RNA–Protein interactions for RNA: ENST00000422080.5

HDLBP-208, Transcript of high density lipoprotein binding protein, human

TSL 3

Gene HDLBP, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-208	ENST00000422080	RAB29	O14966	203 aa		13.91	□□□□□ -0.18
HDLBP-208	ENST00000422080	HLA-DRB1	P01911	266 aa		13.91	□□□□□ -0.18
HDLBP-208	ENST00000422080	CALR	P27797	417 aa	Known RBP	13.91	□□□□□ -0.18
HDLBP-208	ENST00000422080	MAP2K4	P45985	399 aa		13.91	□□□□□ -0.18
HDLBP-208	ENST00000422080	TMEM50B	P56557	158 aa		13.91	□□□□□ -0.18
HDLBP-208	ENST00000422080	FABP5	Q01469	135 aa		13.91	□□□□□ -0.18
HDLBP-208	ENST00000422080	C2orf76	Q3KRA6	126 aa		13.91	□□□□□ -0.18
HDLBP-208	ENST00000422080	NPB	Q8NG41	125 aa		13.91	□□□□□ -0.18
HDLBP-208	ENST00000422080	ZMAT5	Q9UDW3	170 aa	Known RBP	13.91	□□□□□ -0.18
HDLBP-208	ENST00000422080	NBR2	O15453	112 aa		13.9	□□□□□ -0.18
HDLBP-208	ENST00000422080	ST8SIA5	O15466	376 aa		13.9	□□□□□ -0.18
HDLBP-208	ENST00000422080	SLC2A2	P11168	524 aa	Predicted RBP	13.9	□□□□□ -0.18
HDLBP-208	ENST00000422080	PSMB8	P28062	276 aa		13.9	□□□□□ -0.18
HDLBP-208	ENST00000422080	HOXD3	P31249	432 aa	Predicted RBP	13.9	□□□□□ -0.18
HDLBP-208	ENST00000422080	C5orf64	Q2M2E5	130 aa		13.9	□□□□□ -0.18
HDLBP-208	ENST00000422080	LIN54	Q6MZP7	749 aa		13.9	□□□□□ -0.18
HDLBP-208	ENST00000422080	LCNL1	Q6ZST4	164 aa		13.9	□□□□□ -0.18
HDLBP-208	ENST00000422080	OR8U1	Q8NH10	309 aa		13.9	□□□□□ -0.18
HDLBP-208	ENST00000422080	FAM3D	Q96BQ1	224 aa		13.9	□□□□□ -0.18
HDLBP-208	ENST00000422080	OR51J1	Q9H342	316 aa		13.9	□□□□□ -0.18
HDLBP-208	ENST00000422080	BLOC1S6	Q9UL45	172 aa		13.9	□□□□□ -0.18
HDLBP-208	ENST00000422080		V9GY05	133 aa		13.9	□□□□□ -0.18
HDLBP-208	ENST00000422080	WI2-2373I1.2	A0A1W2PRP0	233 aa		13.89	□□□□□ -0.19
HDLBP-208	ENST00000422080	LDLRAD4	O15165	306 aa		13.89	□□□□□ -0.19
HDLBP-208	ENST00000422080	NDUFA3	O95167	84 aa		13.89	□□□□□ -0.19
HDLBP-208	ENST00000422080	CT45A6	P0DMU7	189 aa		13.89	□□□□□ -0.19
HDLBP-208	ENST00000422080	CT45A5	P0DMU8	189 aa		13.89	□□□□□ -0.19
HDLBP-208	ENST00000422080	CT45A7	P0DMV0	189 aa		13.89	□□□□□ -0.19
HDLBP-208	ENST00000422080	ZBTB25	P24278	435 aa		13.89	□□□□□ -0.19
HDLBP-208	ENST00000422080	CNTFR	P26992	372 aa		13.89	□□□□□ -0.19
HDLBP-208	ENST00000422080	PPIF	P30405	207 aa	Known RBP	13.89	□□□□□ -0.19
HDLBP-208	ENST00000422080	MC5R	P33032	325 aa		13.89	□□□□□ -0.19
HDLBP-208	ENST00000422080	CEACAM6	P40199	344 aa		13.89	□□□□□ -0.19
HDLBP-208	ENST00000422080	VEGFC	P49767	419 aa		13.89	□□□□□ -0.19
HDLBP-208	ENST00000422080	HLA-DRB3	P79483	266 aa		13.89	□□□□□ -0.19
HDLBP-208	ENST00000422080	TBCE	Q15813	527 aa	Predicted RBP	13.89	□□□□□ -0.19
HDLBP-208	ENST00000422080	IZUMO2	Q6UXV1	221 aa		13.89	□□□□□ -0.19
HDLBP-208	ENST00000422080	ZNF367	Q7RTV3	350 aa		13.89	□□□□□ -0.19
HDLBP-208	ENST00000422080	OR56B1	Q8NGI3	324 aa		13.89	□□□□□ -0.19
HDLBP-208	ENST00000422080	MYOZ3	Q8TDC0	251 aa		13.89	□□□□□ -0.19
HDLBP-208	ENST00000422080	EDARADD	Q8WWZ3	215 aa		13.89	□□□□□ -0.19
HDLBP-208	ENST00000422080	PTX4	Q96A99	478 aa		13.89	□□□□□ -0.19
HDLBP-208	ENST00000422080	ARHGAP5-AS1	Q96IT6	56 aa		13.89	□□□□□ -0.19
HDLBP-208	ENST00000422080	DUX3	Q96PT4	197 aa		13.89	□□□□□ -0.19
HDLBP-208	ENST00000422080	AGMAT	Q9BSE5	352 aa		13.89	□□□□□ -0.19
HDLBP-208	ENST00000422080	HDHD3	Q9BSH5	251 aa	Predicted RBP	13.89	□□□□□ -0.19
HDLBP-208	ENST00000422080	PECR	Q9BY49	303 aa		13.89	□□□□□ -0.19
HDLBP-208	ENST00000422080		Q9N2K0	584 aa		13.89	□□□□□ -0.19
HDLBP-208	ENST00000422080	C12orf4	Q9NQ89	552 aa		13.89	□□□□□ -0.19
HDLBP-208	ENST00000422080	KIAA1456	Q9P272	454 aa		13.89	□□□□□ -0.19
HDLBP-208	ENST00000422080	IGHV7-81	A0A0B4J1V7	117 aa		13.88	□□□□□ -0.19
HDLBP-208	ENST00000422080	OR5H14	A6NHG9	310 aa		13.88	□□□□□ -0.19
HDLBP-208	ENST00000422080	CLDN12	P56749	244 aa		13.88	□□□□□ -0.19
HDLBP-208	ENST00000422080	C4orf3	Q8WVX3	66 aa		13.88	□□□□□ -0.19
HDLBP-208	ENST00000422080	CNBD2	Q96M20	576 aa		13.88	□□□□□ -0.19
HDLBP-208	ENST00000422080	CMSS1	Q9BQ75	279 aa	Known RBP	13.88	□□□□□ -0.19
HDLBP-208	ENST00000422080	PARP12	Q9H0J9	701 aa	Known RBP	13.88	□□□□□ -0.19
HDLBP-208	ENST00000422080	C11orf54	Q9H0W9	315 aa	Predicted RBP	13.88	□□□□□ -0.19
HDLBP-208	ENST00000422080	RAB22A	Q9UL26	194 aa		13.88	□□□□□ -0.19
HDLBP-208	ENST00000422080	WSB1	Q9Y6I7	421 aa		13.88	□□□□□ -0.19
HDLBP-208	ENST00000422080	TRAV1-2	A0A0B4J238	106 aa		13.87	□□□□□ -0.19
HDLBP-208	ENST00000422080	HSPA12A	O43301	675 aa		13.87	□□□□□ -0.19
HDLBP-208	ENST00000422080	DENR	O43583	198 aa	Known RBP	13.87	□□□□□ -0.19
HDLBP-208	ENST00000422080	IGLV1-40	P01703	118 aa		13.87	□□□□□ -0.19
HDLBP-208	ENST00000422080	SCT	P09683	121 aa		13.87	□□□□□ -0.19
HDLBP-208	ENST00000422080	RPL39P5	Q59GN2	51 aa		13.87	□□□□□ -0.19
HDLBP-208	ENST00000422080	DEFB121	Q5J5C9	76 aa		13.87	□□□□□ -0.19
HDLBP-208	ENST00000422080	PLAC9	Q5JTB6	97 aa		13.87	□□□□□ -0.19
HDLBP-208	ENST00000422080	ZNF660	Q6AZW8	331 aa	Predicted RBP	13.87	□□□□□ -0.19
HDLBP-208	ENST00000422080	TMEM65	Q6PI78	240 aa		13.87	□□□□□ -0.19
HDLBP-208	ENST00000422080	FAM131A	Q6UXB0	335 aa		13.87	□□□□□ -0.19
HDLBP-208	ENST00000422080	OR5AN1	Q8NGI8	311 aa		13.87	□□□□□ -0.19
HDLBP-208	ENST00000422080	OR5M8	Q8NGP6	311 aa		13.87	□□□□□ -0.19
HDLBP-208	ENST00000422080	ABHD14B	Q96IU4	210 aa		13.87	□□□□□ -0.19
HDLBP-208	ENST00000422080	UBE2E2	Q96LR5	201 aa		13.87	□□□□□ -0.19
HDLBP-208	ENST00000422080	RNF5	Q99942	180 aa		13.87	□□□□□ -0.19
HDLBP-208	ENST00000422080	OR1A1	Q9P1Q5	309 aa		13.87	□□□□□ -0.19
HDLBP-208	ENST00000422080	RAB26	Q9ULW5	256 aa		13.87	□□□□□ -0.19
HDLBP-208	ENST00000422080	TRAV41	A0A0B4J266	112 aa		13.86	□□□□□ -0.19
HDLBP-208	ENST00000422080	TMEM272	A0A1B0GTI8	110 aa		13.86	□□□□□ -0.19
HDLBP-208	ENST00000422080	TRDC	B7Z8K6	153 aa		13.86	□□□□□ -0.19
HDLBP-208	ENST00000422080		G3V318	75 aa		13.86	□□□□□ -0.19
HDLBP-208	ENST00000422080		H0YJW9	148 aa		13.86	□□□□□ -0.19
HDLBP-208	ENST00000422080	RRH	O14718	337 aa		13.86	□□□□□ -0.19
HDLBP-208	ENST00000422080	PDCD5	O14737	125 aa		13.86	□□□□□ -0.19
HDLBP-208	ENST00000422080	ATP6V0E1	O15342	81 aa		13.86	□□□□□ -0.19
HDLBP-208	ENST00000422080	RBBP9	O75884	186 aa		13.86	□□□□□ -0.19
HDLBP-208	ENST00000422080	RAB25	P57735	213 aa		13.86	□□□□□ -0.19
HDLBP-208	ENST00000422080	KIAA0141	Q14154	515 aa	Predicted RBP	13.86	□□□□□ -0.19
HDLBP-208	ENST00000422080	SSX1	Q16384	188 aa		13.86	□□□□□ -0.19
HDLBP-208	ENST00000422080	DEFB136	Q30KP8	78 aa		13.86	□□□□□ -0.19
HDLBP-208	ENST00000422080	KLK15	Q9H2R5	256 aa		13.86	□□□□□ -0.19
HDLBP-208	ENST00000422080	PARP11	Q9NR21	331 aa		13.86	□□□□□ -0.19
HDLBP-208	ENST00000422080	WASHC3	Q9Y3C0	194 aa		13.86	□□□□□ -0.19
HDLBP-208	ENST00000422080	TRDV1	A0A1B0GX56	115 aa		13.85	□□□□□ -0.19
HDLBP-208	ENST00000422080	ERICH4	A6NGS2	130 aa		13.85	□□□□□ -0.19
HDLBP-208	ENST00000422080	MRPS14	O60783	128 aa	Known RBP	13.85	□□□□□ -0.19
HDLBP-208	ENST00000422080	GSTP1	P09211	210 aa	Known RBP	13.85	□□□□□ -0.19
HDLBP-208	ENST00000422080	DGCR2	P98153	550 aa		13.85	□□□□□ -0.19
HDLBP-208	ENST00000422080	RUNX1	Q01196	453 aa		13.85	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms