RNA–Protein interactions for RNA: ENST00000423463.6

VPS13A-208, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2

Gene VPS13A, Length 2,702 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-208ENST00000423463 IL36GQ9NZH8 169 aa2□□□□□ -2.09
VPS13A-208ENST00000423463 GHRLQ9UBU3 117 aa2□□□□□ -2.09
VPS13A-208ENST00000423463 FLNAP21333 2647 aaKnown RBP2□□□□□ -2.09
VPS13A-208ENST00000423463 FN1P02751 2386 aaKnown RBP2□□□□□ -2.09
VPS13A-208ENST00000423463 MTORP42345 2549 aa2□□□□□ -2.09
VPS13A-208ENST00000423463 TRAV8-7A0A075B6U6 113 aa2□□□□□ -2.09
VPS13A-208ENST00000423463 PNMA8CA0A1B0GUJ8 204 aa2□□□□□ -2.09
VPS13A-208ENST00000423463 A0A1B0GW55 424 aa2□□□□□ -2.09
VPS13A-208ENST00000423463 TRDV1A0A1B0GX56 115 aa2□□□□□ -2.09
VPS13A-208ENST00000423463 hADV38S2A0JD32 116 aa2□□□□□ -2.09
VPS13A-208ENST00000423463 DEGS1O15121 323 aa2□□□□□ -2.09
VPS13A-208ENST00000423463 TCF21O43680 179 aa2□□□□□ -2.09
VPS13A-208ENST00000423463 SC5DO75845 299 aa2□□□□□ -2.09
VPS13A-208ENST00000423463 ARL6IP5O75915 188 aa2□□□□□ -2.09
VPS13A-208ENST00000423463 TFF1P04155 84 aa2□□□□□ -2.09
VPS13A-208ENST00000423463 SFTPBP07988 381 aa2□□□□□ -2.09
VPS13A-208ENST00000423463 UBBP0CG47 229 aa2□□□□□ -2.09
VPS13A-208ENST00000423463 DUX4L2P0CJ85 424 aa2□□□□□ -2.09
VPS13A-208ENST00000423463 DUX4L3P0CJ86 424 aa2□□□□□ -2.09
VPS13A-208ENST00000423463 DUX4L4P0CJ87 422 aa2□□□□□ -2.09
VPS13A-208ENST00000423463 DUX4L5P0CJ88 424 aa2□□□□□ -2.09
VPS13A-208ENST00000423463 DUX4L6P0CJ89 424 aa2□□□□□ -2.09
VPS13A-208ENST00000423463 DUX4L7P0CJ90 424 aa2□□□□□ -2.09
VPS13A-208ENST00000423463 HSMCR30P0CW71 290 aa2□□□□□ -2.09
VPS13A-208ENST00000423463 SMIM18P0DKX4 95 aa2□□□□□ -2.09
VPS13A-208ENST00000423463 SRMP19623 302 aa2□□□□□ -2.09
VPS13A-208ENST00000423463 GALP22466 123 aa2□□□□□ -2.09
VPS13A-208ENST00000423463 MAP2K4P45985 399 aa2□□□□□ -2.09
VPS13A-208ENST00000423463 KCNJ3P48549 501 aa2□□□□□ -2.09
VPS13A-208ENST00000423463 PSMD7P51665 324 aa2□□□□□ -2.09
VPS13A-208ENST00000423463 RPL31P62899 125 aaKnown RBP2□□□□□ -2.09
VPS13A-208ENST00000423463 RSU1Q15404 277 aa2□□□□□ -2.09
VPS13A-208ENST00000423463 KCTD21Q4G0X4 260 aa2□□□□□ -2.09
VPS13A-208ENST00000423463 HSD17B12Q53GQ0 312 aa2□□□□□ -2.09
VPS13A-208ENST00000423463 NHLRC3Q5JS37 347 aa2□□□□□ -2.09
VPS13A-208ENST00000423463 C1orf100Q5SVJ3 147 aa2□□□□□ -2.09
VPS13A-208ENST00000423463 GPR157Q5UAW9 335 aa2□□□□□ -2.09
VPS13A-208ENST00000423463 UBE2UQ5VVX9 321 aa2□□□□□ -2.09
VPS13A-208ENST00000423463 LIPKQ5VXJ0 399 aa2□□□□□ -2.09
VPS13A-208ENST00000423463 GLT8D1Q68CQ7 371 aa2□□□□□ -2.09
VPS13A-208ENST00000423463 NCR3LG1Q68D85 454 aa2□□□□□ -2.09
VPS13A-208ENST00000423463 FAM53AQ6NSI3 398 aaPredicted RBP2□□□□□ -2.09
VPS13A-208ENST00000423463 Q6P435 159 aa2□□□□□ -2.09
VPS13A-208ENST00000423463 DUX4L9Q6RFH8 374 aaPredicted RBP2□□□□□ -2.09
VPS13A-208ENST00000423463 C17orf107Q6ZR85 190 aa2□□□□□ -2.09
VPS13A-208ENST00000423463 GDPD3Q7L5L3 318 aa2□□□□□ -2.09
VPS13A-208ENST00000423463 LYPD6Q86Y78 171 aa2□□□□□ -2.09
VPS13A-208ENST00000423463 FGFRL1Q8N441 504 aa2□□□□□ -2.09
VPS13A-208ENST00000423463 BPIFB2Q8N4F0 458 aa2□□□□□ -2.09
VPS13A-208ENST00000423463 ASCC1Q8N9N2 400 aaKnown RBP2□□□□□ -2.09
VPS13A-208ENST00000423463 THAP8Q8NA92 274 aa2□□□□□ -2.09
VPS13A-208ENST00000423463 OR5D18Q8NGL1 313 aa2□□□□□ -2.09
VPS13A-208ENST00000423463 TMEM158Q8WZ71 300 aa2□□□□□ -2.09
VPS13A-208ENST00000423463 MRPS24Q96EL2 167 aaKnown RBP2□□□□□ -2.09
VPS13A-208ENST00000423463 TBX15Q96SF7 602 aa2□□□□□ -2.09
VPS13A-208ENST00000423463 UQCC2Q9BRT2 126 aa2□□□□□ -2.09
VPS13A-208ENST00000423463 ELL3Q9HB65 397 aaPredicted RBP2□□□□□ -2.09
VPS13A-208ENST00000423463 DNAJC4Q9NNZ3 241 aa2□□□□□ -2.09
VPS13A-208ENST00000423463 RBFOX1Q9NWB1 397 aaKnown RBP2□□□□□ -2.09
VPS13A-208ENST00000423463 DUX4Q9UBX2 424 aa2□□□□□ -2.09
VPS13A-208ENST00000423463 GSTK1Q9Y2Q3 226 aa2□□□□□ -2.09
VPS13A-208ENST00000423463 MRPS28Q9Y2Q9 187 aaKnown RBP2□□□□□ -2.09
VPS13A-208ENST00000423463 KCNK7Q9Y2U2 307 aa2□□□□□ -2.09
VPS13A-208ENST00000423463 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2□□□□□ -2.099e-10■■■■■ 36.7
VPS13A-208ENST00000423463 TEP1Q99973 2627 aaKnown RBP2□□□□□ -2.09
VPS13A-208ENST00000423463 TRAV1-2A0A0B4J238 106 aa1.99□□□□□ -2.09
VPS13A-208ENST00000423463 IGHV1-69DA0A0B4J2H0 117 aa1.99□□□□□ -2.09
VPS13A-208ENST00000423463 CENPVL3A0A0U1RRI6 287 aa1.99□□□□□ -2.09
VPS13A-208ENST00000423463 C17orf98A8MV24 154 aa1.99□□□□□ -2.09
VPS13A-208ENST00000423463 CCRL2O00421 344 aa1.99□□□□□ -2.09
VPS13A-208ENST00000423463 PDCD5O14737 125 aa1.99□□□□□ -2.09
VPS13A-208ENST00000423463 CDRT1O95170 752 aa1.99□□□□□ -2.09
VPS13A-208ENST00000423463 OR2H2O95918 312 aa1.99□□□□□ -2.09
VPS13A-208ENST00000423463 IGHV1-69P01742 117 aa1.99□□□□□ -2.09
VPS13A-208ENST00000423463 RBP4P02753 201 aa1.99□□□□□ -2.09
VPS13A-208ENST00000423463 MAS1P04201 325 aa1.99□□□□□ -2.09
VPS13A-208ENST00000423463 CSN2P05814 226 aa1.99□□□□□ -2.09
VPS13A-208ENST00000423463 GLAP06280 429 aa1.99□□□□□ -2.09
VPS13A-208ENST00000423463 ZNF728P0DKX0 622 aa1.99□□□□□ -2.09
VPS13A-208ENST00000423463 GTF2F2P13984 249 aa1.99□□□□□ -2.09
VPS13A-208ENST00000423463 ZNF44P15621 663 aa1.99□□□□□ -2.09
VPS13A-208ENST00000423463 GNB3P16520 340 aa1.99□□□□□ -2.09
VPS13A-208ENST00000423463 GABRR1P24046 479 aa1.99□□□□□ -2.09
VPS13A-208ENST00000423463 MNDAP41218 407 aa1.99□□□□□ -2.09
VPS13A-208ENST00000423463 NKX2-1P43699 371 aaPredicted RBP1.99□□□□□ -2.09
VPS13A-208ENST00000423463 OR3A1P47881 315 aa1.99□□□□□ -2.09
VPS13A-208ENST00000423463 OR3A4PP47883 348 aa1.99□□□□□ -2.09
VPS13A-208ENST00000423463 CEBPDP49716 269 aaPredicted RBP1.99□□□□□ -2.09
VPS13A-208ENST00000423463 EDDM3BP56851 147 aa1.99□□□□□ -2.09
VPS13A-208ENST00000423463 HILS1P60008 231 aa1.99□□□□□ -2.09
VPS13A-208ENST00000423463 RPS25P62851 125 aaKnown RBP1.99□□□□□ -2.09
VPS13A-208ENST00000423463 GNB1P62873 340 aa1.99□□□□□ -2.09
VPS13A-208ENST00000423463 GRK1Q15835 563 aa1.99□□□□□ -2.09
VPS13A-208ENST00000423463 MPV17LQ2QL34 196 aa1.99□□□□□ -2.09
VPS13A-208ENST00000423463 ZNF773Q6PK81 442 aa1.99□□□□□ -2.09
VPS13A-208ENST00000423463 CD200R1LQ6Q8B3 271 aa1.99□□□□□ -2.09
VPS13A-208ENST00000423463 GLIPR1L1Q6UWM5 242 aa1.99□□□□□ -2.09
VPS13A-208ENST00000423463 TMEM91Q6ZNR0 172 aa1.99□□□□□ -2.09
VPS13A-208ENST00000423463 VMO1Q7Z5L0 202 aa1.99□□□□□ -2.09
VPS13A-208ENST00000423463 LINC00596Q86U02 117 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 139.4 ms