RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 TMEM45BQ96B21 275 aa10.71□□□□□ -0.7
CLCN4-203ENST00000421085 GPR146Q96CH1 333 aa10.71□□□□□ -0.7
CLCN4-203ENST00000421085 ZNF385AQ96PM9 386 aaKnown RBP10.71□□□□□ -0.7
CLCN4-203ENST00000421085 GPHA2Q96T91 129 aa10.71□□□□□ -0.7
CLCN4-203ENST00000421085 SMCHD1A6NHR9 2005 aa10.71□□□□□ -0.7
CLCN4-203ENST00000421085 TRBV5-7A0A0A0MS05 114 aa10.71□□□□□ -0.7
CLCN4-203ENST00000421085 HYPMO75409 117 aa10.71□□□□□ -0.7
CLCN4-203ENST00000421085 PEBP1P30086 187 aaKnown RBP10.71□□□□□ -0.7
CLCN4-203ENST00000421085 CKS2P33552 79 aa10.71□□□□□ -0.7
CLCN4-203ENST00000421085 MIC13Q5XKP0 118 aa10.71□□□□□ -0.7
CLCN4-203ENST00000421085 TMEM136Q6ZRR5 245 aa10.71□□□□□ -0.7
CLCN4-203ENST00000421085 NFAM1Q8NET5 270 aaPredicted RBP10.71□□□□□ -0.7
CLCN4-203ENST00000421085 SLC25A40Q8TBP6 338 aa10.71□□□□□ -0.7
CLCN4-203ENST00000421085 PGLYRP1O75594 196 aaPredicted RBP10.7□□□□□ -0.7
CLCN4-203ENST00000421085 COL10A1Q03692 680 aa10.7□□□□□ -0.7
CLCN4-203ENST00000421085 LHX8Q68G74 356 aa10.7□□□□□ -0.7
CLCN4-203ENST00000421085 SFTPA2Q8IWL1 248 aa10.7□□□□□ -0.7
CLCN4-203ENST00000421085 ITGB4P16144 1822 aa10.7□□□□□ -0.7
CLCN4-203ENST00000421085 A0A0U1RQV5 110 aa10.7□□□□□ -0.7
CLCN4-203ENST00000421085 ZNF735P0CB33 412 aa10.7□□□□□ -0.7
CLCN4-203ENST00000421085 LAMTOR1Q6IAA8 161 aa10.7□□□□□ -0.7
CLCN4-203ENST00000421085 LINC00469Q8N7U9 141 aa10.7□□□□□ -0.7
CLCN4-203ENST00000421085 HLA-DRB1P01911 266 aa10.7□□□□□ -0.7
CLCN4-203ENST00000421085 FUT5Q11128 374 aa10.7□□□□□ -0.7
CLCN4-203ENST00000421085 BHLHA15Q7RTS1 189 aaPredicted RBP10.7□□□□□ -0.7
CLCN4-203ENST00000421085 ABHD14BQ96IU4 210 aa10.7□□□□□ -0.7
CLCN4-203ENST00000421085 A8MXK9 166 aa10.7□□□□□ -0.7
CLCN4-203ENST00000421085 PRSS53Q2L4Q9 553 aa10.7□□□□□ -0.7
CLCN4-203ENST00000421085 CLEC1BQ9P126 229 aa10.7□□□□□ -0.7
CLCN4-203ENST00000421085 CARHSP1Q9Y2V2 147 aaKnown RBP10.7□□□□□ -0.7
CLCN4-203ENST00000421085 INSIG2Q9Y5U4 225 aa10.7□□□□□ -0.7
CLCN4-203ENST00000421085 DNPH1O43598 174 aa10.7□□□□□ -0.7
CLCN4-203ENST00000421085 ARL14EPLP0DKL9 152 aa10.7□□□□□ -0.7
CLCN4-203ENST00000421085 CCL3P10147 92 aa10.7□□□□□ -0.7
CLCN4-203ENST00000421085 REG1BP48304 166 aa10.7□□□□□ -0.7
CLCN4-203ENST00000421085 RPS11P62280 158 aaKnown RBP eCLIP10.7□□□□□ -0.7
CLCN4-203ENST00000421085 C1orf100Q5SVJ3 147 aa10.7□□□□□ -0.7
CLCN4-203ENST00000421085 ATRAIDQ6UW56 229 aa10.7□□□□□ -0.7
CLCN4-203ENST00000421085 RNF7Q9UBF6 113 aa10.7□□□□□ -0.7
CLCN4-203ENST00000421085 TMEM210A6NLX4 147 aa10.69□□□□□ -0.7
CLCN4-203ENST00000421085 CEACAM18A8MTB9 384 aa10.69□□□□□ -0.7
CLCN4-203ENST00000421085 MAGEA5P43359 124 aa10.69□□□□□ -0.7
CLCN4-203ENST00000421085 EFNB1P98172 346 aa10.69□□□□□ -0.7
CLCN4-203ENST00000421085 ADIPOQQ15848 244 aa10.69□□□□□ -0.7
CLCN4-203ENST00000421085 KRTCAP3Q53RY4 240 aa10.69□□□□□ -0.7
CLCN4-203ENST00000421085 ZNF506Q5JVG8 444 aa10.69□□□□□ -0.7
CLCN4-203ENST00000421085 MRPL13Q9BYD1 178 aaKnown RBP10.69□□□□□ -0.7
CLCN4-203ENST00000421085 ZDHHC8Q9ULC8 765 aa10.69□□□□□ -0.7
CLCN4-203ENST00000421085 DXOO77932 396 aaKnown RBP10.69□□□□□ -0.7
CLCN4-203ENST00000421085 CD8AP01732 235 aa10.69□□□□□ -0.7
CLCN4-203ENST00000421085 ISG15P05161 165 aa10.69□□□□□ -0.7
CLCN4-203ENST00000421085 ZP4Q12836 540 aa10.69□□□□□ -0.7
CLCN4-203ENST00000421085 TPRX1Q8N7U7 411 aa10.69□□□□□ -0.7
CLCN4-203ENST00000421085 OR5R1Q8NH85 324 aa10.69□□□□□ -0.7
CLCN4-203ENST00000421085 SFRP2Q96HF1 295 aa10.69□□□□□ -0.7
CLCN4-203ENST00000421085 ZNF324O75467 553 aaPredicted RBP10.69□□□□□ -0.7
CLCN4-203ENST00000421085 PLAUP00749 431 aa10.69□□□□□ -0.7
CLCN4-203ENST00000421085 COX6CP09669 75 aa10.69□□□□□ -0.7
CLCN4-203ENST00000421085 PRF1P14222 555 aa10.69□□□□□ -0.7
CLCN4-203ENST00000421085 CALHM1Q8IU99 346 aa10.69□□□□□ -0.7
CLCN4-203ENST00000421085 FGF12P61328 243 aa10.69□□□□□ -0.7
CLCN4-203ENST00000421085 UNQ9370/PRO34162Q6UXP9 181 aa10.69□□□□□ -0.7
CLCN4-203ENST00000421085 POC1AQ8NBT0 407 aa10.69□□□□□ -0.7
CLCN4-203ENST00000421085 SCN7AQ01118 1682 aa10.69□□□□□ -0.7
CLCN4-203ENST00000421085 ZNF645Q8N7E2 425 aa10.68□□□□□ -0.7
CLCN4-203ENST00000421085 OR2Y1Q8NGV0 311 aa10.68□□□□□ -0.7
CLCN4-203ENST00000421085 CLDN14O95500 239 aa10.68□□□□□ -0.7
CLCN4-203ENST00000421085 LINC00869P0C866 280 aa10.68□□□□□ -0.7
CLCN4-203ENST00000421085 MAS1LP35410 378 aa10.68□□□□□ -0.7
CLCN4-203ENST00000421085 ROM1Q03395 351 aa10.68□□□□□ -0.7
CLCN4-203ENST00000421085 LRRC75BQ2VPJ9 315 aa10.68□□□□□ -0.7
CLCN4-203ENST00000421085 GAB4Q2WGN9 574 aa10.68□□□□□ -0.7
CLCN4-203ENST00000421085 FGFRL1Q8N441 504 aa10.68□□□□□ -0.7
CLCN4-203ENST00000421085 ZNF721Q8TF20 911 aa10.68□□□□□ -0.7
CLCN4-203ENST00000421085 NEU1Q99519 415 aa10.68□□□□□ -0.7
CLCN4-203ENST00000421085 DOCK2Q92608 1830 aa10.68□□□□□ -0.7
CLCN4-203ENST00000421085 PGPA6NDG6 321 aa10.68□□□□□ -0.7
CLCN4-203ENST00000421085 K7EQS6 105 aa10.68□□□□□ -0.7
CLCN4-203ENST00000421085 NUBP1P53384 320 aa10.68□□□□□ -0.7
CLCN4-203ENST00000421085 TMUB1Q9BVT8 246 aa10.68□□□□□ -0.7
CLCN4-203ENST00000421085 HSPB7Q9UBY9 170 aa10.68□□□□□ -0.7
CLCN4-203ENST00000421085 SSTR5P35346 364 aa10.68□□□□□ -0.7
CLCN4-203ENST00000421085 NPBWR2P48146 333 aa10.68□□□□□ -0.7
CLCN4-203ENST00000421085 CEACAM21Q3KPI0 293 aa10.68□□□□□ -0.7
CLCN4-203ENST00000421085 ST6GALNAC3Q8NDV1 305 aa10.68□□□□□ -0.7
CLCN4-203ENST00000421085 EMP1P54849 157 aa10.68□□□□□ -0.7
CLCN4-203ENST00000421085 ALS2Q96Q42 1657 aa10.68□□□□□ -0.7
CLCN4-203ENST00000421085 DPRXA6NFQ7 191 aa10.67□□□□□ -0.7
CLCN4-203ENST00000421085 MMD2Q8IY49 270 aa10.67□□□□□ -0.7
CLCN4-203ENST00000421085 KNL1Q8NG31 2342 aa10.67□□□□□ -0.7
CLCN4-203ENST00000421085 NHSQ6T4R5 1651 aa10.67□□□□□ -0.7
CLCN4-203ENST00000421085 ARAP2Q8WZ64 1704 aa10.67□□□□□ -0.7
CLCN4-203ENST00000421085 CRYBB3P26998 211 aa10.67□□□□□ -0.7
CLCN4-203ENST00000421085 TEX30Q5JUR7 227 aa10.67□□□□□ -0.7
CLCN4-203ENST00000421085 OR2I1PQ8NGU4 316 aa10.67□□□□□ -0.7
CLCN4-203ENST00000421085 WNT10AQ9GZT5 417 aa10.67□□□□□ -0.7
CLCN4-203ENST00000421085 BRWD1Q9NSI6 2320 aa10.67□□□□□ -0.7
CLCN4-203ENST00000421085 CBLN1P23435 193 aa10.67□□□□□ -0.7
CLCN4-203ENST00000421085 UNC119Q13432 240 aa10.67□□□□□ -0.7
CLCN4-203ENST00000421085 TMEM177Q53S58 311 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms