RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 BOD1Q96IK1 185 aa6.9□□□□□ -1.3
HPS4-205ENST00000429411 TMEM222Q9H0R3 208 aa6.9□□□□□ -1.3
HPS4-205ENST00000429411 RPL36A-HNRNPH2H7BZ11 118 aa6.9□□□□□ -1.31
HPS4-205ENST00000429411 CDIPTO14735 213 aa6.9□□□□□ -1.31
HPS4-205ENST00000429411 RHBDL1O75783 438 aa6.9□□□□□ -1.31
HPS4-205ENST00000429411 TGFAP01135 160 aa6.9□□□□□ -1.31
HPS4-205ENST00000429411 VDAC1P21796 283 aa6.9□□□□□ -1.31
HPS4-205ENST00000429411 BAXQ07812 192 aa6.9□□□□□ -1.31
HPS4-205ENST00000429411 OR1C1Q15619 314 aa6.9□□□□□ -1.31
HPS4-205ENST00000429411 HIST3H3Q16695 136 aa6.9□□□□□ -1.31
HPS4-205ENST00000429411 BTNL3Q6UXE8 466 aa6.9□□□□□ -1.31
HPS4-205ENST00000429411 FAM58AQ8N1B3 248 aa6.9□□□□□ -1.31
HPS4-205ENST00000429411 OR10V1Q8NGI7 309 aa6.9□□□□□ -1.31
HPS4-205ENST00000429411 MSI2Q96DH6 328 aaKnown RBP6.9□□□□□ -1.31
HPS4-205ENST00000429411 PRO1933Q9H354 126 aa6.9□□□□□ -1.31
HPS4-205ENST00000429411 TMPRSS5Q9H3S3 457 aa6.9□□□□□ -1.31
HPS4-205ENST00000429411 SLC25A22Q9H936 323 aa6.9□□□□□ -1.31
HPS4-205ENST00000429411 KCNIP1Q9NZI2 227 aa6.9□□□□□ -1.31
HPS4-205ENST00000429411 HSF4Q9ULV5 492 aa6.9□□□□□ -1.31
HPS4-205ENST00000429411 LRP4O75096 1905 aa6.89□□□□□ -1.31
HPS4-205ENST00000429411 TGIF2-C20orf24A0A0A6YYL0 155 aa6.89□□□□□ -1.31
HPS4-205ENST00000429411 SLC22A20A6NK97 555 aa6.89□□□□□ -1.31
HPS4-205ENST00000429411 PPP1R2P9O14990 202 aa6.89□□□□□ -1.31
HPS4-205ENST00000429411 LYZL6O75951 148 aa6.89□□□□□ -1.31
HPS4-205ENST00000429411 TFF1P04155 84 aa6.89□□□□□ -1.31
HPS4-205ENST00000429411 CD5P06127 495 aa6.89□□□□□ -1.31
HPS4-205ENST00000429411 FGF5P12034 268 aa6.89□□□□□ -1.31
HPS4-205ENST00000429411 FABP4P15090 132 aa6.89□□□□□ -1.31
HPS4-205ENST00000429411 NDUFB7P17568 137 aa6.89□□□□□ -1.31
HPS4-205ENST00000429411 RAB5CP51148 216 aa6.89□□□□□ -1.31
HPS4-205ENST00000429411 FABP6P51161 128 aa6.89□□□□□ -1.31
HPS4-205ENST00000429411 HOXA4Q00056 320 aaPredicted RBP6.89□□□□□ -1.31
HPS4-205ENST00000429411 CST9LP1Q5W188 147 aa6.89□□□□□ -1.31
HPS4-205ENST00000429411 M1APQ8TC57 530 aa6.89□□□□□ -1.31
HPS4-205ENST00000429411 APOBEC3DQ96AK3 386 aaPredicted RBP6.89□□□□□ -1.31
HPS4-205ENST00000429411 GNPNAT1Q96EK6 184 aaPredicted RBP6.89□□□□□ -1.31
HPS4-205ENST00000429411 WDR54Q9H977 334 aa6.89□□□□□ -1.31
HPS4-205ENST00000429411 HIF1ANQ9NWT6 349 aa6.89□□□□□ -1.31
HPS4-205ENST00000429411 CRIM1Q9NZV1 1036 aa6.89□□□□□ -1.31
HPS4-205ENST00000429411 TUBD1Q9UJT1 453 aa6.89□□□□□ -1.31
HPS4-205ENST00000429411 AP4M1O00189 453 aa6.89□□□□□ -1.31
HPS4-205ENST00000429411 CEACAM6P40199 344 aa6.89□□□□□ -1.31
HPS4-205ENST00000429411 SRSF6Q13247 344 aaKnown RBP6.89□□□□□ -1.31
HPS4-205ENST00000429411 TMEM211Q6ICI0 200 aa6.89□□□□□ -1.31
HPS4-205ENST00000429411 FRZBQ92765 325 aa6.89□□□□□ -1.31
HPS4-205ENST00000429411 ADGRG7Q96K78 797 aa6.89□□□□□ -1.31
HPS4-205ENST00000429411 SIGLEC12Q96PQ1 595 aa6.89□□□□□ -1.31
HPS4-205ENST00000429411 TOLLIPQ9H0E2 274 aa6.89□□□□□ -1.31
HPS4-205ENST00000429411 MTCH1Q9NZJ7 389 aa6.89□□□□□ -1.31
HPS4-205ENST00000429411 PRSS50Q9UI38 385 aa6.89□□□□□ -1.31
HPS4-205ENST00000429411 NBEAQ8NFP9 2946 aa6.89□□□□□ -1.31
HPS4-205ENST00000429411 LILRA1O75019 489 aa6.89□□□□□ -1.31
HPS4-205ENST00000429411 TRGC2P03986 189 aa6.89□□□□□ -1.31
HPS4-205ENST00000429411 CRYGSP22914 178 aa6.89□□□□□ -1.31
HPS4-205ENST00000429411 ATP1A1-AS1Q5TC04 95 aa6.89□□□□□ -1.31
HPS4-205ENST00000429411 TMEM171Q8WVE6 324 aa6.89□□□□□ -1.31
HPS4-205ENST00000429411 C10orf35Q96D05 121 aa6.89□□□□□ -1.31
HPS4-205ENST00000429411 TVP23CQ96ET8 276 aa6.89□□□□□ -1.31
HPS4-205ENST00000429411 CABLES2Q9BTV7 478 aa6.89□□□□□ -1.31
HPS4-205ENST00000429411 DUSP13Q9UII6 198 aa6.89□□□□□ -1.31
HPS4-205ENST00000429411 IGLV3-32A0A0A0MS00 114 aa6.88□□□□□ -1.31
HPS4-205ENST00000429411 CLEC18AA5D8T8 446 aa6.88□□□□□ -1.31
HPS4-205ENST00000429411 ZNF716A6NP11 495 aa6.88□□□□□ -1.31
HPS4-205ENST00000429411 CDS2O95674 445 aa6.88□□□□□ -1.31
HPS4-205ENST00000429411 HBE1P02100 147 aa6.88□□□□□ -1.31
HPS4-205ENST00000429411 CD200P41217 278 aa6.88□□□□□ -1.31
HPS4-205ENST00000429411 WDR25Q64LD2 544 aaPredicted RBP6.88□□□□□ -1.31
HPS4-205ENST00000429411 PPP1R32Q7Z5V6 425 aa6.88□□□□□ -1.31
HPS4-205ENST00000429411 CLEC18CQ8NCF0 446 aa6.88□□□□□ -1.31
HPS4-205ENST00000429411 DMBX1Q8NFW5 382 aa6.88□□□□□ -1.31
HPS4-205ENST00000429411 SNX22Q96L94 193 aa6.88□□□□□ -1.31
HPS4-205ENST00000429411 SMIM7Q9BQ49 75 aa6.88□□□□□ -1.31
HPS4-205ENST00000429411 VCX2Q9H322 139 aa6.88□□□□□ -1.31
HPS4-205ENST00000429411 PROK2Q9HC23 129 aa6.88□□□□□ -1.31
HPS4-205ENST00000429411 A0A1W2PPQ1 181 aa6.88□□□□□ -1.31
HPS4-205ENST00000429411 CBY3A6NI87 242 aa6.88□□□□□ -1.31
HPS4-205ENST00000429411 DFFBO76075 338 aa6.88□□□□□ -1.31
HPS4-205ENST00000429411 HBG1P69891 147 aa6.88□□□□□ -1.31
HPS4-205ENST00000429411 HBG2P69892 147 aa6.88□□□□□ -1.31
HPS4-205ENST00000429411 ZNF826PQ6ZT77 177 aa6.88□□□□□ -1.31
HPS4-205ENST00000429411 MOGAT3Q86VF5 341 aa6.88□□□□□ -1.31
HPS4-205ENST00000429411 ZNF573Q86YE8 665 aa6.88□□□□□ -1.31
HPS4-205ENST00000429411 HPSE2Q8WWQ2 592 aa6.88□□□□□ -1.31
HPS4-205ENST00000429411 GPR146Q96CH1 333 aa6.88□□□□□ -1.31
HPS4-205ENST00000429411 GALNT14Q96FL9 552 aa6.88□□□□□ -1.31
HPS4-205ENST00000429411 OR5B12Q96R08 314 aa6.88□□□□□ -1.31
HPS4-205ENST00000429411 ZDHHC8Q9ULC8 765 aa6.88□□□□□ -1.31
HPS4-205ENST00000429411 PGLYRP1O75594 196 aaPredicted RBP6.88□□□□□ -1.31
HPS4-205ENST00000429411 DEFA4P12838 97 aa6.88□□□□□ -1.31
HPS4-205ENST00000429411 F2RP25116 425 aa6.88□□□□□ -1.31
HPS4-205ENST00000429411 OR3A1P47881 315 aa6.88□□□□□ -1.31
HPS4-205ENST00000429411 RPS23P62266 143 aaKnown RBP6.88□□□□□ -1.31
HPS4-205ENST00000429411 GNG3P63215 75 aa6.88□□□□□ -1.31
HPS4-205ENST00000429411 UNQ6494/PRO21346Q6UXR6 183 aa6.88□□□□□ -1.31
HPS4-205ENST00000429411 COMMD1Q8N668 190 aa6.88□□□□□ -1.31
HPS4-205ENST00000429411 ZNF610Q8N9Z0 462 aa6.88□□□□□ -1.31
HPS4-205ENST00000429411 OR4F5Q8NH21 305 aa6.88□□□□□ -1.31
HPS4-205ENST00000429411 EDARADDQ8WWZ3 215 aa6.88□□□□□ -1.31
HPS4-205ENST00000429411 RNF125Q96EQ8 232 aa6.88□□□□□ -1.31
HPS4-205ENST00000429411 OR4F4Q96R69 305 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms