RNA–Protein interactions for RNA: ENST00000420503.1

LINC00339-203, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-203ENST00000420503 NUBP2Q9Y5Y2 271 aa9.85□□□□□ -0.83
LINC00339-203ENST00000420503 PNMA8CA0A1B0GUJ8 204 aa9.84□□□□□ -0.83
LINC00339-203ENST00000420503 RRHO14718 337 aa9.84□□□□□ -0.83
LINC00339-203ENST00000420503 SC5DO75845 299 aa9.84□□□□□ -0.83
LINC00339-203ENST00000420503 IGLV1-51P01701 117 aa9.84□□□□□ -0.83
LINC00339-203ENST00000420503 CT45A6P0DMU7 189 aa9.84□□□□□ -0.83
LINC00339-203ENST00000420503 CT45A5P0DMU8 189 aa9.84□□□□□ -0.83
LINC00339-203ENST00000420503 CT45A7P0DMV0 189 aa9.84□□□□□ -0.83
LINC00339-203ENST00000420503 ARSBP15848 533 aa9.84□□□□□ -0.83
LINC00339-203ENST00000420503 MGMTP16455 207 aa9.84□□□□□ -0.83
LINC00339-203ENST00000420503 CRIP2P52943 208 aaPredicted RBP9.84□□□□□ -0.83
LINC00339-203ENST00000420503 TPPP2P59282 170 aa9.84□□□□□ -0.83
LINC00339-203ENST00000420503 C6orf141Q5SZD1 244 aa9.84□□□□□ -0.83
LINC00339-203ENST00000420503 AWAT2Q6E213 333 aa9.84□□□□□ -0.83
LINC00339-203ENST00000420503 UNQ5815/PRO19632Q6UWF5 114 aa9.84□□□□□ -0.83
LINC00339-203ENST00000420503 IL34Q6ZMJ4 242 aa9.84□□□□□ -0.83
LINC00339-203ENST00000420503 LYPD6Q86Y78 171 aa9.84□□□□□ -0.83
LINC00339-203ENST00000420503 LFNGQ8NES3 379 aa9.84□□□□□ -0.83
LINC00339-203ENST00000420503 GHSRQ92847 366 aa9.84□□□□□ -0.83
LINC00339-203ENST00000420503 MRPS24Q96EL2 167 aaKnown RBP9.84□□□□□ -0.83
LINC00339-203ENST00000420503 PGLYRP3Q96LB9 341 aa9.84□□□□□ -0.83
LINC00339-203ENST00000420503 Q96M66 194 aa9.84□□□□□ -0.83
LINC00339-203ENST00000420503 OR14A2Q96R54 314 aa9.84□□□□□ -0.83
LINC00339-203ENST00000420503 OR4C12Q96R67 309 aa9.84□□□□□ -0.83
LINC00339-203ENST00000420503 CHCHD6Q9BRQ6 235 aa9.84□□□□□ -0.83
LINC00339-203ENST00000420503 TRBV5-7A0A0A0MS05 114 aa9.83□□□□□ -0.84
LINC00339-203ENST00000420503 ANKRD34BA5PLL1 514 aa9.83□□□□□ -0.84
LINC00339-203ENST00000420503 IZUMO1RA6ND01 250 aa9.83□□□□□ -0.84
LINC00339-203ENST00000420503 OGG1O15527 345 aa9.83□□□□□ -0.84
LINC00339-203ENST00000420503 CRTAPO75718 401 aaPredicted RBP9.83□□□□□ -0.84
LINC00339-203ENST00000420503 TRBV12-3P01733 135 aa9.83□□□□□ -0.84
LINC00339-203ENST00000420503 HSPB1P04792 205 aaKnown RBP9.83□□□□□ -0.84
LINC00339-203ENST00000420503 HSPA13P48723 471 aa9.83□□□□□ -0.84
LINC00339-203ENST00000420503 VEGFCP49767 419 aa9.83□□□□□ -0.84
LINC00339-203ENST00000420503 SSBP2P81877 361 aaPredicted RBP9.83□□□□□ -0.84
LINC00339-203ENST00000420503 MRPL28Q13084 256 aaKnown RBP9.83□□□□□ -0.84
LINC00339-203ENST00000420503 STEAP3Q658P3 488 aa9.83□□□□□ -0.84
LINC00339-203ENST00000420503 DMKNQ6E0U4 476 aaPredicted RBP9.83□□□□□ -0.84
LINC00339-203ENST00000420503 OR10K2Q6IF99 312 aa9.83□□□□□ -0.84
LINC00339-203ENST00000420503 PPP1R27Q86WC6 154 aa9.83□□□□□ -0.84
LINC00339-203ENST00000420503 DRAXINQ8NBI3 349 aaPredicted RBP9.83□□□□□ -0.84
LINC00339-203ENST00000420503 GGHQ92820 318 aa9.83□□□□□ -0.84
LINC00339-203ENST00000420503 SMIM19Q96E16 107 aa9.83□□□□□ -0.84
LINC00339-203ENST00000420503 ABHD14BQ96IU4 210 aa9.83□□□□□ -0.84
LINC00339-203ENST00000420503 RHOVQ96L33 236 aa9.83□□□□□ -0.84
LINC00339-203ENST00000420503 SULT4A1Q9BR01 284 aa9.83□□□□□ -0.84
LINC00339-203ENST00000420503 FKBP14Q9NWM8 211 aa9.83□□□□□ -0.84
LINC00339-203ENST00000420503 PAK1IP1Q9NWT1 392 aaPredicted RBP9.83□□□□□ -0.84
LINC00339-203ENST00000420503 CNOT2Q9NZN8 540 aaKnown RBP9.83□□□□□ -0.84
LINC00339-203ENST00000420503 PSORS1C1Q9UIG5 152 aa9.83□□□□□ -0.84
LINC00339-203ENST00000420503 JPT1Q9UK76 154 aa9.83□□□□□ -0.84
LINC00339-203ENST00000420503 DIMT1Q9UNQ2 313 aaKnown RBP9.83□□□□□ -0.84
LINC00339-203ENST00000420503 H0YJW9 148 aa9.82□□□□□ -0.84
LINC00339-203ENST00000420503 ARPC1BO15143 372 aaKnown RBP9.82□□□□□ -0.84
LINC00339-203ENST00000420503 HSPA12AO43301 675 aa9.82□□□□□ -0.84
LINC00339-203ENST00000420503 YPEL1O60688 119 aa9.82□□□□□ -0.84
LINC00339-203ENST00000420503 ZNF780AO75290 641 aaPredicted RBP9.82□□□□□ -0.84
LINC00339-203ENST00000420503 RBMXL2O75526 392 aaKnown RBP9.82□□□□□ -0.84
LINC00339-203ENST00000420503 CA2P00918 260 aa9.82□□□□□ -0.84
LINC00339-203ENST00000420503 DCKP27707 260 aa9.82□□□□□ -0.84
LINC00339-203ENST00000420503 INSL4Q14641 139 aa9.82□□□□□ -0.84
LINC00339-203ENST00000420503 HMGN3Q15651 99 aa9.82□□□□□ -0.84
LINC00339-203ENST00000420503 ACTBL2Q562R1 376 aa9.82□□□□□ -0.84
LINC00339-203ENST00000420503 ZNF660Q6AZW8 331 aaPredicted RBP9.82□□□□□ -0.84
LINC00339-203ENST00000420503 IL1F10Q8WWZ1 152 aa9.82□□□□□ -0.84
LINC00339-203ENST00000420503 YPEL2Q96QA6 119 aa9.82□□□□□ -0.84
LINC00339-203ENST00000420503 THAP7Q9BT49 309 aaPredicted RBP9.82□□□□□ -0.84
LINC00339-203ENST00000420503 GHITMQ9H3K2 345 aa9.82□□□□□ -0.84
LINC00339-203ENST00000420503 SPACA1Q9HBV2 294 aa9.82□□□□□ -0.84
LINC00339-203ENST00000420503 RAB26Q9ULW5 256 aa9.82□□□□□ -0.84
LINC00339-203ENST00000420503 IRGMA1A4Y4 181 aa9.81□□□□□ -0.84
LINC00339-203ENST00000420503 EFCAB10A6NFE3 127 aa9.81□□□□□ -0.84
LINC00339-203ENST00000420503 A8MZ25 164 aa9.81□□□□□ -0.84
LINC00339-203ENST00000420503 PROP1O75360 226 aa9.81□□□□□ -0.84
LINC00339-203ENST00000420503 GPX5O75715 221 aa9.81□□□□□ -0.84
LINC00339-203ENST00000420503 TRGV3P03979 118 aa9.81□□□□□ -0.84
LINC00339-203ENST00000420503 FSTP19883 344 aa9.81□□□□□ -0.84
LINC00339-203ENST00000420503 FUT3P21217 361 aa9.81□□□□□ -0.84
LINC00339-203ENST00000420503 ST3GAL4Q11206 333 aa9.81□□□□□ -0.84
LINC00339-203ENST00000420503 PLGLAQ15195 96 aa9.81□□□□□ -0.84
LINC00339-203ENST00000420503 TMEM30BQ3MIR4 351 aa9.81□□□□□ -0.84
LINC00339-203ENST00000420503 Q499Y3 187 aa9.81□□□□□ -0.84
LINC00339-203ENST00000420503 CCDC58Q4VC31 144 aa9.81□□□□□ -0.84
LINC00339-203ENST00000420503 CD200R1LQ6Q8B3 271 aa9.81□□□□□ -0.84
LINC00339-203ENST00000420503 C6orf201Q7Z4U5 140 aa9.81□□□□□ -0.84
LINC00339-203ENST00000420503 SGPP2Q8IWX5 399 aa9.81□□□□□ -0.84
LINC00339-203ENST00000420503 ZNF485Q8NCK3 441 aa9.81□□□□□ -0.84
LINC00339-203ENST00000420503 BPIFB6Q8NFQ5 453 aa9.81□□□□□ -0.84
LINC00339-203ENST00000420503 OR2AK2Q8NG84 335 aa9.81□□□□□ -0.84
LINC00339-203ENST00000420503 GRPEL2Q8TAA5 225 aa9.81□□□□□ -0.84
LINC00339-203ENST00000420503 TMEM80Q96HE8 168 aa9.81□□□□□ -0.84
LINC00339-203ENST00000420503 SPATA25Q9BR10 227 aa9.81□□□□□ -0.84
LINC00339-203ENST00000420503 NICN1Q9BSH3 213 aa9.81□□□□□ -0.84
LINC00339-203ENST00000420503 HDHD3Q9BSH5 251 aaPredicted RBP9.81□□□□□ -0.84
LINC00339-203ENST00000420503 FAAP24Q9BTP7 215 aa9.81□□□□□ -0.84
LINC00339-203ENST00000420503 CST11Q9H112 138 aa9.81□□□□□ -0.84
LINC00339-203ENST00000420503 BABAM2Q9NXR7 383 aa9.81□□□□□ -0.84
LINC00339-203ENST00000420503 OR1A1Q9P1Q5 309 aa9.81□□□□□ -0.84
LINC00339-203ENST00000420503 METTL1Q9UBP6 276 aaKnown RBP9.81□□□□□ -0.84
LINC00339-203ENST00000420503 STUB1Q9UNE7 303 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms