RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 RBBP9O75884 186 aa12.67□□□□□ -0.38
CHCHD3-202ENST00000423635 BRI3O95415 125 aa12.67□□□□□ -0.38
CHCHD3-202ENST00000423635 CT45A6P0DMU7 189 aa12.67□□□□□ -0.38
CHCHD3-202ENST00000423635 CT45A5P0DMU8 189 aa12.67□□□□□ -0.38
CHCHD3-202ENST00000423635 CT45A7P0DMV0 189 aa12.67□□□□□ -0.38
CHCHD3-202ENST00000423635 PPP3R1P63098 170 aa12.67□□□□□ -0.38
CHCHD3-202ENST00000423635 TATDN3Q17R31 274 aa12.67□□□□□ -0.38
CHCHD3-202ENST00000423635 POC5Q8NA72 575 aa12.67□□□□□ -0.38
CHCHD3-202ENST00000423635 IFI27L2Q9H2X8 130 aa12.67□□□□□ -0.38
CHCHD3-202ENST00000423635 PLEKHA3Q9HB20 300 aa12.67□□□□□ -0.38
CHCHD3-202ENST00000423635 ERVK13-1Q9NX77 482 aa12.67□□□□□ -0.38
CHCHD3-202ENST00000423635 FAM53CQ9NYF3 392 aa12.67□□□□□ -0.38
CHCHD3-202ENST00000423635 PIPOXQ9P0Z9 390 aa12.67□□□□□ -0.38
CHCHD3-202ENST00000423635 LRRC42Q9Y546 428 aa12.67□□□□□ -0.38
CHCHD3-202ENST00000423635 KIAA1109Q2LD37 5005 aa12.67□□□□□ -0.38
CHCHD3-202ENST00000423635 HECTD4Q9Y4D8 3996 aa12.66□□□□□ -0.38
CHCHD3-202ENST00000423635 FAM90A7PA6NKC0 464 aa12.66□□□□□ -0.38
CHCHD3-202ENST00000423635 FAM90A23PA8MXZ1 464 aa12.66□□□□□ -0.38
CHCHD3-202ENST00000423635 ATP8B1O43520 1251 aa12.66□□□□□ -0.38
CHCHD3-202ENST00000423635 CNIH1O95406 144 aa12.66□□□□□ -0.38
CHCHD3-202ENST00000423635 GSTP1P09211 210 aaKnown RBP12.66□□□□□ -0.38
CHCHD3-202ENST00000423635 GTF2A1P52655 376 aaPredicted RBP12.66□□□□□ -0.38
CHCHD3-202ENST00000423635 LAX1Q8IWV1 398 aa12.66□□□□□ -0.38
CHCHD3-202ENST00000423635 OR2AK2Q8NG84 335 aa12.66□□□□□ -0.38
CHCHD3-202ENST00000423635 OR5AN1Q8NGI8 311 aa12.66□□□□□ -0.38
CHCHD3-202ENST00000423635 GALMQ96C23 342 aa12.66□□□□□ -0.38
CHCHD3-202ENST00000423635 CLCC1Q96S66 551 aa12.66□□□□□ -0.38
CHCHD3-202ENST00000423635 H0YJW9 148 aa12.65□□□□□ -0.38
CHCHD3-202ENST00000423635 RAB29O14966 203 aa12.65□□□□□ -0.38
CHCHD3-202ENST00000423635 TPPPO94811 219 aa12.65□□□□□ -0.38
CHCHD3-202ENST00000423635 CA2P00918 260 aa12.65□□□□□ -0.38
CHCHD3-202ENST00000423635 MAS1P04201 325 aa12.65□□□□□ -0.38
CHCHD3-202ENST00000423635 IGFBP3P17936 291 aaPredicted RBP12.65□□□□□ -0.38
CHCHD3-202ENST00000423635 FUT3P21217 361 aa12.65□□□□□ -0.38
CHCHD3-202ENST00000423635 CD81P60033 236 aa12.65□□□□□ -0.38
CHCHD3-202ENST00000423635 PSG5Q15238 335 aa12.65□□□□□ -0.38
CHCHD3-202ENST00000423635 CCDC197Q8NCU1 140 aa12.65□□□□□ -0.38
CHCHD3-202ENST00000423635 MRPL30Q8TCC3 161 aaKnown RBP12.65□□□□□ -0.38
CHCHD3-202ENST00000423635 SLC7A6OSQ96CW6 309 aaPredicted RBP12.65□□□□□ -0.38
CHCHD3-202ENST00000423635 ZNF184Q99676 751 aaPredicted RBP12.65□□□□□ -0.38
CHCHD3-202ENST00000423635 NEURL2Q9BR09 285 aa12.65□□□□□ -0.38
CHCHD3-202ENST00000423635 ST6GALNAC5Q9BVH7 336 aa12.65□□□□□ -0.38
CHCHD3-202ENST00000423635 ZNF355PQ9NSJ1 428 aa12.65□□□□□ -0.38
CHCHD3-202ENST00000423635 METTL1Q9UBP6 276 aaKnown RBP12.65□□□□□ -0.38
CHCHD3-202ENST00000423635 PEF1Q9UBV8 284 aaKnown RBP12.65□□□□□ -0.38
CHCHD3-202ENST00000423635 AP4S1Q9Y587 144 aa12.65□□□□□ -0.38
CHCHD3-202ENST00000423635 ZNF785A8K8V0 405 aa12.64□□□□□ -0.39
CHCHD3-202ENST00000423635 SLC22A1O15245 554 aa12.64□□□□□ -0.39
CHCHD3-202ENST00000423635 GPX5O75715 221 aa12.64□□□□□ -0.39
CHCHD3-202ENST00000423635 SNRPBP14678 240 aaKnown RBP12.64□□□□□ -0.39
CHCHD3-202ENST00000423635 ALDH3A2P51648 485 aa12.64□□□□□ -0.39
CHCHD3-202ENST00000423635 RIPK1Q13546 671 aa12.64□□□□□ -0.39
CHCHD3-202ENST00000423635 DMKNQ6E0U4 476 aaPredicted RBP12.64□□□□□ -0.39
CHCHD3-202ENST00000423635 SIGIRRQ6IA17 410 aa12.64□□□□□ -0.39
CHCHD3-202ENST00000423635 ZNF343Q6P1L6 599 aa12.64□□□□□ -0.39
CHCHD3-202ENST00000423635 RPL22L1Q6P5R6 122 aaKnown RBP12.64□□□□□ -0.39
CHCHD3-202ENST00000423635 GHSRQ92847 366 aa12.64□□□□□ -0.39
CHCHD3-202ENST00000423635 OR14A2Q96R54 314 aa12.64□□□□□ -0.39
CHCHD3-202ENST00000423635 ADAM30Q9UKF2 790 aa12.64□□□□□ -0.39
CHCHD3-202ENST00000423635 OAZ3Q9UMX2 235 aa12.64□□□□□ -0.39
CHCHD3-202ENST00000423635 WASHC3Q9Y3C0 194 aa12.64□□□□□ -0.39
CHCHD3-202ENST00000423635 UBE2QL1A1L167 161 aa12.63□□□□□ -0.39
CHCHD3-202ENST00000423635 OR2A4O95047 310 aa12.63□□□□□ -0.39
CHCHD3-202ENST00000423635 FCGR1AP12314 374 aa12.63□□□□□ -0.39
CHCHD3-202ENST00000423635 GABRB1P18505 474 aa12.63□□□□□ -0.39
CHCHD3-202ENST00000423635 FSTP19883 344 aa12.63□□□□□ -0.39
CHCHD3-202ENST00000423635 AADACP22760 399 aa12.63□□□□□ -0.39
CHCHD3-202ENST00000423635 FXYD3Q14802 87 aa12.63□□□□□ -0.39
CHCHD3-202ENST00000423635 CCDC58Q4VC31 144 aa12.63□□□□□ -0.39
CHCHD3-202ENST00000423635 RPL39P5Q59GN2 51 aa12.63□□□□□ -0.39
CHCHD3-202ENST00000423635 GLIPR1L1Q6UWM5 242 aa12.63□□□□□ -0.39
CHCHD3-202ENST00000423635 GLDNQ6ZMI3 551 aaPredicted RBP12.63□□□□□ -0.39
CHCHD3-202ENST00000423635 DEFB125Q8N687 156 aa12.63□□□□□ -0.39
CHCHD3-202ENST00000423635 OR5T1Q8NG75 326 aa12.63□□□□□ -0.39
CHCHD3-202ENST00000423635 CYYR1Q96J86 154 aa12.63□□□□□ -0.39
CHCHD3-202ENST00000423635 TMEM68Q96MH6 324 aa12.63□□□□□ -0.39
CHCHD3-202ENST00000423635 SLC2A8Q9NY64 477 aa12.63□□□□□ -0.39
CHCHD3-202ENST00000423635 AASSQ9UDR5 926 aa12.63□□□□□ -0.39
CHCHD3-202ENST00000423635 H7C2Y5 167 aa12.62□□□□□ -0.39
CHCHD3-202ENST00000423635 ST8SIA5O15466 376 aa12.62□□□□□ -0.39
CHCHD3-202ENST00000423635 AIREO43918 545 aa12.62□□□□□ -0.39
CHCHD3-202ENST00000423635 SPDEFO95238 335 aa12.62□□□□□ -0.39
CHCHD3-202ENST00000423635 CD7P09564 240 aa12.62□□□□□ -0.39
CHCHD3-202ENST00000423635 HMGN3Q15651 99 aa12.62□□□□□ -0.39
CHCHD3-202ENST00000423635 C6orf141Q5SZD1 244 aa12.62□□□□□ -0.39
CHCHD3-202ENST00000423635 ORAI1Q96D31 301 aa12.62□□□□□ -0.39
CHCHD3-202ENST00000423635 CENPNQ96H22 339 aaPredicted RBP12.62□□□□□ -0.39
CHCHD3-202ENST00000423635 MRPS18AQ9NVS2 196 aaKnown RBP12.62□□□□□ -0.39
CHCHD3-202ENST00000423635 PEMTQ9UBM1 199 aa12.62□□□□□ -0.39
CHCHD3-202ENST00000423635 STEAP1Q9UHE8 339 aa12.62□□□□□ -0.39
CHCHD3-202ENST00000423635 SLC23A1Q9UHI7 598 aa12.62□□□□□ -0.39
CHCHD3-202ENST00000423635 TRBV12-3P01733 135 aa12.62□□□□□ -0.39
CHCHD3-202ENST00000423635 RPEL1Q2QD12 228 aa12.62□□□□□ -0.39
CHCHD3-202ENST00000423635 CD300EQ496F6 205 aaPredicted RBP12.62□□□□□ -0.39
CHCHD3-202ENST00000423635 XAF1Q6GPH4 301 aa12.62□□□□□ -0.39
CHCHD3-202ENST00000423635 MUL1Q969V5 352 aa12.62□□□□□ -0.39
CHCHD3-202ENST00000423635 USMG5Q96IX5 58 aa12.62□□□□□ -0.39
CHCHD3-202ENST00000423635 Q96M66 194 aa12.62□□□□□ -0.39
CHCHD3-202ENST00000423635 AGMATQ9BSE5 352 aa12.62□□□□□ -0.39
CHCHD3-202ENST00000423635 SELENOIQ9C0D9 397 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms