RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 GNG4P50150 75 aa10.24□□□□□ -0.77
PTPRF-205ENST00000414879 PAX5Q02548 391 aa10.24□□□□□ -0.77
PTPRF-205ENST00000414879 VAX2Q9UIW0 290 aa10.24□□□□□ -0.77
PTPRF-205ENST00000414879 TRAV30A0A087WSZ9 112 aa10.24□□□□□ -0.77
PTPRF-205ENST00000414879 DBX1A6NMT0 343 aa10.24□□□□□ -0.77
PTPRF-205ENST00000414879 CXorf1O96002 111 aa10.24□□□□□ -0.77
PTPRF-205ENST00000414879 SMIM17P0DL12 118 aa10.24□□□□□ -0.77
PTPRF-205ENST00000414879 ERVFC1-1P60608 527 aa10.24□□□□□ -0.77
PTPRF-205ENST00000414879 ZNF439Q8NDP4 499 aa10.24□□□□□ -0.77
PTPRF-205ENST00000414879 BVESQ8NE79 360 aa10.24□□□□□ -0.77
PTPRF-205ENST00000414879 PPIAL4CA0A0B4J2A2 164 aa10.24□□□□□ -0.77
PTPRF-205ENST00000414879 RBFOX3A6NFN3 312 aa10.24□□□□□ -0.77
PTPRF-205ENST00000414879 ARG1P05089 322 aa10.24□□□□□ -0.77
PTPRF-205ENST00000414879 PPIAL4GP0DN37 164 aa10.24□□□□□ -0.77
PTPRF-205ENST00000414879 G6PCP35575 357 aa10.24□□□□□ -0.77
PTPRF-205ENST00000414879 UBE2L3P68036 154 aaKnown RBP10.24□□□□□ -0.77
PTPRF-205ENST00000414879 WDR73Q6P4I2 378 aa10.24□□□□□ -0.77
PTPRF-205ENST00000414879 SPACA3Q8IXA5 215 aa10.24□□□□□ -0.77
PTPRF-205ENST00000414879 C9orf62Q8N4C0 152 aa10.24□□□□□ -0.77
PTPRF-205ENST00000414879 OR11H7Q8NGC8 314 aa10.24□□□□□ -0.77
PTPRF-205ENST00000414879 HDHD3Q9BSH5 251 aaPredicted RBP10.24□□□□□ -0.77
PTPRF-205ENST00000414879 TMUB1Q9BVT8 246 aa10.24□□□□□ -0.77
PTPRF-205ENST00000414879 CLEC7AQ9BXN2 247 aa10.24□□□□□ -0.77
PTPRF-205ENST00000414879 PLSCR3Q9NRY6 295 aa10.24□□□□□ -0.77
PTPRF-205ENST00000414879 RAMP1O60894 148 aa10.23□□□□□ -0.77
PTPRF-205ENST00000414879 IGFBP3P17936 291 aaPredicted RBP10.23□□□□□ -0.77
PTPRF-205ENST00000414879 IGHV1-2P23083 117 aa10.23□□□□□ -0.77
PTPRF-205ENST00000414879 RND3P61587 244 aa10.23□□□□□ -0.77
PTPRF-205ENST00000414879 RPL8P62917 257 aaKnown RBP10.23□□□□□ -0.77
PTPRF-205ENST00000414879 VWA1Q6PCB0 445 aa10.23□□□□□ -0.77
PTPRF-205ENST00000414879 C19orf24Q9BVV8 132 aa10.23□□□□□ -0.77
PTPRF-205ENST00000414879 PGLYRP1O75594 196 aaPredicted RBP10.23□□□□□ -0.77
PTPRF-205ENST00000414879 WDR31Q8NA23 367 aa10.23□□□□□ -0.77
PTPRF-205ENST00000414879 ANAPC16Q96DE5 110 aa10.23□□□□□ -0.77
PTPRF-205ENST00000414879 RHOVQ96L33 236 aa10.23□□□□□ -0.77
PTPRF-205ENST00000414879 LOC105371242A0A075B767 164 aa10.23□□□□□ -0.77
PTPRF-205ENST00000414879 S100A4P26447 101 aaKnown RBP10.23□□□□□ -0.77
PTPRF-205ENST00000414879 ZNF385CQ66K41 422 aaPredicted RBP10.23□□□□□ -0.77
PTPRF-205ENST00000414879 ACP7Q6ZNF0 438 aa10.23□□□□□ -0.77
PTPRF-205ENST00000414879 SLC35E3Q7Z769 313 aa10.23□□□□□ -0.77
PTPRF-205ENST00000414879 OR4C13Q8NGP0 309 aa10.23□□□□□ -0.77
PTPRF-205ENST00000414879 TOLLIPQ9H0E2 274 aa10.23□□□□□ -0.77
PTPRF-205ENST00000414879 NAT8Q9UHE5 227 aa10.23□□□□□ -0.77
PTPRF-205ENST00000414879 SCTP09683 121 aa10.23□□□□□ -0.77
PTPRF-205ENST00000414879 RAB9AP51151 201 aa10.23□□□□□ -0.77
PTPRF-205ENST00000414879 PAFAH1B2P68402 229 aa10.23□□□□□ -0.77
PTPRF-205ENST00000414879 H1FOOQ8IZA3 346 aaPredicted RBP10.23□□□□□ -0.77
PTPRF-205ENST00000414879 CHAC2Q8WUX2 184 aa10.23□□□□□ -0.77
PTPRF-205ENST00000414879 TMEM106BQ9NUM4 274 aa10.23□□□□□ -0.77
PTPRF-205ENST00000414879 A0A0G2JMM0 328 aa10.22□□□□□ -0.77
PTPRF-205ENST00000414879 A0A1W2PPB8 328 aa10.22□□□□□ -0.77
PTPRF-205ENST00000414879 A0A1W2PRS3 328 aa10.22□□□□□ -0.77
PTPRF-205ENST00000414879 ZNF705GA8MUZ8 300 aaPredicted RBP10.22□□□□□ -0.77
PTPRF-205ENST00000414879 KIR3DP1A8MWS1 328 aa10.22□□□□□ -0.77
PTPRF-205ENST00000414879 DEDDO75618 318 aa10.22□□□□□ -0.77
PTPRF-205ENST00000414879 CXCL3P19876 107 aa10.22□□□□□ -0.77
PTPRF-205ENST00000414879 HSPE1P61604 102 aaKnown RBP10.22□□□□□ -0.77
PTPRF-205ENST00000414879 LYZP61626 148 aa10.22□□□□□ -0.77
PTPRF-205ENST00000414879 IGSF11Q5DX21 431 aa10.22□□□□□ -0.77
PTPRF-205ENST00000414879 C10orf113Q5VZT2 155 aa10.22□□□□□ -0.77
PTPRF-205ENST00000414879 A0A1B0GTI1 187 aa10.22□□□□□ -0.77
PTPRF-205ENST00000414879 SCGB1D1O95968 90 aa10.22□□□□□ -0.77
PTPRF-205ENST00000414879 NDUFA6P56556 154 aa10.22□□□□□ -0.77
PTPRF-205ENST00000414879 B2MP61769 119 aa10.22□□□□□ -0.77
PTPRF-205ENST00000414879 MOGAT2Q3SYC2 334 aa10.22□□□□□ -0.77
PTPRF-205ENST00000414879 C9orf106Q8NAJ2 232 aa10.22□□□□□ -0.77
PTPRF-205ENST00000414879 DNASE2O00115 360 aaPredicted RBP10.22□□□□□ -0.77
PTPRF-205ENST00000414879 ANKRD55Q3KP44 614 aa10.22□□□□□ -0.77
PTPRF-205ENST00000414879 MYPOPQ86VE0 399 aaPredicted RBP10.22□□□□□ -0.77
PTPRF-205ENST00000414879 PCGF1Q9BSM1 259 aa10.22□□□□□ -0.77
PTPRF-205ENST00000414879 C20orf24Q9BUV8 137 aa10.22□□□□□ -0.77
PTPRF-205ENST00000414879 A0A1W2PP11 408 aa10.22□□□□□ -0.77
PTPRF-205ENST00000414879 ZNF826PQ6ZT77 177 aa10.22□□□□□ -0.77
PTPRF-205ENST00000414879 ASCL3Q9NQ33 180 aa10.22□□□□□ -0.77
PTPRF-205ENST00000414879 PLSCR4Q9NRQ2 329 aa10.22□□□□□ -0.77
PTPRF-205ENST00000414879 ZNF586Q9NXT0 402 aa10.22□□□□□ -0.77
PTPRF-205ENST00000414879 TUBD1Q9UJT1 453 aa10.22□□□□□ -0.77
PTPRF-205ENST00000414879 BRWD1Q9NSI6 2320 aa10.21□□□□□ -0.77
PTPRF-205ENST00000414879 OPN1MWP04001 364 aa10.21□□□□□ -0.77
PTPRF-205ENST00000414879 OPN1MW2P0DN77 364 aa10.21□□□□□ -0.77
PTPRF-205ENST00000414879 OPN1MW3P0DN78 364 aa10.21□□□□□ -0.77
PTPRF-205ENST00000414879 HIST1H1EP10412 219 aaKnown RBP10.21□□□□□ -0.77
PTPRF-205ENST00000414879 CD1BP29016 333 aa10.21□□□□□ -0.77
PTPRF-205ENST00000414879 DEPPQ9NTK1 212 aa10.21□□□□□ -0.77
PTPRF-205ENST00000414879 YTHDF2Q9Y5A9 579 aaKnown RBP10.21□□□□□ -0.77
PTPRF-205ENST00000414879 URGCP-MRPS24S4R325 110 aa10.21□□□□□ -0.77
PTPRF-205ENST00000414879 ATXN7O15265 892 aaPredicted RBP10.21□□□□□ -0.77
PTPRF-205ENST00000414879 GATCO43716 136 aaKnown RBP10.21□□□□□ -0.77
PTPRF-205ENST00000414879 ATP5J2P56134 94 aa10.21□□□□□ -0.77
PTPRF-205ENST00000414879 ZNF362Q5T0B9 420 aaPredicted RBP10.21□□□□□ -0.77
PTPRF-205ENST00000414879 STPG3Q8N7X2 389 aa10.21□□□□□ -0.77
PTPRF-205ENST00000414879 TMEM18Q96B42 140 aa10.21□□□□□ -0.77
PTPRF-205ENST00000414879 A0A1W2PS18 150 aa10.21□□□□□ -0.78
PTPRF-205ENST00000414879 PQLC2LA1A4F0 135 aa10.21□□□□□ -0.78
PTPRF-205ENST00000414879 J3QRE1 110 aa10.21□□□□□ -0.78
PTPRF-205ENST00000414879 LMX1BO60663 402 aa10.21□□□□□ -0.78
PTPRF-205ENST00000414879 ZNF205O95201 554 aa10.21□□□□□ -0.78
PTPRF-205ENST00000414879 VSIG10L2P0DP72 767 aa10.21□□□□□ -0.78
PTPRF-205ENST00000414879 ID1P41134 155 aa10.21□□□□□ -0.78
PTPRF-205ENST00000414879 EFNB1P98172 346 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms