RNA–Protein interactions for RNA: ENST00000409954.6

MCF2L-210, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-210ENST00000409954 CHMP1AQ9HD42 196 aaPredicted RBP11.32□□□□□ -0.6
MCF2L-210ENST00000409954 SLC23A1Q9UHI7 598 aa11.32□□□□□ -0.6
MCF2L-210ENST00000409954 SCOCQ9UIL1 159 aa11.32□□□□□ -0.6
MCF2L-210ENST00000409954 LSM4Q9Y4Z0 139 aaKnown RBP11.32□□□□□ -0.6
MCF2L-210ENST00000409954 SAA2-SAA4A0A096LPE2 208 aa11.31□□□□□ -0.6
MCF2L-210ENST00000409954 OR5H14A6NHG9 310 aa11.31□□□□□ -0.6
MCF2L-210ENST00000409954 I3L521 148 aa11.31□□□□□ -0.6
MCF2L-210ENST00000409954 RBBP9O75884 186 aa11.31□□□□□ -0.6
MCF2L-210ENST00000409954 SAA2P0DJI9 122 aaPredicted RBP11.31□□□□□ -0.6
MCF2L-210ENST00000409954 ARSBP15848 533 aa11.31□□□□□ -0.6
MCF2L-210ENST00000409954 ZBTB25P24278 435 aa11.31□□□□□ -0.6
MCF2L-210ENST00000409954 OR3A3P47888 321 aa11.31□□□□□ -0.6
MCF2L-210ENST00000409954 PSMD7P51665 324 aa11.31□□□□□ -0.6
MCF2L-210ENST00000409954 QRFPP83859 136 aa11.31□□□□□ -0.6
MCF2L-210ENST00000409954 ZNF616Q08AN1 781 aa11.31□□□□□ -0.6
MCF2L-210ENST00000409954 FAM27D1Q5T7N8 215 aa11.31□□□□□ -0.6
MCF2L-210ENST00000409954 C11orf87Q6NUJ2 197 aa11.31□□□□□ -0.6
MCF2L-210ENST00000409954 SVOPQ8N4V2 548 aa11.31□□□□□ -0.6
MCF2L-210ENST00000409954 TCTEX1D1Q8N7M0 179 aa11.31□□□□□ -0.6
MCF2L-210ENST00000409954 EDARADDQ8WWZ3 215 aa11.31□□□□□ -0.6
MCF2L-210ENST00000409954 KLK15Q9H2R5 256 aa11.31□□□□□ -0.6
MCF2L-210ENST00000409954 ISYNA1Q9NPH2 558 aa11.31□□□□□ -0.6
MCF2L-210ENST00000409954 PARP11Q9NR21 331 aa11.31□□□□□ -0.6
MCF2L-210ENST00000409954 RNF150Q9ULK6 438 aa11.31□□□□□ -0.6
MCF2L-210ENST00000409954 HSF4Q9ULV5 492 aa11.31□□□□□ -0.6
MCF2L-210ENST00000409954 LSM2Q9Y333 95 aaKnown RBP11.31□□□□□ -0.6
MCF2L-210ENST00000409954 ERICH4A6NGS2 130 aa11.3□□□□□ -0.6
MCF2L-210ENST00000409954 G3V318 75 aa11.3□□□□□ -0.6
MCF2L-210ENST00000409954 RRHO14718 337 aa11.3□□□□□ -0.6
MCF2L-210ENST00000409954 ATP6V0E1O15342 81 aa11.3□□□□□ -0.6
MCF2L-210ENST00000409954 ARL6IP5O75915 188 aa11.3□□□□□ -0.6
MCF2L-210ENST00000409954 GSTP1P09211 210 aaKnown RBP11.3□□□□□ -0.6
MCF2L-210ENST00000409954 CT45A6P0DMU7 189 aa11.3□□□□□ -0.6
MCF2L-210ENST00000409954 CT45A5P0DMU8 189 aa11.3□□□□□ -0.6
MCF2L-210ENST00000409954 CT45A7P0DMV0 189 aa11.3□□□□□ -0.6
MCF2L-210ENST00000409954 PSMA1P25786 263 aaKnown RBP11.3□□□□□ -0.6
MCF2L-210ENST00000409954 CNTFRP26992 372 aa11.3□□□□□ -0.6
MCF2L-210ENST00000409954 CEACAM6P40199 344 aa11.3□□□□□ -0.6
MCF2L-210ENST00000409954 ECI1P42126 302 aa11.3□□□□□ -0.6
MCF2L-210ENST00000409954 CRIP2P52943 208 aaPredicted RBP11.3□□□□□ -0.6
MCF2L-210ENST00000409954 UNC119Q13432 240 aa11.3□□□□□ -0.6
MCF2L-210ENST00000409954 TPBGQ13641 420 aa11.3□□□□□ -0.6
MCF2L-210ENST00000409954 ZNF260Q3ZCT1 412 aa11.3□□□□□ -0.6
MCF2L-210ENST00000409954 OR5AN1Q8NGI8 311 aa11.3□□□□□ -0.6
MCF2L-210ENST00000409954 SETD6Q8TBK2 473 aa11.3□□□□□ -0.6
MCF2L-210ENST00000409954 UFD1Q92890 307 aa11.3□□□□□ -0.6
MCF2L-210ENST00000409954 RBMXL1Q96E39 390 aaKnown RBP11.3□□□□□ -0.6
MCF2L-210ENST00000409954 AGMATQ9BSE5 352 aa11.3□□□□□ -0.6
MCF2L-210ENST00000409954 LPAR5Q9H1C0 372 aa11.3□□□□□ -0.6
MCF2L-210ENST00000409954 IFI27L2Q9H2X8 130 aa11.3□□□□□ -0.6
MCF2L-210ENST00000409954 NUBP2Q9Y5Y2 271 aa11.3□□□□□ -0.6
MCF2L-210ENST00000409954 SLC17A2O00624 439 aa11.29□□□□□ -0.6
MCF2L-210ENST00000409954 ST8SIA5O15466 376 aa11.29□□□□□ -0.6
MCF2L-210ENST00000409954 CD40LGP29965 261 aa11.29□□□□□ -0.6
MCF2L-210ENST00000409954 LUMP51884 338 aaPredicted RBP11.29□□□□□ -0.6
MCF2L-210ENST00000409954 CX3CL1P78423 397 aa11.29□□□□□ -0.6
MCF2L-210ENST00000409954 IRF3Q14653 427 aa11.29□□□□□ -0.6
MCF2L-210ENST00000409954 AKIRIN2Q53H80 203 aa11.29□□□□□ -0.6
MCF2L-210ENST00000409954 LIPKQ5VXJ0 399 aa11.29□□□□□ -0.6
MCF2L-210ENST00000409954 ZNF429Q86V71 674 aa11.29□□□□□ -0.6
MCF2L-210ENST00000409954 PTX4Q96A99 478 aa11.29□□□□□ -0.6
MCF2L-210ENST00000409954 NICN1Q9BSH3 213 aa11.29□□□□□ -0.6
MCF2L-210ENST00000409954 DUSP21Q9H596 190 aa11.29□□□□□ -0.6
MCF2L-210ENST00000409954 PLGRKTQ9HBL7 147 aa11.29□□□□□ -0.6
MCF2L-210ENST00000409954 WASHC3Q9Y3C0 194 aa11.29□□□□□ -0.6
MCF2L-210ENST00000409954 H7C2Y5 167 aa11.28□□□□□ -0.6
MCF2L-210ENST00000409954 ARPC1BO15143 372 aaKnown RBP11.28□□□□□ -0.6
MCF2L-210ENST00000409954 SOCS1O15524 211 aa11.28□□□□□ -0.6
MCF2L-210ENST00000409954 HSPA12AO43301 675 aa11.28□□□□□ -0.6
MCF2L-210ENST00000409954 PLGLAQ15195 96 aa11.28□□□□□ -0.6
MCF2L-210ENST00000409954 PYHIN1Q6K0P9 492 aa11.28□□□□□ -0.6
MCF2L-210ENST00000409954 CD200R1LQ6Q8B3 271 aa11.28□□□□□ -0.6
MCF2L-210ENST00000409954 ZNF562Q6V9R5 426 aa11.28□□□□□ -0.6
MCF2L-210ENST00000409954 TMEM203Q969S6 136 aa11.28□□□□□ -0.6
MCF2L-210ENST00000409954 CYYR1Q96J86 154 aa11.28□□□□□ -0.6
MCF2L-210ENST00000409954 C11orf54Q9H0W9 315 aaPredicted RBP11.28□□□□□ -0.6
MCF2L-210ENST00000409954 FBXL15Q9H469 300 aa11.28□□□□□ -0.6
MCF2L-210ENST00000409954 GNB4Q9HAV0 340 aa11.28□□□□□ -0.6
MCF2L-210ENST00000409954 AK3Q9UIJ7 227 aa11.28□□□□□ -0.6
MCF2L-210ENST00000409954 ZNF221Q9UK13 617 aa11.28□□□□□ -0.6
MCF2L-210ENST00000409954 FOXA2Q9Y261 457 aaPredicted RBP11.28□□□□□ -0.6
MCF2L-210ENST00000409954 ZNF256Q9Y2P7 627 aaPredicted RBP11.28□□□□□ -0.6
MCF2L-210ENST00000409954 H0YJW9 148 aa11.27□□□□□ -0.61
MCF2L-210ENST00000409954 HSMCR30P0CW71 290 aa11.27□□□□□ -0.61
MCF2L-210ENST00000409954 TMEM50BP56557 158 aa11.27□□□□□ -0.61
MCF2L-210ENST00000409954 RPL39P5Q59GN2 51 aa11.27□□□□□ -0.61
MCF2L-210ENST00000409954 FAM131AQ6UXB0 335 aa11.27□□□□□ -0.61
MCF2L-210ENST00000409954 TMEM91Q6ZNR0 172 aa11.27□□□□□ -0.61
MCF2L-210ENST00000409954 OR56B1Q8NGI3 324 aa11.27□□□□□ -0.61
MCF2L-210ENST00000409954 ABHD14BQ96IU4 210 aa11.27□□□□□ -0.61
MCF2L-210ENST00000409954 TSNAXQ99598 290 aaKnown RBP11.27□□□□□ -0.61
MCF2L-210ENST00000409954 Q9N2K0 584 aa11.27□□□□□ -0.61
MCF2L-210ENST00000409954 ACOT13Q9NPJ3 140 aa11.27□□□□□ -0.61
MCF2L-210ENST00000409954 AK6Q9Y3D8 172 aaKnown RBP11.27□□□□□ -0.61
MCF2L-210ENST00000409954 A0A0A6YYD4 124 aa11.26□□□□□ -0.61
MCF2L-210ENST00000409954 A0A1W2PN81 502 aa11.26□□□□□ -0.61
MCF2L-210ENST00000409954 LINC01619G3V211 115 aa11.26□□□□□ -0.61
MCF2L-210ENST00000409954 FCN1O00602 326 aa11.26□□□□□ -0.61
MCF2L-210ENST00000409954 OVOL1O14753 267 aa11.26□□□□□ -0.61
MCF2L-210ENST00000409954 RGS10O43665 173 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms