RNA–Protein interactions for RNA: ENST00000430118.1

HMGB3-203, Transcript of high mobility group box 3, humanhuman

TSL 1 (best)

Gene HMGB3, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-203ENST00000430118 PIPP12273 146 aaPredicted RBP3.14□□□□□ -1.91
HMGB3-203ENST00000430118 GTF2F2P13984 249 aa3.14□□□□□ -1.91
HMGB3-203ENST00000430118 NQO2P16083 231 aa3.14□□□□□ -1.91
HMGB3-203ENST00000430118 GGT1P19440 569 aa3.14□□□□□ -1.91
HMGB3-203ENST00000430118 CXCL2P19875 107 aa3.14□□□□□ -1.91
HMGB3-203ENST00000430118 RAB5AP20339 215 aa3.14□□□□□ -1.91
HMGB3-203ENST00000430118 SLC2A5P22732 501 aa3.14□□□□□ -1.91
HMGB3-203ENST00000430118 LEPP41159 167 aa3.14□□□□□ -1.91
HMGB3-203ENST00000430118 PTGDSP41222 190 aa3.14□□□□□ -1.91
HMGB3-203ENST00000430118 MAP2K4P45985 399 aa3.14□□□□□ -1.91
HMGB3-203ENST00000430118 RPL29P47914 159 aaKnown RBP3.14□□□□□ -1.91
HMGB3-203ENST00000430118 CYB561P49447 251 aa3.14□□□□□ -1.91
HMGB3-203ENST00000430118 RAB9AP51151 201 aa3.14□□□□□ -1.91
HMGB3-203ENST00000430118 CLDN18P56856 261 aa3.14□□□□□ -1.91
HMGB3-203ENST00000430118 TMEM33P57088 247 aa3.14□□□□□ -1.91
HMGB3-203ENST00000430118 RGS8P57771 180 aaPredicted RBP3.14□□□□□ -1.91
HMGB3-203ENST00000430118 OR2B8PP59922 312 aa3.14□□□□□ -1.91
HMGB3-203ENST00000430118 LMO4P61968 165 aa3.14□□□□□ -1.91
HMGB3-203ENST00000430118 RPL19P84098 196 aaKnown RBP3.14□□□□□ -1.91
HMGB3-203ENST00000430118 TGM3Q08188 693 aa3.14□□□□□ -1.91
HMGB3-203ENST00000430118 TAF9Q16594 264 aa3.14□□□□□ -1.91
HMGB3-203ENST00000430118 PYDC2Q56P42 97 aa3.14□□□□□ -1.91
HMGB3-203ENST00000430118 TMEM255AQ5JRV8 349 aa3.14□□□□□ -1.91
HMGB3-203ENST00000430118 NCMAPQ5T1S8 102 aa3.14□□□□□ -1.91
HMGB3-203ENST00000430118 AKR1C8PQ5T2L2 129 aa3.14□□□□□ -1.91
HMGB3-203ENST00000430118 IDNKQ5T6J7 187 aa3.14□□□□□ -1.91
HMGB3-203ENST00000430118 RNLSQ5VYX0 342 aa3.14□□□□□ -1.91
HMGB3-203ENST00000430118 SLC22A10Q63ZE4 541 aa3.14□□□□□ -1.91
HMGB3-203ENST00000430118 ZNF660Q6AZW8 331 aaPredicted RBP3.14□□□□□ -1.91
HMGB3-203ENST00000430118 OR52W1Q6IF63 320 aa3.14□□□□□ -1.91
HMGB3-203ENST00000430118 TMEM220Q6QAJ8 160 aa3.14□□□□□ -1.91
HMGB3-203ENST00000430118 C2orf66Q6UXQ4 117 aa3.14□□□□□ -1.91
HMGB3-203ENST00000430118 ZCCHC23Q6ZST2 131 aa3.14□□□□□ -1.91
HMGB3-203ENST00000430118 RFLNAQ6ZTI6 216 aa3.14□□□□□ -1.91
HMGB3-203ENST00000430118 HIST2H3AQ71DI3 136 aa3.14□□□□□ -1.91
HMGB3-203ENST00000430118 LYG2Q86SG7 212 aa3.14□□□□□ -1.91
HMGB3-203ENST00000430118 LINC01551Q86U37 167 aa3.14□□□□□ -1.91
HMGB3-203ENST00000430118 Q8N402 240 aa3.14□□□□□ -1.91
HMGB3-203ENST00000430118 COMMD1Q8N668 190 aa3.14□□□□□ -1.91
HMGB3-203ENST00000430118 NPWQ8N729 165 aa3.14□□□□□ -1.91
HMGB3-203ENST00000430118 MDS2Q8NDY4 140 aa3.14□□□□□ -1.91
HMGB3-203ENST00000430118 OR10K1Q8NGX5 313 aa3.14□□□□□ -1.91
HMGB3-203ENST00000430118 OR56B4Q8NH76 319 aa3.14□□□□□ -1.91
HMGB3-203ENST00000430118 COQ8AQ8NI60 647 aa3.14□□□□□ -1.91
HMGB3-203ENST00000430118 JOSD2Q8TAC2 188 aa3.14□□□□□ -1.91
HMGB3-203ENST00000430118 ZNF675Q8TD23 568 aa3.14□□□□□ -1.91
HMGB3-203ENST00000430118 TMEM234Q8WY98 164 aa3.14□□□□□ -1.91
HMGB3-203ENST00000430118 RNASE6Q93091 150 aaKnown RBP3.14□□□□□ -1.91
HMGB3-203ENST00000430118 ARL11Q969Q4 196 aa3.14□□□□□ -1.91
HMGB3-203ENST00000430118 MRGPRFQ96AM1 343 aa3.14□□□□□ -1.91
HMGB3-203ENST00000430118 C8orf44Q96CB5 159 aa3.14□□□□□ -1.91
HMGB3-203ENST00000430118 TM4SF19Q96DZ7 209 aa3.14□□□□□ -1.91
HMGB3-203ENST00000430118 TIMD4Q96H15 378 aa3.14□□□□□ -1.91
HMGB3-203ENST00000430118 SULT4A1Q9BR01 284 aa3.14□□□□□ -1.91
HMGB3-203ENST00000430118 C19orf24Q9BVV8 132 aa3.14□□□□□ -1.91
HMGB3-203ENST00000430118 CDCA4Q9BXL8 241 aa3.14□□□□□ -1.91
HMGB3-203ENST00000430118 ABCG5Q9H222 651 aa3.14□□□□□ -1.91
HMGB3-203ENST00000430118 SYT4Q9H2B2 425 aa3.14□□□□□ -1.91
HMGB3-203ENST00000430118 TMEM185BQ9H7F4 350 aa3.14□□□□□ -1.91
HMGB3-203ENST00000430118 LRTM1Q9HBL6 345 aa3.14□□□□□ -1.91
HMGB3-203ENST00000430118 DKKL1Q9UK85 242 aa3.14□□□□□ -1.91
HMGB3-203ENST00000430118 PITPNC1Q9UKF7 332 aa3.14□□□□□ -1.91
HMGB3-203ENST00000430118 SLC22A13Q9Y226 551 aa3.14□□□□□ -1.91
HMGB3-203ENST00000430118 MOB4Q9Y3A3 225 aa3.14□□□□□ -1.91
HMGB3-203ENST00000430118 WIF1Q9Y5W5 379 aa3.14□□□□□ -1.91
HMGB3-203ENST00000430118 FLVCR1Q9Y5Y0 555 aa3.14□□□□□ -1.91
HMGB3-203ENST00000430118 KPTNQ9Y664 436 aa3.14□□□□□ -1.91
HMGB3-203ENST00000430118 MXRA5Q9NR99 2828 aa3.14□□□□□ -1.91
HMGB3-203ENST00000430118 IGLV3-12A0A075B6K2 115 aa3.13□□□□□ -1.91
HMGB3-203ENST00000430118 TRAV39A0A0B4J263 110 aa3.13□□□□□ -1.91
HMGB3-203ENST00000430118 A0A0D9SG52 128 aa3.13□□□□□ -1.91
HMGB3-203ENST00000430118 A0A1W2PPV9 198 aa3.13□□□□□ -1.91
HMGB3-203ENST00000430118 C20orf202A1L168 122 aa3.13□□□□□ -1.91
HMGB3-203ENST00000430118 SMCO3A2RU48 225 aa3.13□□□□□ -1.91
HMGB3-203ENST00000430118 GJE1A6NN92 205 aa3.13□□□□□ -1.91
HMGB3-203ENST00000430118 DHRS7CA6NNS2 312 aa3.13□□□□□ -1.91
HMGB3-203ENST00000430118 SNRPGP15A8MWD9 76 aa3.13□□□□□ -1.91
HMGB3-203ENST00000430118 MFNGO00587 321 aa3.13□□□□□ -1.91
HMGB3-203ENST00000430118 UBFD1O14562 309 aaKnown RBP3.13□□□□□ -1.91
HMGB3-203ENST00000430118 PPP1R2P9O14990 202 aa3.13□□□□□ -1.91
HMGB3-203ENST00000430118 FGF16O43320 207 aa3.13□□□□□ -1.91
HMGB3-203ENST00000430118 EIF4E2O60573 245 aaKnown RBP3.13□□□□□ -1.91
HMGB3-203ENST00000430118 CA11O75493 328 aa3.13□□□□□ -1.91
HMGB3-203ENST00000430118 PROSCO94903 275 aa3.13□□□□□ -1.91
HMGB3-203ENST00000430118 TMEM50AO95807 157 aa3.13□□□□□ -1.91
HMGB3-203ENST00000430118 STAG3L2P0CL84 134 aa3.13□□□□□ -1.91
HMGB3-203ENST00000430118 MSR1P21757 451 aa3.13□□□□□ -1.91
HMGB3-203ENST00000430118 MT3P25713 68 aa3.13□□□□□ -1.91
HMGB3-203ENST00000430118 AGTR1P30556 359 aa3.13□□□□□ -1.91
HMGB3-203ENST00000430118 BTCP35070 178 aa3.13□□□□□ -1.91
HMGB3-203ENST00000430118 TGFBR1P36897 503 aa3.13□□□□□ -1.91
HMGB3-203ENST00000430118 INPP1P49441 399 aa3.13□□□□□ -1.91
HMGB3-203ENST00000430118 OR10A3P58181 314 aa3.13□□□□□ -1.91
HMGB3-203ENST00000430118 VSX2P58304 361 aaPredicted RBP3.13□□□□□ -1.91
HMGB3-203ENST00000430118 STXBP1P61764 594 aaKnown RBP3.13□□□□□ -1.91
HMGB3-203ENST00000430118 CDK6Q00534 326 aa3.13□□□□□ -1.91
HMGB3-203ENST00000430118 PLGLB1Q02325 96 aa3.13□□□□□ -1.91
HMGB3-203ENST00000430118 MADCAM1Q13477 382 aa3.13□□□□□ -1.91
HMGB3-203ENST00000430118 TPBGQ13641 420 aa3.13□□□□□ -1.91
HMGB3-203ENST00000430118 ARL6IP1Q15041 203 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms