RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 RND2P52198 227 aa16.06■□□□□ 0.16
SHANK3-202ENST00000414786 COTL1Q14019 142 aa16.06■□□□□ 0.16
SHANK3-202ENST00000414786 M0R381 172 aa16.06■□□□□ 0.16
SHANK3-202ENST00000414786 IL13RA2Q14627 380 aa16.06■□□□□ 0.16
SHANK3-202ENST00000414786 WFIKKN1Q96NZ8 548 aa16.06■□□□□ 0.16
SHANK3-202ENST00000414786 TMEM50BP56557 158 aa16.06■□□□□ 0.16
SHANK3-202ENST00000414786 NRN1LQ496H8 165 aa16.06■□□□□ 0.16
SHANK3-202ENST00000414786 C18orf15Q96N68 181 aa16.06■□□□□ 0.16
SHANK3-202ENST00000414786 CEACAM4O75871 244 aa16.06■□□□□ 0.16
SHANK3-202ENST00000414786 SNRPD3P62318 126 aaKnown RBP16.06■□□□□ 0.16
SHANK3-202ENST00000414786 LINC00615Q96LM1 132 aaPredicted RBP16.06■□□□□ 0.16
SHANK3-202ENST00000414786 BCL2L10Q9HD36 194 aa16.06■□□□□ 0.16
SHANK3-202ENST00000414786 TUBD1Q9UJT1 453 aa16.06■□□□□ 0.16
SHANK3-202ENST00000414786 FBXW9Q5XUX1 488 aa16.05■□□□□ 0.16
SHANK3-202ENST00000414786 TMEM160Q9NX00 188 aa16.05■□□□□ 0.16
SHANK3-202ENST00000414786 CD69Q07108 199 aa16.05■□□□□ 0.16
SHANK3-202ENST00000414786 FAM159AQ6UWV7 190 aa16.05■□□□□ 0.16
SHANK3-202ENST00000414786 PPYP01298 95 aa16.05■□□□□ 0.16
SHANK3-202ENST00000414786 RNASE4P34096 147 aaKnown RBP16.05■□□□□ 0.16
SHANK3-202ENST00000414786 WNT10AQ9GZT5 417 aa16.05■□□□□ 0.16
SHANK3-202ENST00000414786 PLSCR2Q9NRY7 297 aa16.05■□□□□ 0.16
SHANK3-202ENST00000414786 LINC00869P0C866 280 aa16.05■□□□□ 0.16
SHANK3-202ENST00000414786 AWAT1Q58HT5 328 aa16.05■□□□□ 0.16
SHANK3-202ENST00000414786 ST6GALNAC3Q8NDV1 305 aa16.05■□□□□ 0.16
SHANK3-202ENST00000414786 CRYGNQ8WXF5 182 aa16.05■□□□□ 0.16
SHANK3-202ENST00000414786 CD99P14209 185 aa16.05■□□□□ 0.16
SHANK3-202ENST00000414786 A0A087X0M5 115 aa16.05■□□□□ 0.16
SHANK3-202ENST00000414786 A0A1B0GX30 115 aa16.05■□□□□ 0.16
SHANK3-202ENST00000414786 TCRBV16S1A1N1A0A5B0 115 aa16.05■□□□□ 0.16
SHANK3-202ENST00000414786 CDS2O95674 445 aa16.05■□□□□ 0.16
SHANK3-202ENST00000414786 CTGFP29279 349 aa16.05■□□□□ 0.16
SHANK3-202ENST00000414786 ZNF770Q6IQ21 691 aaPredicted RBP16.05■□□□□ 0.16
SHANK3-202ENST00000414786 GMPPAQ96IJ6 420 aaPredicted RBP16.05■□□□□ 0.16
SHANK3-202ENST00000414786 RBM11P57052 281 aaKnown RBP16.04■□□□□ 0.16
SHANK3-202ENST00000414786 OR8D4Q8NGM9 314 aa16.04■□□□□ 0.16
SHANK3-202ENST00000414786 TRAV21A0A0B4J279 112 aa16.04■□□□□ 0.16
SHANK3-202ENST00000414786 SRSF12Q8WXF0 261 aaKnown RBP16.04■□□□□ 0.16
SHANK3-202ENST00000414786 RELQ04864 619 aaPredicted RBP16.04■□□□□ 0.16
SHANK3-202ENST00000414786 MESTQ5EB52 335 aa16.04■□□□□ 0.16
SHANK3-202ENST00000414786 GDF9O60383 454 aa16.04■□□□□ 0.16
SHANK3-202ENST00000414786 A0A0U1RRA0 63 aa16.04■□□□□ 0.16
SHANK3-202ENST00000414786 UPK3AO75631 287 aa16.04■□□□□ 0.16
SHANK3-202ENST00000414786 EFNB1P98172 346 aa16.04■□□□□ 0.16
SHANK3-202ENST00000414786 PGLYRP3Q96LB9 341 aa16.04■□□□□ 0.16
SHANK3-202ENST00000414786 UCNP55089 124 aa16.03■□□□□ 0.16
SHANK3-202ENST00000414786 UCP2P55851 309 aa16.03■□□□□ 0.16
SHANK3-202ENST00000414786 ZNF383Q8NA42 475 aa16.03■□□□□ 0.16
SHANK3-202ENST00000414786 CYB5R1Q9UHQ9 305 aa16.03■□□□□ 0.16
SHANK3-202ENST00000414786 IGF2P01344 180 aa16.03■□□□□ 0.16
SHANK3-202ENST00000414786 RCC1P18754 421 aaPredicted RBP16.03■□□□□ 0.16
SHANK3-202ENST00000414786 FGF20Q9NP95 211 aaPredicted RBP16.03■□□□□ 0.16
SHANK3-202ENST00000414786 NUP98P52948 1817 aa16.03■□□□□ 0.16
SHANK3-202ENST00000414786 C21orf140B9A014 251 aa16.03■□□□□ 0.16
SHANK3-202ENST00000414786 HBZP02008 142 aa16.03■□□□□ 0.16
SHANK3-202ENST00000414786 PXMP4Q9Y6I8 212 aa16.03■□□□□ 0.16
SHANK3-202ENST00000414786 UBR2Q8IWV8 1755 aa16.03■□□□□ 0.16
SHANK3-202ENST00000414786 TRBV7-9A0A0J9YWB2 115 aa16.03■□□□□ 0.16
SHANK3-202ENST00000414786 IGLV3-27P01718 113 aa16.03■□□□□ 0.16
SHANK3-202ENST00000414786 CFAP161Q6P656 301 aa16.03■□□□□ 0.16
SHANK3-202ENST00000414786 OR5AN1Q8NGI8 311 aa16.03■□□□□ 0.16
SHANK3-202ENST00000414786 TRPM6Q9BX84 2022 aa16.03■□□□□ 0.16
SHANK3-202ENST00000414786 TCRBV5S2A0A599 114 aa16.02■□□□□ 0.16
SHANK3-202ENST00000414786 LIPT2A6NK58 231 aa16.02■□□□□ 0.16
SHANK3-202ENST00000414786 NKX2-2O95096 273 aa16.02■□□□□ 0.16
SHANK3-202ENST00000414786 CA10Q9NS85 328 aa16.02■□□□□ 0.16
SHANK3-202ENST00000414786 TNFRSF18Q9Y5U5 241 aa16.02■□□□□ 0.16
SHANK3-202ENST00000414786 CD1AP06126 327 aa16.02■□□□□ 0.16
SHANK3-202ENST00000414786 LHX2P50458 406 aa16.02■□□□□ 0.16
SHANK3-202ENST00000414786 IGSF11Q5DX21 431 aa16.02■□□□□ 0.16
SHANK3-202ENST00000414786 GFI1BQ5VTD9 330 aa16.02■□□□□ 0.16
SHANK3-202ENST00000414786 APC2O95996 2303 aa16.02■□□□□ 0.16
SHANK3-202ENST00000414786 PSCAO43653 123 aa16.02■□□□□ 0.16
SHANK3-202ENST00000414786 HKR1P10072 659 aa16.02■□□□□ 0.16
SHANK3-202ENST00000414786 IL24Q13007 206 aa16.02■□□□□ 0.16
SHANK3-202ENST00000414786 SFTA2Q6UW10 78 aa16.02■□□□□ 0.16
SHANK3-202ENST00000414786 OPN4Q9UHM6 478 aa16.02■□□□□ 0.16
SHANK3-202ENST00000414786 OR2W1Q9Y3N9 320 aa16.02■□□□□ 0.16
SHANK3-202ENST00000414786 NDUFB6O95139 128 aa16.02■□□□□ 0.15
SHANK3-202ENST00000414786 RUNX1Q01196 453 aa16.02■□□□□ 0.15
SHANK3-202ENST00000414786 ABHD12Q8N2K0 398 aa16.02■□□□□ 0.15
SHANK3-202ENST00000414786 SNAI2O43623 268 aa16.02■□□□□ 0.15
SHANK3-202ENST00000414786 F12P00748 615 aaPredicted RBP16.02■□□□□ 0.15
SHANK3-202ENST00000414786 EWSR1Q01844 656 aaKnown RBP eCLIP16.02■□□□□ 0.15
SHANK3-202ENST00000414786 ANAPC16Q96DE5 110 aa16.02■□□□□ 0.15
SHANK3-202ENST00000414786 IFT22Q9H7X7 185 aa16.02■□□□□ 0.15
SHANK3-202ENST00000414786 GAGE10A6NGK3 116 aa16.02■□□□□ 0.15
SHANK3-202ENST00000414786 PLP1P60201 277 aa16.02■□□□□ 0.15
SHANK3-202ENST00000414786 LEUTXA8MZ59 168 aa16.01■□□□□ 0.15
SHANK3-202ENST00000414786 CDC42EP2O14613 210 aa16.01■□□□□ 0.15
SHANK3-202ENST00000414786 FAM3BP58499 235 aaPredicted RBP16.01■□□□□ 0.15
SHANK3-202ENST00000414786 SPRED2Q7Z698 418 aa16.01■□□□□ 0.15
SHANK3-202ENST00000414786 MOSP00540 346 aa16.01■□□□□ 0.15
SHANK3-202ENST00000414786 SLC25A1P53007 311 aa16.01■□□□□ 0.15
SHANK3-202ENST00000414786 NXT2Q9NPJ8 142 aaKnown RBP16.01■□□□□ 0.15
SHANK3-202ENST00000414786 KIAA1644Q3SXP7 199 aa16.01■□□□□ 0.15
SHANK3-202ENST00000414786 PRSS54Q6PEW0 395 aa16.01■□□□□ 0.15
SHANK3-202ENST00000414786 INO80CQ6PI98 192 aaPredicted RBP16.01■□□□□ 0.15
SHANK3-202ENST00000414786 PQLC2Q6ZP29 291 aa16.01■□□□□ 0.15
SHANK3-202ENST00000414786 SIGLEC5O15389 551 aa16.01■□□□□ 0.15
SHANK3-202ENST00000414786 LSM10Q969L4 123 aaKnown RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms