RNA–Protein interactions for RNA: ENST00000420973.5

CHRD-204, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 3,492 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-204ENST00000420973 RBMXP38159 391 aaKnown RBP12.47□□□□□ -0.41
CHRD-204ENST00000420973 GTF3C1Q12789 2109 aa12.47□□□□□ -0.41
CHRD-204ENST00000420973 SPATA45Q537H7 98 aa12.47□□□□□ -0.41
CHRD-204ENST00000420973 NIT1Q86X76 327 aa12.47□□□□□ -0.41
CHRD-204ENST00000420973 ZDHHC22Q8N966 263 aa12.47□□□□□ -0.41
CHRD-204ENST00000420973 OR2V1Q8NHB1 315 aa12.47□□□□□ -0.41
CHRD-204ENST00000420973 OSGIN2Q9Y236 505 aa12.47□□□□□ -0.41
CHRD-204ENST00000420973 TRAV39A0A0B4J263 110 aa12.47□□□□□ -0.41
CHRD-204ENST00000420973 OR7C2O60412 319 aa12.47□□□□□ -0.41
CHRD-204ENST00000420973 SAP30O75446 220 aa12.47□□□□□ -0.41
CHRD-204ENST00000420973 VSIG8P0DPA2 414 aa12.47□□□□□ -0.41
CHRD-204ENST00000420973 OPRM1P35372 400 aa12.47□□□□□ -0.41
CHRD-204ENST00000420973 TSPO2Q5TGU0 170 aa12.47□□□□□ -0.41
CHRD-204ENST00000420973 FADS6Q8N9I5 356 aa12.47□□□□□ -0.41
CHRD-204ENST00000420973 LYPD6BQ8NI32 183 aa12.47□□□□□ -0.41
CHRD-204ENST00000420973 IGHV2OR16-5A0A0B4J2B6 119 aa12.46□□□□□ -0.41
CHRD-204ENST00000420973 SYNGR4O95473 234 aa12.46□□□□□ -0.41
CHRD-204ENST00000420973 DUSP1P28562 367 aa12.46□□□□□ -0.41
CHRD-204ENST00000420973 MC5RP33032 325 aa12.46□□□□□ -0.41
CHRD-204ENST00000420973 CMTM2Q8TAZ6 248 aa12.46□□□□□ -0.41
CHRD-204ENST00000420973 CHODLQ9H9P2 273 aa12.46□□□□□ -0.41
CHRD-204ENST00000420973 RAB18Q9NP72 206 aa12.46□□□□□ -0.41
CHRD-204ENST00000420973 B4GALT7Q9UBV7 327 aa12.46□□□□□ -0.41
CHRD-204ENST00000420973 GJE1A6NN92 205 aa12.46□□□□□ -0.41
CHRD-204ENST00000420973 GAPDHP04406 335 aaKnown RBP12.46□□□□□ -0.41
CHRD-204ENST00000420973 ACOT6Q3I5F7 207 aaPredicted RBP12.46□□□□□ -0.41
CHRD-204ENST00000420973 SLC25A47Q6Q0C1 308 aa12.46□□□□□ -0.41
CHRD-204ENST00000420973 MYPOPQ86VE0 399 aaPredicted RBP12.46□□□□□ -0.41
CHRD-204ENST00000420973 CALHM1Q8IU99 346 aa12.46□□□□□ -0.41
CHRD-204ENST00000420973 CNEP1R1Q8N9A8 125 aa12.46□□□□□ -0.41
CHRD-204ENST00000420973 OR52L2PQ8NGH6 319 aa12.46□□□□□ -0.41
CHRD-204ENST00000420973 FGFBP3Q8TAT2 258 aa12.46□□□□□ -0.41
CHRD-204ENST00000420973 STARD4Q96DR4 205 aa12.46□□□□□ -0.41
CHRD-204ENST00000420973 ATP5SQ99766 215 aa12.46□□□□□ -0.41
CHRD-204ENST00000420973 HEATR1Q9H583 2144 aaKnown RBP12.46□□□□□ -0.41
CHRD-204ENST00000420973 CDH20Q9HBT6 801 aa12.46□□□□□ -0.41
CHRD-204ENST00000420973 ZNF292O60281 2723 aa12.46□□□□□ -0.42
CHRD-204ENST00000420973 GALR1P47211 349 aa12.46□□□□□ -0.42
CHRD-204ENST00000420973 SLAQ13239 276 aa12.46□□□□□ -0.42
CHRD-204ENST00000420973 TMEM241Q24JQ0 296 aa12.46□□□□□ -0.42
CHRD-204ENST00000420973 FAM89BQ8N5H3 189 aa12.46□□□□□ -0.42
CHRD-204ENST00000420973 SPTSSAQ969W0 71 aa12.46□□□□□ -0.42
CHRD-204ENST00000420973 ARHGAP5-AS1Q96IT6 56 aa12.46□□□□□ -0.42
CHRD-204ENST00000420973 FOXB1Q99853 325 aa12.46□□□□□ -0.42
CHRD-204ENST00000420973 TMEM106BQ9NUM4 274 aa12.46□□□□□ -0.42
CHRD-204ENST00000420973 WIPI2Q9Y4P8 454 aa12.46□□□□□ -0.42
CHRD-204ENST00000420973 TRBV24-1A0A075B6N3 115 aa12.45□□□□□ -0.42
CHRD-204ENST00000420973 SRD5A2P31213 254 aa12.45□□□□□ -0.42
CHRD-204ENST00000420973 OR10W1Q8NGF6 305 aa12.45□□□□□ -0.42
CHRD-204ENST00000420973 TMEM186Q96B77 213 aa12.45□□□□□ -0.42
CHRD-204ENST00000420973 UQCR10Q9UDW1 63 aa12.45□□□□□ -0.42
CHRD-204ENST00000420973 AKAP13Q12802 2813 aa12.45□□□□□ -0.42
CHRD-204ENST00000420973 MED13LQ71F56 2210 aa12.45□□□□□ -0.42
CHRD-204ENST00000420973 B4DEV8 164 aa12.45□□□□□ -0.42
CHRD-204ENST00000420973 ZNF708P17019 499 aa12.45□□□□□ -0.42
CHRD-204ENST00000420973 AMY2BP19961 511 aa12.45□□□□□ -0.42
CHRD-204ENST00000420973 GABRA2P47869 451 aa12.45□□□□□ -0.42
CHRD-204ENST00000420973 RAC3P60763 192 aa12.45□□□□□ -0.42
CHRD-204ENST00000420973 SSBP1Q04837 148 aaKnown RBP12.45□□□□□ -0.42
CHRD-204ENST00000420973 SMAGPQ0VAQ4 97 aa12.45□□□□□ -0.42
CHRD-204ENST00000420973 ANKRD55Q3KP44 614 aa12.45□□□□□ -0.42
CHRD-204ENST00000420973 OR4D5Q8NGN0 318 aa12.45□□□□□ -0.42
CHRD-204ENST00000420973 SHANK1Q9Y566 2161 aa12.45□□□□□ -0.42
CHRD-204ENST00000420973 TRAV30A0A087WSZ9 112 aa12.45□□□□□ -0.42
CHRD-204ENST00000420973 GRIFINA4D1Z8 144 aa12.45□□□□□ -0.42
CHRD-204ENST00000420973 MT-CO2P00403 227 aa12.45□□□□□ -0.42
CHRD-204ENST00000420973 CDKN1AP38936 164 aa12.45□□□□□ -0.42
CHRD-204ENST00000420973 OR2M7Q8NG81 312 aa12.45□□□□□ -0.42
CHRD-204ENST00000420973 AQP3Q92482 292 aa12.45□□□□□ -0.42
CHRD-204ENST00000420973 PSMF1Q92530 271 aa12.45□□□□□ -0.42
CHRD-204ENST00000420973 HDHD3Q9BSH5 251 aaPredicted RBP12.45□□□□□ -0.42
CHRD-204ENST00000420973 EHFQ9NZC4 300 aa12.45□□□□□ -0.42
CHRD-204ENST00000420973 PLCE1Q9P212 2302 aa12.44□□□□□ -0.42
CHRD-204ENST00000420973 C5orf49A4QMS7 147 aa12.44□□□□□ -0.42
CHRD-204ENST00000420973 MAP1LC3B2A6NCE7 125 aa12.44□□□□□ -0.42
CHRD-204ENST00000420973 LRRC3CA6NJW4 275 aa12.44□□□□□ -0.42
CHRD-204ENST00000420973 SLC33A1O00400 549 aaPredicted RBP12.44□□□□□ -0.42
CHRD-204ENST00000420973 TOX4O94842 621 aa12.44□□□□□ -0.42
CHRD-204ENST00000420973 KISS1Q15726 138 aa12.44□□□□□ -0.42
CHRD-204ENST00000420973 DTX1Q86Y01 620 aa12.44□□□□□ -0.42
CHRD-204ENST00000420973 MAP1LC3BQ9GZQ8 125 aa12.44□□□□□ -0.42
CHRD-204ENST00000420973 ST3GAL6Q9Y274 331 aa12.44□□□□□ -0.42
CHRD-204ENST00000420973 ATMQ13315 3056 aa12.44□□□□□ -0.42
CHRD-204ENST00000420973 CHRM2P08172 466 aa12.44□□□□□ -0.42
CHRD-204ENST00000420973 MEOX1P50221 254 aa12.44□□□□□ -0.42
CHRD-204ENST00000420973 FXYD4P59646 89 aa12.44□□□□□ -0.42
CHRD-204ENST00000420973 UNC119Q13432 240 aa12.44□□□□□ -0.42
CHRD-204ENST00000420973 C16orf82Q7Z2V1 217 aa12.44□□□□□ -0.42
CHRD-204ENST00000420973 C6orf201Q7Z4U5 140 aa12.44□□□□□ -0.42
CHRD-204ENST00000420973 OR5AS1Q8N127 324 aa12.44□□□□□ -0.42
CHRD-204ENST00000420973 ZIC4Q8N9L1 334 aa12.44□□□□□ -0.42
CHRD-204ENST00000420973 CSNK2A3Q8NEV1 391 aa12.44□□□□□ -0.42
CHRD-204ENST00000420973 SLC7A10Q9NS82 523 aa12.44□□□□□ -0.42
CHRD-204ENST00000420973 IGHMP01871 453 aa12.43□□□□□ -0.42
CHRD-204ENST00000420973 SLC35D1Q9NTN3 355 aa12.43□□□□□ -0.42
CHRD-204ENST00000420973 VSTM5A8MXK1 200 aa12.43□□□□□ -0.42
CHRD-204ENST00000420973 TPPP2P59282 170 aa12.43□□□□□ -0.42
CHRD-204ENST00000420973 PCK2Q16822 640 aa12.43□□□□□ -0.42
CHRD-204ENST00000420973 PLCXD3Q63HM9 321 aa12.43□□□□□ -0.42
CHRD-204ENST00000420973 TMEM251Q8N6I4 163 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms