RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 NAA40Q86UY6 237 aa0.76□□□□□ -2.29
PMS1-203ENST00000409593 LHFPL1Q86WI0 220 aa0.76□□□□□ -2.29
PMS1-203ENST00000409593 CIDECQ96AQ7 238 aaPredicted RBP0.76□□□□□ -2.29
PMS1-203ENST00000409593 SNX24Q9Y343 169 aa0.76□□□□□ -2.29
PMS1-203ENST00000409593 ROS1P08922 2347 aa0.76□□□□□ -2.29
PMS1-203ENST00000409593 RAB3GAP2Q9H2M9 1393 aa0.76□□□□□ -2.29
PMS1-203ENST00000409593 EFCAB9A8MZ26 197 aa0.75□□□□□ -2.29
PMS1-203ENST00000409593 CRXO43186 299 aaPredicted RBP0.75□□□□□ -2.29
PMS1-203ENST00000409593 STK16O75716 305 aa0.75□□□□□ -2.29
PMS1-203ENST00000409593 ZNF728P0DKX0 622 aa0.75□□□□□ -2.29
PMS1-203ENST00000409593 NPPCP23582 126 aa0.75□□□□□ -2.29
PMS1-203ENST00000409593 XRCC4Q13426 336 aa0.75□□□□□ -2.29
PMS1-203ENST00000409593 TMEM75Q8N9X5 138 aa0.75□□□□□ -2.29
PMS1-203ENST00000409593 ABHD14BQ96IU4 210 aa0.75□□□□□ -2.29
PMS1-203ENST00000409593 C8orf4Q9NR00 106 aa0.75□□□□□ -2.29
PMS1-203ENST00000409593 LINC00527Q9UJ94 153 aa0.75□□□□□ -2.29
PMS1-203ENST00000409593 FAM215AQ9Y5M1 114 aa0.75□□□□□ -2.29
PMS1-203ENST00000409593 CUL9Q8IWT3 2517 aa0.75□□□□□ -2.29
PMS1-203ENST00000409593 DLG5Q8TDM6 1919 aa0.75□□□□□ -2.29
PMS1-203ENST00000409593 BAZ2BQ9UIF8 2168 aaKnown RBP0.75□□□□□ -2.29
PMS1-203ENST00000409593 OR5K4A6NMS3 321 aa0.75□□□□□ -2.29
PMS1-203ENST00000409593 GPR171O14626 319 aa0.75□□□□□ -2.29
PMS1-203ENST00000409593 SNAP29O95721 258 aa0.75□□□□□ -2.29
PMS1-203ENST00000409593 CCL3P10147 92 aa0.75□□□□□ -2.29
PMS1-203ENST00000409593 CDK2P24941 298 aa0.75□□□□□ -2.29
PMS1-203ENST00000409593 OR1E2P47887 323 aa0.75□□□□□ -2.29
PMS1-203ENST00000409593 IDH3GP51553 393 aaPredicted RBP0.75□□□□□ -2.29
PMS1-203ENST00000409593 FGF12P61328 243 aa0.75□□□□□ -2.29
PMS1-203ENST00000409593 ZNF791Q3KP31 576 aaPredicted RBP0.75□□□□□ -2.29
PMS1-203ENST00000409593 OR10J3Q5JRS4 329 aa0.75□□□□□ -2.29
PMS1-203ENST00000409593 SLC35E3Q7Z769 313 aa0.75□□□□□ -2.29
PMS1-203ENST00000409593 CDRT4Q8N9R6 151 aa0.75□□□□□ -2.29
PMS1-203ENST00000409593 HHLA2Q9UM44 414 aa0.75□□□□□ -2.29
PMS1-203ENST00000409593 PCDH15Q96QU1 1955 aa0.74□□□□□ -2.29
PMS1-203ENST00000409593 CLUHO75153 1309 aa0.74□□□□□ -2.29
PMS1-203ENST00000409593 TRBV6-5A0A0K0K1A5 114 aa0.74□□□□□ -2.29
PMS1-203ENST00000409593 OR11H12B2RN74 326 aa0.74□□□□□ -2.29
PMS1-203ENST00000409593 IGHV1-69P01742 117 aa0.74□□□□□ -2.29
PMS1-203ENST00000409593 C1QCP02747 245 aa0.74□□□□□ -2.29
PMS1-203ENST00000409593 PRB4P10163 310 aaPredicted RBP0.74□□□□□ -2.29
PMS1-203ENST00000409593 CRYBB3P26998 211 aa0.74□□□□□ -2.29
PMS1-203ENST00000409593 TMEM258P61165 79 aa0.74□□□□□ -2.29
PMS1-203ENST00000409593 GTF2BQ00403 316 aa0.74□□□□□ -2.29
PMS1-203ENST00000409593 GLO1Q04760 184 aa0.74□□□□□ -2.29
PMS1-203ENST00000409593 MRPL52Q86TS9 123 aaKnown RBP0.74□□□□□ -2.29
PMS1-203ENST00000409593 OR11H2Q8NH07 326 aa0.74□□□□□ -2.29
PMS1-203ENST00000409593 LRRC39Q96DD0 335 aa0.74□□□□□ -2.29
PMS1-203ENST00000409593 SLC35G5Q96KT7 338 aa0.74□□□□□ -2.29
PMS1-203ENST00000409593 Q96M85 177 aa0.74□□□□□ -2.29
PMS1-203ENST00000409593 CHST5Q9GZS9 411 aa0.74□□□□□ -2.29
PMS1-203ENST00000409593 DNMT1P26358 1616 aaKnown RBP0.73□□□□□ -2.29
PMS1-203ENST00000409593 XCL1P47992 114 aa0.73□□□□□ -2.29
PMS1-203ENST00000409593 FLOT2Q14254 428 aa0.73□□□□□ -2.29
PMS1-203ENST00000409593 TMEM155Q4W5P6 130 aa0.73□□□□□ -2.29
PMS1-203ENST00000409593 TMEM31Q5JXX7 168 aa0.73□□□□□ -2.29
PMS1-203ENST00000409593 TTC33Q6PID6 262 aaPredicted RBP0.73□□□□□ -2.29
PMS1-203ENST00000409593 CCDC112Q8NEF3 446 aa0.73□□□□□ -2.29
PMS1-203ENST00000409593 OR2Y1Q8NGV0 311 aa0.73□□□□□ -2.29
PMS1-203ENST00000409593 ACBD6Q9BR61 282 aa0.73□□□□□ -2.29
PMS1-203ENST00000409593 PRRG3Q9BZD7 231 aa0.73□□□□□ -2.29
PMS1-203ENST00000409593 STK38LQ9Y2H1 464 aa0.73□□□□□ -2.29
PMS1-203ENST00000409593 MYOFQ9NZM1 2061 aa0.72□□□□□ -2.29
PMS1-203ENST00000409593 IGKV3-7A0A075B6H7 116 aa0.72□□□□□ -2.29
PMS1-203ENST00000409593 TRGV5A0A0B4J1U4 118 aa0.72□□□□□ -2.29
PMS1-203ENST00000409593 A0A1W2PQD3 144 aa0.72□□□□□ -2.29
PMS1-203ENST00000409593 SLC17A3O00476 420 aa0.72□□□□□ -2.29
PMS1-203ENST00000409593 UBE2L6O14933 153 aa0.72□□□□□ -2.29
PMS1-203ENST00000409593 OPRM1P35372 400 aa0.72□□□□□ -2.29
PMS1-203ENST00000409593 OR10A3P58181 314 aa0.72□□□□□ -2.29
PMS1-203ENST00000409593 FAM3AP98173 230 aa0.72□□□□□ -2.29
PMS1-203ENST00000409593 AMTNQ6UX39 209 aa0.72□□□□□ -2.29
PMS1-203ENST00000409593 DRAM2Q6UX65 266 aa0.72□□□□□ -2.29
PMS1-203ENST00000409593 UNQ6190/PRO20217Q6UXQ8 127 aa0.72□□□□□ -2.29
PMS1-203ENST00000409593 LRRC6Q86X45 466 aa0.72□□□□□ -2.29
PMS1-203ENST00000409593 CNEP1R1Q8N9A8 125 aa0.72□□□□□ -2.29
PMS1-203ENST00000409593 RAB1BQ9H0U4 201 aa0.72□□□□□ -2.29
PMS1-203ENST00000409593 MED28Q9H204 178 aa0.72□□□□□ -2.29
PMS1-203ENST00000409593 COMMD9Q9P000 198 aa0.72□□□□□ -2.29
PMS1-203ENST00000409593 HHLA3Q9XRX5 114 aa0.72□□□□□ -2.29
PMS1-203ENST00000409593 MACF1Q9UPN3 7388 aaKnown RBP0.72□□□□□ -2.29
PMS1-203ENST00000409593 DISP1Q96F81 1524 aa0.72□□□□□ -2.29
PMS1-203ENST00000409593 DSCAMO60469 2012 aa0.72□□□□□ -2.29
PMS1-203ENST00000409593 ZNF737O75373 536 aa0.72□□□□□ -2.29
PMS1-203ENST00000409593 PGLYRP1O75594 196 aaPredicted RBP0.72□□□□□ -2.29
PMS1-203ENST00000409593 BPGMP07738 259 aa0.72□□□□□ -2.29
PMS1-203ENST00000409593 CD7P09564 240 aa0.72□□□□□ -2.29
PMS1-203ENST00000409593 IL9P15248 144 aa0.72□□□□□ -2.29
PMS1-203ENST00000409593 TAS2R45P59539 299 aa0.72□□□□□ -2.29
PMS1-203ENST00000409593 C18orf21Q32NC0 220 aaPredicted RBP0.72□□□□□ -2.29
PMS1-203ENST00000409593 CYGBQ8WWM9 190 aa0.72□□□□□ -2.29
PMS1-203ENST00000409593 TAMM41Q96BW9 452 aa0.72□□□□□ -2.29
PMS1-203ENST00000409593 MAT2BQ9NZL9 334 aa0.72□□□□□ -2.29
PMS1-203ENST00000409593 A0A1B0GX12 115 aa0.71□□□□□ -2.3
PMS1-203ENST00000409593 M0QYV0 167 aa0.71□□□□□ -2.3
PMS1-203ENST00000409593 CTBP2P56545 445 aa0.71□□□□□ -2.3
PMS1-203ENST00000409593 LINC00313P59037 77 aa0.71□□□□□ -2.3
PMS1-203ENST00000409593 TNNC1P63316 161 aa0.71□□□□□ -2.3
PMS1-203ENST00000409593 XIAPP98170 497 aa0.71□□□□□ -2.3
PMS1-203ENST00000409593 PLCZ1Q86YW0 608 aa0.71□□□□□ -2.3
PMS1-203ENST00000409593 LRRC20Q8TCA0 184 aa0.71□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms