RNA–Protein interactions for RNA: ENST00000428574.6

NR1I3-209, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-209ENST00000428574 ARHGDIBP52566 201 aa7.47□□□□□ -1.21
NR1I3-209ENST00000428574 ZNF137PP52743 207 aa7.47□□□□□ -1.21
NR1I3-209ENST00000428574 ZNF273Q14593 569 aa7.47□□□□□ -1.21
NR1I3-209ENST00000428574 GNMTQ14749 295 aa7.47□□□□□ -1.21
NR1I3-209ENST00000428574 SLC9A3R2Q15599 337 aa7.47□□□□□ -1.21
NR1I3-209ENST00000428574 PHLDA2Q53GA4 152 aa7.47□□□□□ -1.21
NR1I3-209ENST00000428574 FAM219AQ8IW50 185 aa7.47□□□□□ -1.21
NR1I3-209ENST00000428574 OR52L2PQ8NGH6 319 aa7.47□□□□□ -1.21
NR1I3-209ENST00000428574 OR2T35Q8NGX2 323 aa7.47□□□□□ -1.21
NR1I3-209ENST00000428574 RFESDQ8TAC1 157 aa7.47□□□□□ -1.21
NR1I3-209ENST00000428574 H1FXQ92522 213 aaKnown RBP7.47□□□□□ -1.21
NR1I3-209ENST00000428574 RBPMSQ93062 196 aaKnown RBP7.47□□□□□ -1.21
NR1I3-209ENST00000428574 C18orf12Q96KH6 178 aa7.47□□□□□ -1.21
NR1I3-209ENST00000428574 C2orf50Q96LR7 162 aa7.47□□□□□ -1.21
NR1I3-209ENST00000428574 FAM210AQ96ND0 272 aa7.47□□□□□ -1.21
NR1I3-209ENST00000428574 FYTTD1Q96QD9 318 aaKnown RBP7.47□□□□□ -1.21
NR1I3-209ENST00000428574 SSBP3Q9BWW4 388 aaPredicted RBP7.47□□□□□ -1.21
NR1I3-209ENST00000428574 IFI27L2Q9H2X8 130 aa7.47□□□□□ -1.21
NR1I3-209ENST00000428574 UNKLQ9H9P5 680 aaKnown RBP7.47□□□□□ -1.21
NR1I3-209ENST00000428574 KCNS2Q9ULS6 477 aa7.47□□□□□ -1.21
NR1I3-209ENST00000428574 SESN1Q9Y6P5 492 aa7.47□□□□□ -1.21
NR1I3-209ENST00000428574 USP9XQ93008 2570 aaPredicted RBP7.47□□□□□ -1.21
NR1I3-209ENST00000428574 MYO18BQ8IUG5 2567 aa7.46□□□□□ -1.21
NR1I3-209ENST00000428574 PPIAL4CA0A0B4J2A2 164 aa7.46□□□□□ -1.22
NR1I3-209ENST00000428574 FAM90A9PA6NNJ1 464 aa7.46□□□□□ -1.22
NR1I3-209ENST00000428574 HMSDA8MTL9 139 aa7.46□□□□□ -1.22
NR1I3-209ENST00000428574 LYNX1G3V0Z9 82 aa7.46□□□□□ -1.22
NR1I3-209ENST00000428574 BOLA2-SMG1P6H3BVE0 249 aa7.46□□□□□ -1.22
NR1I3-209ENST00000428574 PHF1O43189 567 aaPredicted RBP7.46□□□□□ -1.22
NR1I3-209ENST00000428574 IGHV4-39P01824 125 aa7.46□□□□□ -1.22
NR1I3-209ENST00000428574 PPIAL4GP0DN37 164 aa7.46□□□□□ -1.22
NR1I3-209ENST00000428574 IGHV1-8P0DP01 117 aa7.46□□□□□ -1.22
NR1I3-209ENST00000428574 LYNX1P0DP58 116 aa7.46□□□□□ -1.22
NR1I3-209ENST00000428574 GPR12P47775 334 aa7.46□□□□□ -1.22
NR1I3-209ENST00000428574 EIF2B2P49770 351 aaKnown RBP7.46□□□□□ -1.22
NR1I3-209ENST00000428574 GNB2P62879 340 aa7.46□□□□□ -1.22
NR1I3-209ENST00000428574 CLEC2AQ6UVW9 174 aa7.46□□□□□ -1.22
NR1I3-209ENST00000428574 ZNF295-AS1Q8N0V1 137 aa7.46□□□□□ -1.22
NR1I3-209ENST00000428574 LRRC75A-AS1Q8N1F1 130 aa7.46□□□□□ -1.22
NR1I3-209ENST00000428574 LSM10Q969L4 123 aaKnown RBP7.46□□□□□ -1.22
NR1I3-209ENST00000428574 TP53RKQ96S44 253 aa7.46□□□□□ -1.22
NR1I3-209ENST00000428574 PIMREGQ9BSJ6 248 aa7.46□□□□□ -1.22
NR1I3-209ENST00000428574 TMUB1Q9BVT8 246 aa7.46□□□□□ -1.22
NR1I3-209ENST00000428574 METTL8Q9H825 291 aaKnown RBP7.46□□□□□ -1.22
NR1I3-209ENST00000428574 BEX4Q9NWD9 120 aaPredicted RBP7.46□□□□□ -1.22
NR1I3-209ENST00000428574 PRELID3BQ9Y3B1 194 aa7.46□□□□□ -1.22
NR1I3-209ENST00000428574 PKDREJQ9NTG1 2253 aa7.46□□□□□ -1.22
NR1I3-209ENST00000428574 DSCAMO60469 2012 aa7.45□□□□□ -1.22
NR1I3-209ENST00000428574 ROS1P08922 2347 aa7.45□□□□□ -1.22
NR1I3-209ENST00000428574 A0A1B0GU03 582 aa7.45□□□□□ -1.22
NR1I3-209ENST00000428574 VWC2LB2RUY7 222 aa7.45□□□□□ -1.22
NR1I3-209ENST00000428574 HSD17B6O14756 317 aa7.45□□□□□ -1.22
NR1I3-209ENST00000428574 TXNL1O43396 289 aa7.45□□□□□ -1.22
NR1I3-209ENST00000428574 ENSAO43768 121 aaKnown RBP7.45□□□□□ -1.22
NR1I3-209ENST00000428574 SLC25A4P12235 298 aa7.45□□□□□ -1.22
NR1I3-209ENST00000428574 DNASE1P24855 282 aa7.45□□□□□ -1.22
NR1I3-209ENST00000428574 IL3RAP26951 378 aa7.45□□□□□ -1.22
NR1I3-209ENST00000428574 THBS3P49746 956 aa7.45□□□□□ -1.22
NR1I3-209ENST00000428574 ERVFRD-1P60508 538 aa7.45□□□□□ -1.22
NR1I3-209ENST00000428574 CD300CQ08708 224 aa7.45□□□□□ -1.22
NR1I3-209ENST00000428574 IL15RAQ13261 267 aa7.45□□□□□ -1.22
NR1I3-209ENST00000428574 CT45A1Q5HYN5 189 aa7.45□□□□□ -1.22
NR1I3-209ENST00000428574 AVPI1Q5T686 147 aa7.45□□□□□ -1.22
NR1I3-209ENST00000428574 DHRS7BQ6IAN0 325 aaPredicted RBP7.45□□□□□ -1.22
NR1I3-209ENST00000428574 TMEM65Q6PI78 240 aa7.45□□□□□ -1.22
NR1I3-209ENST00000428574 ZNF695Q8IW36 515 aa7.45□□□□□ -1.22
NR1I3-209ENST00000428574 UXS1Q8NBZ7 420 aa7.45□□□□□ -1.22
NR1I3-209ENST00000428574 BEND2Q8NDZ0 799 aa7.45□□□□□ -1.22
NR1I3-209ENST00000428574 OR9G1Q8NH87 305 aa7.45□□□□□ -1.22
NR1I3-209ENST00000428574 CT45A3Q8NHU0 189 aa7.45□□□□□ -1.22
NR1I3-209ENST00000428574 FAM168AQ92567 244 aa7.45□□□□□ -1.22
NR1I3-209ENST00000428574 TMEM186Q96B77 213 aa7.45□□□□□ -1.22
NR1I3-209ENST00000428574 MBD6Q96DN6 1003 aa7.45□□□□□ -1.22
NR1I3-209ENST00000428574 S1PR3Q99500 378 aa7.45□□□□□ -1.22
NR1I3-209ENST00000428574 AIFM2Q9BRQ8 373 aa7.45□□□□□ -1.22
NR1I3-209ENST00000428574 PDCD10Q9BUL8 212 aa7.45□□□□□ -1.22
NR1I3-209ENST00000428574 PARP12Q9H0J9 701 aaKnown RBP7.45□□□□□ -1.22
NR1I3-209ENST00000428574 TMEM133Q9H2Q1 129 aa7.45□□□□□ -1.22
NR1I3-209ENST00000428574 SDHAF2Q9NX18 166 aa7.45□□□□□ -1.22
NR1I3-209ENST00000428574 COA4Q9NYJ1 87 aa7.45□□□□□ -1.22
NR1I3-209ENST00000428574 COMMD9Q9P000 198 aa7.45□□□□□ -1.22
NR1I3-209ENST00000428574 PSG11Q9UQ72 335 aa7.45□□□□□ -1.22
NR1I3-209ENST00000428574 KPTNQ9Y664 436 aa7.45□□□□□ -1.22
NR1I3-209ENST00000428574 ABCA4P78363 2273 aa7.45□□□□□ -1.22
NR1I3-209ENST00000428574 LOC105371242A0A075B767 164 aa7.44□□□□□ -1.22
NR1I3-209ENST00000428574 C5orf51A6NDU8 294 aa7.44□□□□□ -1.22
NR1I3-209ENST00000428574 FOXH1O75593 365 aa7.44□□□□□ -1.22
NR1I3-209ENST00000428574 LY86O95711 162 aa7.44□□□□□ -1.22
NR1I3-209ENST00000428574 FGF2P09038 288 aa7.44□□□□□ -1.22
NR1I3-209ENST00000428574 RRASP10301 218 aa7.44□□□□□ -1.22
NR1I3-209ENST00000428574 LYL1P12980 280 aa7.44□□□□□ -1.22
NR1I3-209ENST00000428574 SLC25A16P16260 332 aa7.44□□□□□ -1.22
NR1I3-209ENST00000428574 DUTP33316 252 aaKnown RBP7.44□□□□□ -1.22
NR1I3-209ENST00000428574 C2orf68Q2NKX9 166 aa7.44□□□□□ -1.22
NR1I3-209ENST00000428574 NMSQ5H8A3 153 aa7.44□□□□□ -1.22
NR1I3-209ENST00000428574 PRAMEF5Q5TYX0 476 aa7.44□□□□□ -1.22
NR1I3-209ENST00000428574 DCAF12L2Q5VW00 463 aa7.44□□□□□ -1.22
NR1I3-209ENST00000428574 TMEM268Q5VZI3 342 aa7.44□□□□□ -1.22
NR1I3-209ENST00000428574 GGNBP1Q5YKI7 109 aa7.44□□□□□ -1.22
NR1I3-209ENST00000428574 ZNF833PQ6ZTB9 187 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms