RNA–Protein interactions for RNA: ENST00000409782.5

LSM5-203, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 649 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-203ENST00000409782 ONECUT1Q9UBC0 465 aa4.84□□□□□ -1.63
LSM5-203ENST00000409782 MRM2Q9UI43 246 aaKnown RBP4.84□□□□□ -1.63
LSM5-203ENST00000409782 IGHV3OR15-7A0A075B7D8 119 aa4.83□□□□□ -1.64
LSM5-203ENST00000409782 A0A1W2PQL4 384 aaPredicted RBP4.83□□□□□ -1.64
LSM5-203ENST00000409782 MEIOCA2RUB1 952 aa4.83□□□□□ -1.64
LSM5-203ENST00000409782 METTL15A6NJ78 407 aa4.83□□□□□ -1.64
LSM5-203ENST00000409782 MPTX1A8MV57 137 aa4.83□□□□□ -1.64
LSM5-203ENST00000409782 ZNF879B4DU55 563 aa4.83□□□□□ -1.64
LSM5-203ENST00000409782 E9PQ18 207 aa4.83□□□□□ -1.64
LSM5-203ENST00000409782 CLDN34H7C241 214 aa4.83□□□□□ -1.64
LSM5-203ENST00000409782 J3QT63 122 aa4.83□□□□□ -1.64
LSM5-203ENST00000409782 DLGAP1O14490 977 aa4.83□□□□□ -1.64
LSM5-203ENST00000409782 CDIPTO14735 213 aa4.83□□□□□ -1.64
LSM5-203ENST00000409782 GPM6AP51674 278 aa4.83□□□□□ -1.64
LSM5-203ENST00000409782 HCCSP53701 268 aa4.83□□□□□ -1.64
LSM5-203ENST00000409782 LINC01547P58512 204 aaPredicted RBP4.83□□□□□ -1.64
LSM5-203ENST00000409782 SEC61GP60059 68 aa4.83□□□□□ -1.64
LSM5-203ENST00000409782 SNRPGP62308 76 aaKnown RBP4.83□□□□□ -1.64
LSM5-203ENST00000409782 UBA52P62987 128 aaKnown RBP4.83□□□□□ -1.64
LSM5-203ENST00000409782 BDH1Q02338 343 aa4.83□□□□□ -1.64
LSM5-203ENST00000409782 TMEM187Q14656 261 aa4.83□□□□□ -1.64
LSM5-203ENST00000409782 CEACAM21Q3KPI0 293 aa4.83□□□□□ -1.64
LSM5-203ENST00000409782 LRRC10Q5BKY1 277 aa4.83□□□□□ -1.64
LSM5-203ENST00000409782 MUC21Q5SSG8 566 aa4.83□□□□□ -1.64
LSM5-203ENST00000409782 SLC25A30Q5SVS4 291 aa4.83□□□□□ -1.64
LSM5-203ENST00000409782 CLVS2Q5SYC1 327 aa4.83□□□□□ -1.64
LSM5-203ENST00000409782 ZNF684Q5T5D7 378 aa4.83□□□□□ -1.64
LSM5-203ENST00000409782 ADAMTSL4-AS1Q5T5F5 129 aa4.83□□□□□ -1.64
LSM5-203ENST00000409782 GPR157Q5UAW9 335 aa4.83□□□□□ -1.64
LSM5-203ENST00000409782 METTL11BQ5VVY1 283 aa4.83□□□□□ -1.64
LSM5-203ENST00000409782 MEDAGQ5VYS4 303 aa4.83□□□□□ -1.64
LSM5-203ENST00000409782 PLCXD3Q63HM9 321 aa4.83□□□□□ -1.64
LSM5-203ENST00000409782 SSX6Q7RTT6 188 aa4.83□□□□□ -1.64
LSM5-203ENST00000409782 FAM220AQ7Z4H9 259 aa4.83□□□□□ -1.64
LSM5-203ENST00000409782 CBR4Q8N4T8 237 aa4.83□□□□□ -1.64
LSM5-203ENST00000409782 DHRSXQ8N5I4 330 aa4.83□□□□□ -1.64
LSM5-203ENST00000409782 KIR3DL3Q8N743 410 aa4.83□□□□□ -1.64
LSM5-203ENST00000409782 FAM216BQ8N7L0 139 aa4.83□□□□□ -1.64
LSM5-203ENST00000409782 SIGLECL1Q8N7X8 197 aa4.83□□□□□ -1.64
LSM5-203ENST00000409782 ZDHHC22Q8N966 263 aa4.83□□□□□ -1.64
LSM5-203ENST00000409782 STXBP6Q8NFX7 210 aa4.83□□□□□ -1.64
LSM5-203ENST00000409782 OR10H4Q8NGA5 316 aa4.83□□□□□ -1.64
LSM5-203ENST00000409782 OR5A2Q8NGI9 324 aa4.83□□□□□ -1.64
LSM5-203ENST00000409782 OR1B1Q8NGR6 318 aa4.83□□□□□ -1.64
LSM5-203ENST00000409782 C10orf35Q96D05 121 aa4.83□□□□□ -1.64
LSM5-203ENST00000409782 RNF170Q96K19 258 aa4.83□□□□□ -1.64
LSM5-203ENST00000409782 APOL4Q9BPW4 351 aa4.83□□□□□ -1.64
LSM5-203ENST00000409782 C9orf16Q9BUW7 83 aa4.83□□□□□ -1.64
LSM5-203ENST00000409782 FGF23Q9GZV9 251 aaPredicted RBP4.83□□□□□ -1.64
LSM5-203ENST00000409782 OR51I2Q9H344 312 aa4.83□□□□□ -1.64
LSM5-203ENST00000409782 RAB18Q9NP72 206 aa4.83□□□□□ -1.64
LSM5-203ENST00000409782 ESM1Q9NQ30 184 aa4.83□□□□□ -1.64
LSM5-203ENST00000409782 OR52A1Q9UKL2 312 aa4.83□□□□□ -1.64
LSM5-203ENST00000409782 POLDIP2Q9Y2S7 368 aa4.83□□□□□ -1.64
LSM5-203ENST00000409782 KPTNQ9Y664 436 aa4.83□□□□□ -1.64
LSM5-203ENST00000409782 V9GYS6 101 aa4.83□□□□□ -1.64
LSM5-203ENST00000409782 TENM1Q9UKZ4 2725 aa4.83□□□□□ -1.64
LSM5-203ENST00000409782 MGAM2Q2M2H8 2515 aa4.82□□□□□ -1.64
LSM5-203ENST00000409782 A0A1B0GTI1 187 aa4.82□□□□□ -1.64
LSM5-203ENST00000409782 A0A1B0GVI7 797 aa4.82□□□□□ -1.64
LSM5-203ENST00000409782 PQLC2LA1A4F0 135 aa4.82□□□□□ -1.64
LSM5-203ENST00000409782 NDUFB3O43676 98 aa4.82□□□□□ -1.64
LSM5-203ENST00000409782 MPZL2O60487 215 aa4.82□□□□□ -1.64
LSM5-203ENST00000409782 FCN3O75636 299 aa4.82□□□□□ -1.64
LSM5-203ENST00000409782 GATBO75879 557 aaKnown RBP4.82□□□□□ -1.64
LSM5-203ENST00000409782 NRASP01111 189 aa4.82□□□□□ -1.64
LSM5-203ENST00000409782 FCGR3AP08637 254 aa4.82□□□□□ -1.64
LSM5-203ENST00000409782 SNRPCP09234 159 aaKnown RBP4.82□□□□□ -1.64
LSM5-203ENST00000409782 UBCP0CG48 685 aaKnown RBP4.82□□□□□ -1.64
LSM5-203ENST00000409782 HSMCR30P0CW71 290 aa4.82□□□□□ -1.64
LSM5-203ENST00000409782 PRTN3P24158 256 aa4.82□□□□□ -1.64
LSM5-203ENST00000409782 CAPGP40121 348 aa4.82□□□□□ -1.64
LSM5-203ENST00000409782 TGM4P49221 684 aa4.82□□□□□ -1.64
LSM5-203ENST00000409782 EFNB2P52799 333 aa4.82□□□□□ -1.64
LSM5-203ENST00000409782 CAV3P56539 151 aa4.82□□□□□ -1.64
LSM5-203ENST00000409782 ACTA2P62736 377 aa4.82□□□□□ -1.64
LSM5-203ENST00000409782 GNB1P62873 340 aa4.82□□□□□ -1.64
LSM5-203ENST00000409782 ACTG2P63267 376 aa4.82□□□□□ -1.64
LSM5-203ENST00000409782 RCN1Q15293 331 aa4.82□□□□□ -1.64
LSM5-203ENST00000409782 FAM189A2Q15884 450 aa4.82□□□□□ -1.64
LSM5-203ENST00000409782 ZSCAN26Q16670 478 aa4.82□□□□□ -1.64
LSM5-203ENST00000409782 SMIM21Q3B7S5 101 aa4.82□□□□□ -1.64
LSM5-203ENST00000409782 C6orf226Q5I0X4 101 aa4.82□□□□□ -1.64
LSM5-203ENST00000409782 RUSC1-AS1Q66K80 236 aa4.82□□□□□ -1.64
LSM5-203ENST00000409782 HAGHLQ6PII5 290 aaPredicted RBP4.82□□□□□ -1.64
LSM5-203ENST00000409782 C12orf54Q6X4T0 127 aa4.82□□□□□ -1.64
LSM5-203ENST00000409782 PLEKHG7Q6ZR37 379 aa4.82□□□□□ -1.64
LSM5-203ENST00000409782 TGIF2LXQ8IUE1 241 aa4.82□□□□□ -1.64
LSM5-203ENST00000409782 EGFL6Q8IUX8 553 aa4.82□□□□□ -1.64
LSM5-203ENST00000409782 SLC38A6Q8IZM9 456 aa4.82□□□□□ -1.64
LSM5-203ENST00000409782 YIPF7Q8N8F6 280 aa4.82□□□□□ -1.64
LSM5-203ENST00000409782 SAMD12Q8N8I0 201 aa4.82□□□□□ -1.64
LSM5-203ENST00000409782 ZSCAN4Q8NAM6 433 aaPredicted RBP4.82□□□□□ -1.64
LSM5-203ENST00000409782 ANGPTL6Q8NI99 470 aa4.82□□□□□ -1.64
LSM5-203ENST00000409782 C22orf15Q8WYQ4 148 aa4.82□□□□□ -1.64
LSM5-203ENST00000409782 AQP3Q92482 292 aa4.82□□□□□ -1.64
LSM5-203ENST00000409782 SDSLQ96GA7 329 aa4.82□□□□□ -1.64
LSM5-203ENST00000409782 MRPL48Q96GC5 212 aaKnown RBP4.82□□□□□ -1.64
LSM5-203ENST00000409782 RDH12Q96NR8 316 aa4.82□□□□□ -1.64
LSM5-203ENST00000409782 GAFA1Q96PS6 74 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms