RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 PACRGLQ8N7B6 248 aa12.76□□□□□ -0.37
VARS-216ENST00000428445 NPBQ8NG41 125 aa12.76□□□□□ -0.37
VARS-216ENST00000428445 GGHQ92820 318 aa12.76□□□□□ -0.37
VARS-216ENST00000428445 Q96M66 194 aa12.76□□□□□ -0.37
VARS-216ENST00000428445 MS4A10Q96PG2 267 aa12.76□□□□□ -0.37
VARS-216ENST00000428445 CLCC1Q96S66 551 aa12.76□□□□□ -0.37
VARS-216ENST00000428445 FAM103A1Q9BTL3 118 aaKnown RBP12.76□□□□□ -0.37
VARS-216ENST00000428445 GAB2Q9UQC2 676 aa12.76□□□□□ -0.37
VARS-216ENST00000428445 ST8SIA5O15466 376 aa12.75□□□□□ -0.37
VARS-216ENST00000428445 PDCD6O75340 191 aa12.75□□□□□ -0.37
VARS-216ENST00000428445 UBBP0CG47 229 aa12.75□□□□□ -0.37
VARS-216ENST00000428445 CX3CL1P78423 397 aa12.75□□□□□ -0.37
VARS-216ENST00000428445 RPL39P5Q59GN2 51 aa12.75□□□□□ -0.37
VARS-216ENST00000428445 OR10K2Q6IF99 312 aa12.75□□□□□ -0.37
VARS-216ENST00000428445 ACSM6Q6P461 480 aa12.75□□□□□ -0.37
VARS-216ENST00000428445 FAM131AQ6UXB0 335 aa12.75□□□□□ -0.37
VARS-216ENST00000428445 DHRSXQ8N5I4 330 aa12.75□□□□□ -0.37
VARS-216ENST00000428445 GALMQ96C23 342 aa12.75□□□□□ -0.37
VARS-216ENST00000428445 DERL3Q96Q80 235 aa12.75□□□□□ -0.37
VARS-216ENST00000428445 PARP12Q9H0J9 701 aaKnown RBP12.75□□□□□ -0.37
VARS-216ENST00000428445 CST11Q9H112 138 aa12.75□□□□□ -0.37
VARS-216ENST00000428445 HYDINQ4G0P3 5121 aa12.74□□□□□ -0.37
VARS-216ENST00000428445 NDUFA3O95167 84 aa12.74□□□□□ -0.37
VARS-216ENST00000428445 FAM71F2Q6NXP2 309 aa12.74□□□□□ -0.37
VARS-216ENST00000428445 ABHD5Q8WTS1 349 aa12.74□□□□□ -0.37
VARS-216ENST00000428445 SULT4A1Q9BR01 284 aa12.74□□□□□ -0.37
VARS-216ENST00000428445 FAAP24Q9BTP7 215 aa12.74□□□□□ -0.37
VARS-216ENST00000428445 IFI27L2Q9H2X8 130 aa12.74□□□□□ -0.37
VARS-216ENST00000428445 KCNK15Q9H427 330 aa12.74□□□□□ -0.37
VARS-216ENST00000428445 PALMDQ9NP74 551 aa12.74□□□□□ -0.37
VARS-216ENST00000428445 PLCXD1Q9NUJ7 323 aa12.74□□□□□ -0.37
VARS-216ENST00000428445 KIAA1456Q9P272 454 aa12.74□□□□□ -0.37
VARS-216ENST00000428445 NUBP2Q9Y5Y2 271 aa12.74□□□□□ -0.37
VARS-216ENST00000428445 EBAG9O00559 213 aa12.73□□□□□ -0.37
VARS-216ENST00000428445 LGALS1P09382 135 aaKnown RBP12.73□□□□□ -0.37
VARS-216ENST00000428445 CT45A6P0DMU7 189 aa12.73□□□□□ -0.37
VARS-216ENST00000428445 CT45A5P0DMU8 189 aa12.73□□□□□ -0.37
VARS-216ENST00000428445 CT45A7P0DMV0 189 aa12.73□□□□□ -0.37
VARS-216ENST00000428445 CELP19835 753 aa12.73□□□□□ -0.37
VARS-216ENST00000428445 LINC00205P59089 165 aa12.73□□□□□ -0.37
VARS-216ENST00000428445 INSL4Q14641 139 aa12.73□□□□□ -0.37
VARS-216ENST00000428445 C6orf141Q5SZD1 244 aa12.73□□□□□ -0.37
VARS-216ENST00000428445 MS4A15Q8N5U1 240 aa12.73□□□□□ -0.37
VARS-216ENST00000428445 CYGBQ8WWM9 190 aa12.73□□□□□ -0.37
VARS-216ENST00000428445 IL1F10Q8WWZ1 152 aa12.73□□□□□ -0.37
VARS-216ENST00000428445 NEDD4LQ96PU5 975 aa12.73□□□□□ -0.37
VARS-216ENST00000428445 ZMAT4Q9H898 229 aa12.73□□□□□ -0.37
VARS-216ENST00000428445 PIPOXQ9P0Z9 390 aa12.73□□□□□ -0.37
VARS-216ENST00000428445 FOXA2Q9Y261 457 aaPredicted RBP12.73□□□□□ -0.37
VARS-216ENST00000428445 RRHO14718 337 aa12.72□□□□□ -0.37
VARS-216ENST00000428445 WNT4P56705 351 aa12.72□□□□□ -0.37
VARS-216ENST00000428445 PLGLAQ15195 96 aa12.72□□□□□ -0.37
VARS-216ENST00000428445 ZNF660Q6AZW8 331 aaPredicted RBP12.72□□□□□ -0.37
VARS-216ENST00000428445 C6orf201Q7Z4U5 140 aa12.72□□□□□ -0.37
VARS-216ENST00000428445 Q8N1Y9 231 aa12.72□□□□□ -0.37
VARS-216ENST00000428445 TCTEX1D1Q8N7M0 179 aa12.72□□□□□ -0.37
VARS-216ENST00000428445 OR2AK2Q8NG84 335 aa12.72□□□□□ -0.37
VARS-216ENST00000428445 OR6Q1Q8NGQ2 317 aa12.72□□□□□ -0.37
VARS-216ENST00000428445 ABHD14BQ96IU4 210 aa12.72□□□□□ -0.37
VARS-216ENST00000428445 RNF5Q99942 180 aa12.72□□□□□ -0.37
VARS-216ENST00000428445 ABRACLQ9P1F3 81 aa12.72□□□□□ -0.37
VARS-216ENST00000428445 STEAP1Q9UHE8 339 aa12.72□□□□□ -0.37
VARS-216ENST00000428445 BIRC6Q9NR09 4857 aa12.72□□□□□ -0.37
VARS-216ENST00000428445 LCE6AA0A183 80 aa12.71□□□□□ -0.37
VARS-216ENST00000428445 ITGB1BP1O14713 200 aa12.71□□□□□ -0.37
VARS-216ENST00000428445 RAB29O14966 203 aa12.71□□□□□ -0.37
VARS-216ENST00000428445 HSPB1P04792 205 aaKnown RBP12.71□□□□□ -0.37
VARS-216ENST00000428445 IGHV4-30-4P0DP06 118 aa12.71□□□□□ -0.37
VARS-216ENST00000428445 MC5RP33032 325 aa12.71□□□□□ -0.37
VARS-216ENST00000428445 CRIP2P52943 208 aaPredicted RBP12.71□□□□□ -0.37
VARS-216ENST00000428445 TMEM267Q0VDI3 215 aaPredicted RBP12.71□□□□□ -0.37
VARS-216ENST00000428445 HMGN3Q15651 99 aa12.71□□□□□ -0.37
VARS-216ENST00000428445 RNLSQ5VYX0 342 aa12.71□□□□□ -0.37
VARS-216ENST00000428445 GLT8D1Q68CQ7 371 aa12.71□□□□□ -0.37
VARS-216ENST00000428445 UNQ5815/PRO19632Q6UWF5 114 aa12.71□□□□□ -0.37
VARS-216ENST00000428445 ADAMTSL5Q6ZMM2 481 aa12.71□□□□□ -0.37
VARS-216ENST00000428445 PPP1R27Q86WC6 154 aa12.71□□□□□ -0.37
VARS-216ENST00000428445 NANOGP1Q8N7R0 232 aa12.71□□□□□ -0.37
VARS-216ENST00000428445 DRAXINQ8NBI3 349 aaPredicted RBP12.71□□□□□ -0.37
VARS-216ENST00000428445 LFNGQ8NES3 379 aa12.71□□□□□ -0.37
VARS-216ENST00000428445 SETD6Q8TBK2 473 aa12.71□□□□□ -0.37
VARS-216ENST00000428445 OR4C12Q96R67 309 aa12.71□□□□□ -0.37
VARS-216ENST00000428445 CITED4Q96RK1 184 aa12.71□□□□□ -0.37
VARS-216ENST00000428445 RIMS4Q9H426 269 aaPredicted RBP12.71□□□□□ -0.37
VARS-216ENST00000428445 PSORS1C1Q9UIG5 152 aa12.71□□□□□ -0.37
VARS-216ENST00000428445 MYL12BO14950 172 aa12.7□□□□□ -0.38
VARS-216ENST00000428445 ARPC1BO15143 372 aaKnown RBP12.7□□□□□ -0.38
VARS-216ENST00000428445 GSTP1P09211 210 aaKnown RBP12.7□□□□□ -0.38
VARS-216ENST00000428445 CD37P11049 281 aa12.7□□□□□ -0.38
VARS-216ENST00000428445 HTR2CP28335 458 aa12.7□□□□□ -0.38
VARS-216ENST00000428445 TPPP2P59282 170 aa12.7□□□□□ -0.38
VARS-216ENST00000428445 PITPNAQ00169 270 aa12.7□□□□□ -0.38
VARS-216ENST00000428445 ACTBL2Q562R1 376 aa12.7□□□□□ -0.38
VARS-216ENST00000428445 C8orf59Q8N0T1 100 aaPredicted RBP12.7□□□□□ -0.38
VARS-216ENST00000428445 KCNG3Q8TAE7 436 aa12.7□□□□□ -0.38
VARS-216ENST00000428445 PHYHIPQ92561 330 aa12.7□□□□□ -0.38
VARS-216ENST00000428445 RHOVQ96L33 236 aa12.7□□□□□ -0.38
VARS-216ENST00000428445 TM2D3Q9BRN9 247 aa12.7□□□□□ -0.38
VARS-216ENST00000428445 NICN1Q9BSH3 213 aa12.7□□□□□ -0.38
VARS-216ENST00000428445 RSRP1Q9BUV0 290 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms