ENST00000430335 OR8U9P0C7N5 309 aa16.06■□□□□ 0.16
CSNK1E-207ENST00000430335 GPR12P47775 334 aa16.06■□□□□ 0.16
CSNK1E-207ENST00000430335 LSAMPQ13449 338 aa16.06■□□□□ 0.16
CSNK1E-207ENST00000430335 FBLN7Q53RD9 439 aa16.06■□□□□ 0.16
CSNK1E-207ENST00000430335 RPL39P5Q59GN2 51 aa16.06■□□□□ 0.16
CSNK1E-207ENST00000430335 OR5AP2Q8NGF4 316 aa16.06■□□□□ 0.16
CSNK1E-207ENST00000430335 OR8U1Q8NH10 309 aa16.06■□□□□ 0.16
CSNK1E-207ENST00000430335 SPATA3Q8NHX4 192 aa16.06■□□□□ 0.16
CSNK1E-207ENST00000430335 TAF15Q92804 592 aaKnown RBP eCLIP16.06■□□□□ 0.16
CSNK1E-207ENST00000430335 NABP2Q9BQ15 211 aa16.06■□□□□ 0.16
CSNK1E-207ENST00000430335 SLC25A33Q9BSK2 321 aa16.06■□□□□ 0.16
CSNK1E-207ENST00000430335 DCUN1D5Q9BTE7 237 aa16.06■□□□□ 0.16
CSNK1E-207ENST00000430335 MRPL20Q9BYC9 149 aaKnown RBP16.06■□□□□ 0.16
CSNK1E-207ENST00000430335 C16orf95Q9H693 158 aa16.06■□□□□ 0.16
CSNK1E-207ENST00000430335 RABL2AQ9UBK7 228 aaPredicted RBP16.06■□□□□ 0.16
CSNK1E-207ENST00000430335 RNF150Q9ULK6 438 aa16.06■□□□□ 0.16
CSNK1E-207ENST00000430335 RABL2BQ9UNT1 228 aa16.06■□□□□ 0.16
CSNK1E-207ENST00000430335 A3GALT2U3KPV4 340 aa16.06■□□□□ 0.16
CSNK1E-207ENST00000430335 IGHV3-72A0A0B4J1Y9 119 aa16.05■□□□□ 0.16
CSNK1E-207ENST00000430335 TUSC2O75896 110 aa16.05■□□□□ 0.16
CSNK1E-207ENST00000430335 IGKV1D-33P01593 117 aa16.05■□□□□ 0.16
CSNK1E-207ENST00000430335 IGKV1-33P01594 117 aa16.05■□□□□ 0.16
CSNK1E-207ENST00000430335 AWAT1Q58HT5 328 aa16.05■□□□□ 0.16
CSNK1E-207ENST00000430335 OR2T10Q8NGZ9 312 aa16.05■□□□□ 0.16
CSNK1E-207ENST00000430335 BEX1Q9HBH7 125 aa16.05■□□□□ 0.16
CSNK1E-207ENST00000430335 NECAP2Q9NVZ3 263 aa16.05■□□□□ 0.16
CSNK1E-207ENST00000430335 OR2W1Q9Y3N9 320 aa16.05■□□□□ 0.16
CSNK1E-207ENST00000430335 M0QZK8 103 aa16.04■□□□□ 0.16
CSNK1E-207ENST00000430335 PROP1O75360 226 aa16.04■□□□□ 0.16
CSNK1E-207ENST00000430335 TMEM11P17152 192 aa16.04■□□□□ 0.16
CSNK1E-207ENST00000430335 NFYAP23511 347 aaPredicted RBP16.04■□□□□ 0.16
CSNK1E-207ENST00000430335 HES1Q14469 280 aa16.04■□□□□ 0.16
CSNK1E-207ENST00000430335 CDK10Q15131 360 aa16.04■□□□□ 0.16
CSNK1E-207ENST00000430335 Q8N6K4 173 aa16.04■□□□□ 0.16
CSNK1E-207ENST00000430335 OR4C13Q8NGP0 309 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms