RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 SYNGR2O43760 224 aa11.25□□□□□ -0.61
MCF2L-213ENST00000421756 OR2C1O95371 312 aa11.25□□□□□ -0.61
MCF2L-213ENST00000421756 PTAFRP25105 342 aa11.25□□□□□ -0.61
MCF2L-213ENST00000421756 UCP1P25874 307 aa11.25□□□□□ -0.61
MCF2L-213ENST00000421756 NMSQ5H8A3 153 aa11.25□□□□□ -0.61
MCF2L-213ENST00000421756 DHRS7BQ6IAN0 325 aaPredicted RBP11.25□□□□□ -0.61
MCF2L-213ENST00000421756 CLEC18CQ8NCF0 446 aa11.25□□□□□ -0.61
MCF2L-213ENST00000421756 HIST1H2BAQ96A08 127 aa11.25□□□□□ -0.61
MCF2L-213ENST00000421756 TECTBQ96PL2 329 aa11.25□□□□□ -0.61
MCF2L-213ENST00000421756 GINS3Q9BRX5 216 aa11.25□□□□□ -0.61
MCF2L-213ENST00000421756 COLCA2A8K830 154 aa11.25□□□□□ -0.61
MCF2L-213ENST00000421756 S1PR2O95136 353 aa11.25□□□□□ -0.61
MCF2L-213ENST00000421756 CECR9P0C854 216 aa11.25□□□□□ -0.61
MCF2L-213ENST00000421756 PAX9P55771 341 aa11.25□□□□□ -0.61
MCF2L-213ENST00000421756 EIF3IQ13347 325 aaKnown RBP11.25□□□□□ -0.61
MCF2L-213ENST00000421756 DBX2Q6ZNG2 339 aa11.25□□□□□ -0.61
MCF2L-213ENST00000421756 ODF3L1Q8IXM7 274 aa11.25□□□□□ -0.61
MCF2L-213ENST00000421756 LRRC29Q8WV35 223 aa11.25□□□□□ -0.61
MCF2L-213ENST00000421756 C17orf98A8MV24 154 aa11.25□□□□□ -0.61
MCF2L-213ENST00000421756 HBZP02008 142 aa11.25□□□□□ -0.61
MCF2L-213ENST00000421756 EGR1P18146 543 aa11.25□□□□□ -0.61
MCF2L-213ENST00000421756 UCP3P55916 312 aa11.25□□□□□ -0.61
MCF2L-213ENST00000421756 RAB5BP61020 215 aa11.25□□□□□ -0.61
MCF2L-213ENST00000421756 COL10A1Q03692 680 aa11.25□□□□□ -0.61
MCF2L-213ENST00000421756 UTF1Q5T230 341 aa11.25□□□□□ -0.61
MCF2L-213ENST00000421756 Q6P435 159 aa11.25□□□□□ -0.61
MCF2L-213ENST00000421756 GALMQ96C23 342 aa11.25□□□□□ -0.61
MCF2L-213ENST00000421756 H3BQ15 152 aa11.24□□□□□ -0.61
MCF2L-213ENST00000421756 IFNA17P01571 189 aa11.24□□□□□ -0.61
MCF2L-213ENST00000421756 SRPXP78539 464 aa11.24□□□□□ -0.61
MCF2L-213ENST00000421756 PRB3Q04118 309 aaPredicted RBP11.24□□□□□ -0.61
MCF2L-213ENST00000421756 FABP9Q0Z7S8 132 aa11.24□□□□□ -0.61
MCF2L-213ENST00000421756 OR13A1Q8NGR1 328 aa11.24□□□□□ -0.61
MCF2L-213ENST00000421756 RPUSD4Q96CM3 377 aaKnown RBP11.24□□□□□ -0.61
MCF2L-213ENST00000421756 RNF122Q9H9V4 155 aa11.24□□□□□ -0.61
MCF2L-213ENST00000421756 H1FOOQ8IZA3 346 aaPredicted RBP11.24□□□□□ -0.61
MCF2L-213ENST00000421756 GATAD1Q8WUU5 269 aa11.24□□□□□ -0.61
MCF2L-213ENST00000421756 TMEM56Q96MV1 263 aa11.24□□□□□ -0.61
MCF2L-213ENST00000421756 POLDIP2Q9Y2S7 368 aa11.24□□□□□ -0.61
MCF2L-213ENST00000421756 TMEM56-RWDD3S4R434 201 aa11.24□□□□□ -0.61
MCF2L-213ENST00000421756 K7EM74 188 aa11.23□□□□□ -0.61
MCF2L-213ENST00000421756 HNF1AP20823 631 aa11.23□□□□□ -0.61
MCF2L-213ENST00000421756 IL24Q13007 206 aa11.23□□□□□ -0.61
MCF2L-213ENST00000421756 EIF2S3LQ2VIR3 472 aaKnown RBP11.23□□□□□ -0.61
MCF2L-213ENST00000421756 ZNF429Q86V71 674 aa11.23□□□□□ -0.61
MCF2L-213ENST00000421756 OR4C12Q96R67 309 aa11.23□□□□□ -0.61
MCF2L-213ENST00000421756 MRPS18CQ9Y3D5 142 aaKnown RBP11.23□□□□□ -0.61
MCF2L-213ENST00000421756 LRP5LA4QPB2 252 aa11.23□□□□□ -0.61
MCF2L-213ENST00000421756 K7N7A8 449 aa11.23□□□□□ -0.61
MCF2L-213ENST00000421756 ZG16O60844 167 aa11.23□□□□□ -0.61
MCF2L-213ENST00000421756 KIR2DL2P43627 348 aaPredicted RBP11.23□□□□□ -0.61
MCF2L-213ENST00000421756 UBE2G2P60604 165 aa11.23□□□□□ -0.61
MCF2L-213ENST00000421756 BAXQ07812 192 aa11.23□□□□□ -0.61
MCF2L-213ENST00000421756 DUX4L9Q6RFH8 374 aaPredicted RBP11.23□□□□□ -0.61
MCF2L-213ENST00000421756 SSX7Q7RTT5 188 aa11.23□□□□□ -0.61
MCF2L-213ENST00000421756 LINC00518Q8N0U6 118 aa11.23□□□□□ -0.61
MCF2L-213ENST00000421756 RAB39BQ96DA2 213 aa11.23□□□□□ -0.61
MCF2L-213ENST00000421756 BIN3Q9NQY0 253 aa11.23□□□□□ -0.61
MCF2L-213ENST00000421756 H0Y980 276 aa11.23□□□□□ -0.61
MCF2L-213ENST00000421756 FCGR3BO75015 233 aa11.23□□□□□ -0.61
MCF2L-213ENST00000421756 YIF1AO95070 293 aa11.23□□□□□ -0.61
MCF2L-213ENST00000421756 SNRPCP09234 159 aaKnown RBP11.23□□□□□ -0.61
MCF2L-213ENST00000421756 CTXN2P0C2S0 81 aa11.23□□□□□ -0.61
MCF2L-213ENST00000421756 ID3Q02535 119 aa11.23□□□□□ -0.61
MCF2L-213ENST00000421756 GABRA6Q16445 453 aa11.23□□□□□ -0.61
MCF2L-213ENST00000421756 ZNF585BQ52M93 769 aa11.23□□□□□ -0.61
MCF2L-213ENST00000421756 LRTM2Q8N967 370 aa11.23□□□□□ -0.61
MCF2L-213ENST00000421756 TAAR6Q96RI8 345 aa11.23□□□□□ -0.61
MCF2L-213ENST00000421756 ZNF71Q9NQZ8 489 aaPredicted RBP11.23□□□□□ -0.61
MCF2L-213ENST00000421756 ZNRD1Q9P1U0 126 aa11.23□□□□□ -0.61
MCF2L-213ENST00000421756 HABP2Q14520 560 aaPredicted RBP11.22□□□□□ -0.61
MCF2L-213ENST00000421756 ZNF528Q3MIS6 628 aa11.22□□□□□ -0.61
MCF2L-213ENST00000421756 PLA2G2CQ5R387 149 aa11.22□□□□□ -0.61
MCF2L-213ENST00000421756 ZNF787Q6DD87 383 aa11.22□□□□□ -0.61
MCF2L-213ENST00000421756 TGIF2LYQ8IUE0 185 aa11.22□□□□□ -0.61
MCF2L-213ENST00000421756 FAM185AQ8N0U4 392 aa11.22□□□□□ -0.61
MCF2L-213ENST00000421756 GMPPAQ96IJ6 420 aaPredicted RBP11.22□□□□□ -0.61
MCF2L-213ENST00000421756 ZNF98A6NK75 572 aa11.22□□□□□ -0.61
MCF2L-213ENST00000421756 NDUFA6P56556 154 aa11.22□□□□□ -0.61
MCF2L-213ENST00000421756 RAB2AP61019 212 aa11.22□□□□□ -0.61
MCF2L-213ENST00000421756 DLK1P80370 383 aa11.22□□□□□ -0.61
MCF2L-213ENST00000421756 ZNF880Q6PDB4 577 aa11.22□□□□□ -0.61
MCF2L-213ENST00000421756 MOGAT3Q86VF5 341 aa11.22□□□□□ -0.61
MCF2L-213ENST00000421756 PLSCR2Q9NRY7 297 aa11.22□□□□□ -0.61
MCF2L-213ENST00000421756 GNG10P50151 68 aa11.22□□□□□ -0.61
MCF2L-213ENST00000421756 RPL39P5Q59GN2 51 aa11.22□□□□□ -0.61
MCF2L-213ENST00000421756 ATP5SQ99766 215 aa11.22□□□□□ -0.61
MCF2L-213ENST00000421756 TGIF2-C20orf24A0A0A6YYL0 155 aa11.21□□□□□ -0.61
MCF2L-213ENST00000421756 OR5D13Q8NGL4 314 aa11.21□□□□□ -0.61
MCF2L-213ENST00000421756 SNRNP40Q96DI7 357 aaKnown RBP11.21□□□□□ -0.61
MCF2L-213ENST00000421756 DCAF16Q9NXF7 216 aa11.21□□□□□ -0.61
MCF2L-213ENST00000421756 A0A0U1RQK1 487 aa11.21□□□□□ -0.62
MCF2L-213ENST00000421756 KLK10O43240 276 aa11.21□□□□□ -0.62
MCF2L-213ENST00000421756 PITX3O75364 302 aa11.21□□□□□ -0.62
MCF2L-213ENST00000421756 IGLV2-14P01704 120 aa11.21□□□□□ -0.62
MCF2L-213ENST00000421756 ZNF883P0CG24 379 aa11.21□□□□□ -0.62
MCF2L-213ENST00000421756 GCSAMLQ5JQS6 135 aa11.21□□□□□ -0.62
MCF2L-213ENST00000421756 SPSB3Q6PJ21 355 aa11.21□□□□□ -0.62
MCF2L-213ENST00000421756 FAM157AC9JC47 383 aa11.21□□□□□ -0.62
MCF2L-213ENST00000421756 LHX4Q969G2 390 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms