RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 ANAPC1Q9H1A4 1944 aa2.23□□□□□ -2.05
LINC01040-201ENST00000425048 NUP210Q8TEM1 1887 aaPredicted RBP2.23□□□□□ -2.05
LINC01040-201ENST00000425048 KCNE1BA0A087WTH5 132 aa2.23□□□□□ -2.05
LINC01040-201ENST00000425048 A0A087WWC5 75 aa2.23□□□□□ -2.05
LINC01040-201ENST00000425048 A6NIN4 97 aa2.23□□□□□ -2.05
LINC01040-201ENST00000425048 SUPT3HB4E1H0 165 aa2.23□□□□□ -2.05
LINC01040-201ENST00000425048 E7EQ34 232 aa2.23□□□□□ -2.05
LINC01040-201ENST00000425048 G3V4G9 280 aa2.23□□□□□ -2.05
LINC01040-201ENST00000425048 K7ERU9 68 aa2.23□□□□□ -2.05
LINC01040-201ENST00000425048 CORTO00230 105 aa2.23□□□□□ -2.05
LINC01040-201ENST00000425048 GOSR2O14653 212 aa2.23□□□□□ -2.05
LINC01040-201ENST00000425048 MPZL2O60487 215 aa2.23□□□□□ -2.05
LINC01040-201ENST00000425048 YPEL1O60688 119 aa2.23□□□□□ -2.05
LINC01040-201ENST00000425048 MTX2O75431 263 aa2.23□□□□□ -2.05
LINC01040-201ENST00000425048 ECI2O75521 394 aa2.23□□□□□ -2.05
LINC01040-201ENST00000425048 STK16O75716 305 aa2.23□□□□□ -2.05
LINC01040-201ENST00000425048 SCGNO76038 276 aa2.23□□□□□ -2.05
LINC01040-201ENST00000425048 TNFSF15O95150 251 aa2.23□□□□□ -2.05
LINC01040-201ENST00000425048 LSM8O95777 96 aaKnown RBP2.23□□□□□ -2.05
LINC01040-201ENST00000425048 CD160O95971 181 aa2.23□□□□□ -2.05
LINC01040-201ENST00000425048 TRGC2P03986 189 aa2.23□□□□□ -2.05
LINC01040-201ENST00000425048 UCHL1P09936 223 aa2.23□□□□□ -2.05
LINC01040-201ENST00000425048 OR5G3P0C626 314 aa2.23□□□□□ -2.05
LINC01040-201ENST00000425048 LINC00032P0C843 101 aa2.23□□□□□ -2.05
LINC01040-201ENST00000425048 STAG3L2P0CL84 134 aa2.23□□□□□ -2.05
LINC01040-201ENST00000425048 PGA4P0DJD7 388 aa2.23□□□□□ -2.05
LINC01040-201ENST00000425048 PGA5P0DJD9 388 aa2.23□□□□□ -2.05
LINC01040-201ENST00000425048 CXCR1P25024 350 aa2.23□□□□□ -2.05
LINC01040-201ENST00000425048 PSMB5P28074 263 aa2.23□□□□□ -2.05
LINC01040-201ENST00000425048 MIPP30301 263 aa2.23□□□□□ -2.05
LINC01040-201ENST00000425048 CD80P33681 288 aa2.23□□□□□ -2.05
LINC01040-201ENST00000425048 CHI3L1P36222 383 aaPredicted RBP2.23□□□□□ -2.05
LINC01040-201ENST00000425048 OPRD1P41143 372 aa2.23□□□□□ -2.05
LINC01040-201ENST00000425048 LPAR6P43657 344 aa2.23□□□□□ -2.05
LINC01040-201ENST00000425048 RAB9AP51151 201 aa2.23□□□□□ -2.05
LINC01040-201ENST00000425048 RND2P52198 227 aa2.23□□□□□ -2.05
LINC01040-201ENST00000425048 GEMP55040 296 aa2.23□□□□□ -2.05
LINC01040-201ENST00000425048 RGS8P57771 180 aaPredicted RBP2.23□□□□□ -2.05
LINC01040-201ENST00000425048 TPI1P60174 286 aa2.23□□□□□ -2.05
LINC01040-201ENST00000425048 RAB10P61026 200 aa2.23□□□□□ -2.05
LINC01040-201ENST00000425048 SLC35A1P78382 337 aa2.23□□□□□ -2.05
LINC01040-201ENST00000425048 OR4D1Q15615 310 aa2.23□□□□□ -2.05
LINC01040-201ENST00000425048 NSDHLQ15738 373 aa2.23□□□□□ -2.05
LINC01040-201ENST00000425048 SYPL1Q16563 259 aa2.23□□□□□ -2.05
LINC01040-201ENST00000425048 IQCJQ1A5X6 159 aa2.23□□□□□ -2.05
LINC01040-201ENST00000425048 C2orf76Q3KRA6 126 aa2.23□□□□□ -2.05
LINC01040-201ENST00000425048 TTLL9Q3SXZ7 439 aa2.23□□□□□ -2.05
LINC01040-201ENST00000425048 ATP6AP1LQ52LC2 224 aa2.23□□□□□ -2.05
LINC01040-201ENST00000425048 TPTE2P1Q5T6R2 138 aa2.23□□□□□ -2.05
LINC01040-201ENST00000425048 C12orf73Q69YU5 71 aa2.23□□□□□ -2.05
LINC01040-201ENST00000425048 FAM151BQ6UXP7 276 aa2.23□□□□□ -2.05
LINC01040-201ENST00000425048 TEX43Q6ZNM6 134 aa2.23□□□□□ -2.05
LINC01040-201ENST00000425048 ZNF546Q86UE3 836 aa2.23□□□□□ -2.05
LINC01040-201ENST00000425048 TMEM156Q8N614 296 aa2.23□□□□□ -2.05
LINC01040-201ENST00000425048 COLGALT1Q8NBJ5 622 aa2.23□□□□□ -2.05
LINC01040-201ENST00000425048 ST6GALNAC3Q8NDV1 305 aa2.23□□□□□ -2.05
LINC01040-201ENST00000425048 ZNF738Q8NE65 137 aa2.23□□□□□ -2.05
LINC01040-201ENST00000425048 OR2Z1Q8NG97 314 aa2.23□□□□□ -2.05
LINC01040-201ENST00000425048 OR4C5Q8NGB2 326 aa2.23□□□□□ -2.05
LINC01040-201ENST00000425048 OR5B17Q8NGF7 314 aa2.23□□□□□ -2.05
LINC01040-201ENST00000425048 OR52I1Q8NGK6 324 aa2.23□□□□□ -2.05
LINC01040-201ENST00000425048 OR5D16Q8NGK9 328 aa2.23□□□□□ -2.05
LINC01040-201ENST00000425048 SFXN5Q8TD22 340 aa2.23□□□□□ -2.05
LINC01040-201ENST00000425048 EEF1AKMT1Q8WVE0 214 aa2.23□□□□□ -2.05
LINC01040-201ENST00000425048 SPRYD4Q8WW59 207 aaPredicted RBP2.23□□□□□ -2.05
LINC01040-201ENST00000425048 ASB17Q8WXJ9 295 aa2.23□□□□□ -2.05
LINC01040-201ENST00000425048 NDRG1Q92597 394 aaKnown RBP2.23□□□□□ -2.05
LINC01040-201ENST00000425048 BCL2L2Q92843 193 aaPredicted RBP2.23□□□□□ -2.05
LINC01040-201ENST00000425048 SMARCD2Q92925 531 aa2.23□□□□□ -2.05
LINC01040-201ENST00000425048 PIK3IP1Q96FE7 263 aa2.23□□□□□ -2.05
LINC01040-201ENST00000425048 REEP6Q96HR9 211 aa2.23□□□□□ -2.05
LINC01040-201ENST00000425048 C4orf36Q96KX1 117 aa2.23□□□□□ -2.05
LINC01040-201ENST00000425048 YPEL2Q96QA6 119 aa2.23□□□□□ -2.05
LINC01040-201ENST00000425048 SLC6A7Q99884 636 aa2.23□□□□□ -2.05
LINC01040-201ENST00000425048 AIF1LQ9BQI0 150 aa2.23□□□□□ -2.05
LINC01040-201ENST00000425048 GINS3Q9BRX5 216 aa2.23□□□□□ -2.05
LINC01040-201ENST00000425048 C20orf24Q9BUV8 137 aa2.23□□□□□ -2.05
LINC01040-201ENST00000425048 ALG12Q9BV10 488 aa2.23□□□□□ -2.05
LINC01040-201ENST00000425048 TSSK6Q9BXA6 273 aa2.23□□□□□ -2.05
LINC01040-201ENST00000425048 MS4A8Q9BY19 250 aa2.23□□□□□ -2.05
LINC01040-201ENST00000425048 KRTAP4-1Q9BYQ7 146 aa2.23□□□□□ -2.05
LINC01040-201ENST00000425048 PORCNQ9H237 461 aa2.23□□□□□ -2.05
LINC01040-201ENST00000425048 C1orf198Q9H425 327 aa2.23□□□□□ -2.05
LINC01040-201ENST00000425048 AUNIPQ9H7T9 357 aa2.23□□□□□ -2.05
LINC01040-201ENST00000425048 REEP1Q9H902 201 aa2.23□□□□□ -2.05
LINC01040-201ENST00000425048 FGF20Q9NP95 211 aaPredicted RBP2.23□□□□□ -2.05
LINC01040-201ENST00000425048 PNO1Q9NRX1 252 aaKnown RBP2.23□□□□□ -2.05
LINC01040-201ENST00000425048 OR5AC2Q9NZP5 309 aa2.23□□□□□ -2.05
LINC01040-201ENST00000425048 CNIH4Q9P003 139 aa2.23□□□□□ -2.05
LINC01040-201ENST00000425048 VPS29Q9UBQ0 182 aa2.23□□□□□ -2.05
LINC01040-201ENST00000425048 ZNF230Q9UIE0 474 aaPredicted RBP2.23□□□□□ -2.05
LINC01040-201ENST00000425048 SLC22A13Q9Y226 551 aa2.23□□□□□ -2.05
LINC01040-201ENST00000425048 ANGPT4Q9Y264 503 aa2.23□□□□□ -2.05
LINC01040-201ENST00000425048 RHBDD3Q9Y3P4 386 aa2.23□□□□□ -2.05
LINC01040-201ENST00000425048 LTBP4Q8N2S1 1624 aa2.23□□□□□ -2.05
LINC01040-201ENST00000425048 CASP8AP2Q9UKL3 1982 aa2.23□□□□□ -2.05
LINC01040-201ENST00000425048 KCPQ6ZWJ8 1503 aa2.22□□□□□ -2.05
LINC01040-201ENST00000425048 PLXNA2O75051 1894 aa2.22□□□□□ -2.05
LINC01040-201ENST00000425048 COL4A1P02462 1669 aa2.22□□□□□ -2.05
LINC01040-201ENST00000425048 EML5Q05BV3 1969 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms