RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 ABHD5Q8WTS1 349 aa11.18□□□□□ -0.62
PAF1-202ENST00000416728 ALX4Q9H161 411 aaPredicted RBP11.18□□□□□ -0.62
PAF1-202ENST00000416728 FBXL15Q9H469 300 aa11.18□□□□□ -0.62
PAF1-202ENST00000416728 FBXO7Q9Y3I1 522 aa11.18□□□□□ -0.62
PAF1-202ENST00000416728 A3GALT2U3KPV4 340 aa11.18□□□□□ -0.62
PAF1-202ENST00000416728 OR5H14A6NHG9 310 aa11.17□□□□□ -0.62
PAF1-202ENST00000416728 LINC01619G3V211 115 aa11.17□□□□□ -0.62
PAF1-202ENST00000416728 RRHO14718 337 aa11.17□□□□□ -0.62
PAF1-202ENST00000416728 SOX15O60248 233 aa11.17□□□□□ -0.62
PAF1-202ENST00000416728 GNAO1P09471 354 aa11.17□□□□□ -0.62
PAF1-202ENST00000416728 HTR2CP28335 458 aa11.17□□□□□ -0.62
PAF1-202ENST00000416728 CRIP2P52943 208 aaPredicted RBP11.17□□□□□ -0.62
PAF1-202ENST00000416728 SLURP1P55000 103 aa11.17□□□□□ -0.62
PAF1-202ENST00000416728 CX3CL1P78423 397 aa11.17□□□□□ -0.62
PAF1-202ENST00000416728 INSL4Q14641 139 aa11.17□□□□□ -0.62
PAF1-202ENST00000416728 RPL39P5Q59GN2 51 aa11.17□□□□□ -0.62
PAF1-202ENST00000416728 C19orf54Q5BKX5 351 aa11.17□□□□□ -0.62
PAF1-202ENST00000416728 RBM48Q5RL73 367 aaKnown RBP11.17□□□□□ -0.62
PAF1-202ENST00000416728 LAIR2Q6ISS4 152 aa11.17□□□□□ -0.62
PAF1-202ENST00000416728 MOB1BQ7L9L4 216 aa11.17□□□□□ -0.62
PAF1-202ENST00000416728 MS4A15Q8N5U1 240 aa11.17□□□□□ -0.62
PAF1-202ENST00000416728 BPIFB6Q8NFQ5 453 aa11.17□□□□□ -0.62
PAF1-202ENST00000416728 KCNG3Q8TAE7 436 aa11.17□□□□□ -0.62
PAF1-202ENST00000416728 SETD6Q8TBK2 473 aa11.17□□□□□ -0.62
PAF1-202ENST00000416728 DLX4Q92988 240 aaPredicted RBP11.17□□□□□ -0.62
PAF1-202ENST00000416728 TOLLIPQ9H0E2 274 aa11.17□□□□□ -0.62
PAF1-202ENST00000416728 GHITMQ9H3K2 345 aa11.17□□□□□ -0.62
PAF1-202ENST00000416728 PLCXD1Q9NUJ7 323 aa11.17□□□□□ -0.62
PAF1-202ENST00000416728 SLC23A1Q9UHI7 598 aa11.17□□□□□ -0.62
PAF1-202ENST00000416728 H7C2Y5 167 aa11.16□□□□□ -0.62
PAF1-202ENST00000416728 NAPSAO96009 420 aa11.16□□□□□ -0.62
PAF1-202ENST00000416728 GSTP1P09211 210 aaKnown RBP11.16□□□□□ -0.62
PAF1-202ENST00000416728 LGALS1P09382 135 aaKnown RBP11.16□□□□□ -0.62
PAF1-202ENST00000416728 CT45A6P0DMU7 189 aa11.16□□□□□ -0.62
PAF1-202ENST00000416728 CT45A5P0DMU8 189 aa11.16□□□□□ -0.62
PAF1-202ENST00000416728 CT45A7P0DMV0 189 aa11.16□□□□□ -0.62
PAF1-202ENST00000416728 MC5RP33032 325 aa11.16□□□□□ -0.62
PAF1-202ENST00000416728 TMEM267Q0VDI3 215 aaPredicted RBP11.16□□□□□ -0.62
PAF1-202ENST00000416728 C1orf100Q5SVJ3 147 aa11.16□□□□□ -0.62
PAF1-202ENST00000416728 GLDNQ6ZMI3 551 aaPredicted RBP11.16□□□□□ -0.62
PAF1-202ENST00000416728 LRRTM1Q86UE6 522 aa11.16□□□□□ -0.62
PAF1-202ENST00000416728 CASTOR1Q8WTX7 329 aa11.16□□□□□ -0.62
PAF1-202ENST00000416728 PHYHIPQ92561 330 aa11.16□□□□□ -0.62
PAF1-202ENST00000416728 NICN1Q9BSH3 213 aa11.16□□□□□ -0.62
PAF1-202ENST00000416728 TM2D1Q9BX74 207 aa11.16□□□□□ -0.62
PAF1-202ENST00000416728 PLEKHJ1Q9NW61 149 aa11.16□□□□□ -0.62
PAF1-202ENST00000416728 RNF150Q9ULK6 438 aa11.16□□□□□ -0.62
PAF1-202ENST00000416728 WASHC3Q9Y3C0 194 aa11.16□□□□□ -0.62
PAF1-202ENST00000416728 H0YJW9 148 aa11.16□□□□□ -0.62
PAF1-202ENST00000416728 RBBP9O75884 186 aa11.16□□□□□ -0.62
PAF1-202ENST00000416728 SPNP16150 400 aa11.16□□□□□ -0.62
PAF1-202ENST00000416728 UNC119Q13432 240 aa11.16□□□□□ -0.62
PAF1-202ENST00000416728 PYHIN1Q6K0P9 492 aa11.16□□□□□ -0.62
PAF1-202ENST00000416728 ZNF880Q6PDB4 577 aa11.16□□□□□ -0.62
PAF1-202ENST00000416728 SBSPONQ8IVN8 264 aa11.16□□□□□ -0.62
PAF1-202ENST00000416728 OR6Q1Q8NGQ2 317 aa11.16□□□□□ -0.62
PAF1-202ENST00000416728 FBLIM1Q8WUP2 373 aa11.16□□□□□ -0.62
PAF1-202ENST00000416728 ARPC1AQ92747 370 aa11.16□□□□□ -0.62
PAF1-202ENST00000416728 ABHD14BQ96IU4 210 aa11.16□□□□□ -0.62
PAF1-202ENST00000416728 TMED9Q9BVK6 235 aa11.16□□□□□ -0.62
PAF1-202ENST00000416728 RIMS4Q9H426 269 aaPredicted RBP11.16□□□□□ -0.62
PAF1-202ENST00000416728 KCNK15Q9H427 330 aa11.16□□□□□ -0.62
PAF1-202ENST00000416728 NUBP2Q9Y5Y2 271 aa11.16□□□□□ -0.62
PAF1-202ENST00000416728 IGHV4OR15-8A0A075B7B6 117 aa11.15□□□□□ -0.63
PAF1-202ENST00000416728 A0A087WW49 117 aa11.15□□□□□ -0.63
PAF1-202ENST00000416728 FCN1O00602 326 aa11.15□□□□□ -0.63
PAF1-202ENST00000416728 ITGB1BP1O14713 200 aa11.15□□□□□ -0.63
PAF1-202ENST00000416728 OR8U9P0C7N5 309 aa11.15□□□□□ -0.63
PAF1-202ENST00000416728 EGR2P11161 476 aaPredicted RBP11.15□□□□□ -0.63
PAF1-202ENST00000416728 CD40LGP29965 261 aa11.15□□□□□ -0.63
PAF1-202ENST00000416728 RCN1Q15293 331 aa11.15□□□□□ -0.63
PAF1-202ENST00000416728 HSD17B12Q53GQ0 312 aa11.15□□□□□ -0.63
PAF1-202ENST00000416728 ACTBL2Q562R1 376 aa11.15□□□□□ -0.63
PAF1-202ENST00000416728 CD200R1LQ6Q8B3 271 aa11.15□□□□□ -0.63
PAF1-202ENST00000416728 UNQ5815/PRO19632Q6UWF5 114 aa11.15□□□□□ -0.63
PAF1-202ENST00000416728 PPP1R27Q86WC6 154 aa11.15□□□□□ -0.63
PAF1-202ENST00000416728 OR5AN1Q8NGI8 311 aa11.15□□□□□ -0.63
PAF1-202ENST00000416728 EDARADDQ8WWZ3 215 aa11.15□□□□□ -0.63
PAF1-202ENST00000416728 RCHY1Q96PM5 261 aa11.15□□□□□ -0.63
PAF1-202ENST00000416728 MND1Q9BWT6 205 aa11.15□□□□□ -0.63
PAF1-202ENST00000416728 PARP12Q9H0J9 701 aaKnown RBP11.15□□□□□ -0.63
PAF1-202ENST00000416728 TPSG1Q9NRR2 321 aa11.15□□□□□ -0.63
PAF1-202ENST00000416728 FKBP14Q9NWM8 211 aa11.15□□□□□ -0.63
PAF1-202ENST00000416728 TRBV6-6A0A0A6YYG2 114 aa11.14□□□□□ -0.63
PAF1-202ENST00000416728 TMEM14DPA8MWL7 114 aa11.14□□□□□ -0.63
PAF1-202ENST00000416728 SLC22A1O15245 554 aa11.14□□□□□ -0.63
PAF1-202ENST00000416728 HSPA12AO43301 675 aa11.14□□□□□ -0.63
PAF1-202ENST00000416728 BPNT1O95861 308 aa11.14□□□□□ -0.63
PAF1-202ENST00000416728 IGHV3-11P01762 117 aa11.14□□□□□ -0.63
PAF1-202ENST00000416728 GP9P14770 177 aa11.14□□□□□ -0.63
PAF1-202ENST00000416728 SRMP19623 302 aa11.14□□□□□ -0.63
PAF1-202ENST00000416728 ZBTB25P24278 435 aa11.14□□□□□ -0.63
PAF1-202ENST00000416728 TPPP2P59282 170 aa11.14□□□□□ -0.63
PAF1-202ENST00000416728 PITPNAQ00169 270 aa11.14□□□□□ -0.63
PAF1-202ENST00000416728 AKIRIN2Q53H80 203 aa11.14□□□□□ -0.63
PAF1-202ENST00000416728 ACSM6Q6P461 480 aa11.14□□□□□ -0.63
PAF1-202ENST00000416728 OVCH2Q7RTZ1 564 aa11.14□□□□□ -0.63
PAF1-202ENST00000416728 CEACAM19Q7Z692 300 aa11.14□□□□□ -0.63
PAF1-202ENST00000416728 OR6M1Q8NGM8 313 aa11.14□□□□□ -0.63
PAF1-202ENST00000416728 MUC7Q8TAX7 377 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms