RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 ERGIC3Q9Y282 383 aa12.04□□□□□ -0.48
SEC13-210ENST00000428626 TRAV41A0A0B4J266 112 aa12.03□□□□□ -0.48
SEC13-210ENST00000428626 SLC22A1O15245 554 aa12.03□□□□□ -0.48
SEC13-210ENST00000428626 PROP1O75360 226 aa12.03□□□□□ -0.48
SEC13-210ENST00000428626 UBBP0CG47 229 aa12.03□□□□□ -0.48
SEC13-210ENST00000428626 EGR2P11161 476 aaPredicted RBP12.03□□□□□ -0.48
SEC13-210ENST00000428626 RAB9AP51151 201 aa12.03□□□□□ -0.48
SEC13-210ENST00000428626 RBM48Q5RL73 367 aaKnown RBP12.03□□□□□ -0.48
SEC13-210ENST00000428626 RNLSQ5VYX0 342 aa12.03□□□□□ -0.48
SEC13-210ENST00000428626 LIN54Q6MZP7 749 aa12.03□□□□□ -0.48
SEC13-210ENST00000428626 OR2AK2Q8NG84 335 aa12.03□□□□□ -0.48
SEC13-210ENST00000428626 OR1N2Q8NGR9 330 aa12.03□□□□□ -0.48
SEC13-210ENST00000428626 PHYHIPQ92561 330 aa12.03□□□□□ -0.48
SEC13-210ENST00000428626 ABHD14BQ96IU4 210 aa12.03□□□□□ -0.48
SEC13-210ENST00000428626 CHCHD6Q9BRQ6 235 aa12.03□□□□□ -0.48
SEC13-210ENST00000428626 AGMATQ9BSE5 352 aa12.03□□□□□ -0.48
SEC13-210ENST00000428626 FBXL15Q9H469 300 aa12.03□□□□□ -0.48
SEC13-210ENST00000428626 ZMAT5Q9UDW3 170 aaKnown RBP12.03□□□□□ -0.48
SEC13-210ENST00000428626 VSIG4Q9Y279 399 aa12.03□□□□□ -0.48
SEC13-210ENST00000428626 FOXI3A8MTJ6 420 aaPredicted RBP12.02□□□□□ -0.49
SEC13-210ENST00000428626 PTGES3LE9PB15 166 aa12.02□□□□□ -0.49
SEC13-210ENST00000428626 SOCS1O15524 211 aa12.02□□□□□ -0.49
SEC13-210ENST00000428626 RGS11O94810 467 aa12.02□□□□□ -0.49
SEC13-210ENST00000428626 UCHL1P09936 223 aa12.02□□□□□ -0.49
SEC13-210ENST00000428626 SRMP19623 302 aa12.02□□□□□ -0.49
SEC13-210ENST00000428626 LINC00205P59089 165 aa12.02□□□□□ -0.49
SEC13-210ENST00000428626 ZNF616Q08AN1 781 aa12.02□□□□□ -0.49
SEC13-210ENST00000428626 DCTN2Q13561 401 aaKnown RBP12.02□□□□□ -0.49
SEC13-210ENST00000428626 IRF3Q14653 427 aa12.02□□□□□ -0.49
SEC13-210ENST00000428626 GLT8D1Q68CQ7 371 aa12.02□□□□□ -0.49
SEC13-210ENST00000428626 CEACAM19Q7Z692 300 aa12.02□□□□□ -0.49
SEC13-210ENST00000428626 MS4A15Q8N5U1 240 aa12.02□□□□□ -0.49
SEC13-210ENST00000428626 DCUN1D4Q92564 292 aa12.02□□□□□ -0.49
SEC13-210ENST00000428626 THRSPQ92748 146 aa12.02□□□□□ -0.49
SEC13-210ENST00000428626 MND1Q9BWT6 205 aa12.02□□□□□ -0.49
SEC13-210ENST00000428626 LPAR5Q9H1C0 372 aa12.02□□□□□ -0.49
SEC13-210ENST00000428626 TPSG1Q9NRR2 321 aa12.02□□□□□ -0.49
SEC13-210ENST00000428626 OR1A1Q9P1Q5 309 aa12.02□□□□□ -0.49
SEC13-210ENST00000428626 SLC23A1Q9UHI7 598 aa12.02□□□□□ -0.49
SEC13-210ENST00000428626 GAB2Q9UQC2 676 aa12.02□□□□□ -0.49
SEC13-210ENST00000428626 ZNF256Q9Y2P7 627 aaPredicted RBP12.02□□□□□ -0.49
SEC13-210ENST00000428626 ANKRD65E5RJM6 399 aa12.01□□□□□ -0.49
SEC13-210ENST00000428626 H0YJW9 148 aa12.01□□□□□ -0.49
SEC13-210ENST00000428626 CRIP2P52943 208 aaPredicted RBP12.01□□□□□ -0.49
SEC13-210ENST00000428626 CX3CL1P78423 397 aa12.01□□□□□ -0.49
SEC13-210ENST00000428626 SPHARQ15513 63 aa12.01□□□□□ -0.49
SEC13-210ENST00000428626 ECSCRQ19T08 205 aa12.01□□□□□ -0.49
SEC13-210ENST00000428626 HSD17B12Q53GQ0 312 aa12.01□□□□□ -0.49
SEC13-210ENST00000428626 TMEM65Q6PI78 240 aa12.01□□□□□ -0.49
SEC13-210ENST00000428626 TMEM91Q6ZNR0 172 aa12.01□□□□□ -0.49
SEC13-210ENST00000428626 KCNG3Q8TAE7 436 aa12.01□□□□□ -0.49
SEC13-210ENST00000428626 TMEM203Q969S6 136 aa12.01□□□□□ -0.49
SEC13-210ENST00000428626 AK3Q9UIJ7 227 aa12.01□□□□□ -0.49
SEC13-210ENST00000428626 LRRC42Q9Y546 428 aa12.01□□□□□ -0.49
SEC13-210ENST00000428626 U3KQK5 164 aa12.01□□□□□ -0.49
SEC13-210ENST00000428626 DNAH7Q8WXX0 4024 aa12.01□□□□□ -0.49
SEC13-210ENST00000428626 TRBV6-6A0A0A6YYG2 114 aa12□□□□□ -0.49
SEC13-210ENST00000428626 RRHO14718 337 aa12□□□□□ -0.49
SEC13-210ENST00000428626 RAB29O14966 203 aa12□□□□□ -0.49
SEC13-210ENST00000428626 OR8U8P0C7N1 319 aa12□□□□□ -0.49
SEC13-210ENST00000428626 NHLRC4P0CG21 123 aaPredicted RBP12□□□□□ -0.49
SEC13-210ENST00000428626 SLURP1P55000 103 aa12□□□□□ -0.49
SEC13-210ENST00000428626 TMEM50BP56557 158 aa12□□□□□ -0.49
SEC13-210ENST00000428626 P2RY14Q15391 338 aa12□□□□□ -0.49
SEC13-210ENST00000428626 LIPKQ5VXJ0 399 aa12□□□□□ -0.49
SEC13-210ENST00000428626 FAM71F2Q6NXP2 309 aa12□□□□□ -0.49
SEC13-210ENST00000428626 OR5AN1Q8NGI8 311 aa12□□□□□ -0.49
SEC13-210ENST00000428626 SETD6Q8TBK2 473 aa12□□□□□ -0.49
SEC13-210ENST00000428626 DLX4Q92988 240 aaPredicted RBP12□□□□□ -0.49
SEC13-210ENST00000428626 FAM103A1Q9BTL3 118 aaKnown RBP12□□□□□ -0.49
SEC13-210ENST00000428626 C11orf54Q9H0W9 315 aaPredicted RBP12□□□□□ -0.49
SEC13-210ENST00000428626 CHMP1AQ9HD42 196 aaPredicted RBP12□□□□□ -0.49
SEC13-210ENST00000428626 PLEKHJ1Q9NW61 149 aa12□□□□□ -0.49
SEC13-210ENST00000428626 ABRACLQ9P1F3 81 aa12□□□□□ -0.49
SEC13-210ENST00000428626 NKX1-2Q9UD57 310 aaPredicted RBP12□□□□□ -0.49
SEC13-210ENST00000428626 STEAP1Q9UHE8 339 aa12□□□□□ -0.49
SEC13-210ENST00000428626 NUBP2Q9Y5Y2 271 aa12□□□□□ -0.49
SEC13-210ENST00000428626 A3GALT2U3KPV4 340 aa12□□□□□ -0.49
SEC13-210ENST00000428626 IGHV4OR15-8A0A075B7B6 117 aa11.99□□□□□ -0.49
SEC13-210ENST00000428626 A0A087WW49 117 aa11.99□□□□□ -0.49
SEC13-210ENST00000428626 IGKV1-6A0A0C4DH72 117 aa11.99□□□□□ -0.49
SEC13-210ENST00000428626 A0A1W2PN81 502 aa11.99□□□□□ -0.49
SEC13-210ENST00000428626 BPNT1O95861 308 aa11.99□□□□□ -0.49
SEC13-210ENST00000428626 SCTP09683 121 aa11.99□□□□□ -0.49
SEC13-210ENST00000428626 CHRNA7P36544 502 aa11.99□□□□□ -0.49
SEC13-210ENST00000428626 RPS25P62851 125 aaKnown RBP11.99□□□□□ -0.49
SEC13-210ENST00000428626 PLA2G7Q13093 441 aa11.99□□□□□ -0.49
SEC13-210ENST00000428626 MED22Q15528 200 aa11.99□□□□□ -0.49
SEC13-210ENST00000428626 FAM89BQ8N5H3 189 aa11.99□□□□□ -0.49
SEC13-210ENST00000428626 DRAXINQ8NBI3 349 aaPredicted RBP11.99□□□□□ -0.49
SEC13-210ENST00000428626 OR6M1Q8NGM8 313 aa11.99□□□□□ -0.49
SEC13-210ENST00000428626 TOLLIPQ9H0E2 274 aa11.99□□□□□ -0.49
SEC13-210ENST00000428626 ISYNA1Q9NPH2 558 aa11.99□□□□□ -0.49
SEC13-210ENST00000428626 PIPOXQ9P0Z9 390 aa11.99□□□□□ -0.49
SEC13-210ENST00000428626 KIAA1456Q9P272 454 aa11.99□□□□□ -0.49
SEC13-210ENST00000428626 RNF150Q9ULK6 438 aa11.99□□□□□ -0.49
SEC13-210ENST00000428626 AK6Q9Y3D8 172 aaKnown RBP11.99□□□□□ -0.49
SEC13-210ENST00000428626 ITGB1BP1O14713 200 aa11.98□□□□□ -0.49
SEC13-210ENST00000428626 CLDN12P56749 244 aa11.98□□□□□ -0.49
SEC13-210ENST00000428626 HLA-DRB3P79483 266 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms